RNA–Protein interactions for RNA: ENST00000528762.1

BRCA2-203, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 4

Gene BRCA2, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-203ENST00000528762 JSRP1Q96MG2 331 aaPredicted RBP2.3□□□□□ -2.04
BRCA2-203ENST00000528762 COL21A1Q96P44 957 aa2.3□□□□□ -2.04
BRCA2-203ENST00000528762 SERPINB12Q96P63 405 aa2.3□□□□□ -2.04
BRCA2-203ENST00000528762 P2RX4Q99571 388 aa2.3□□□□□ -2.04
BRCA2-203ENST00000528762 YTHDF1Q9BYJ9 559 aaKnown RBP2.3□□□□□ -2.04
BRCA2-203ENST00000528762 UCK2Q9BZX2 261 aa2.3□□□□□ -2.04
BRCA2-203ENST00000528762 ACTR3CQ9C0K3 210 aaPredicted RBP2.3□□□□□ -2.04
BRCA2-203ENST00000528762 XKR8Q9H6D3 395 aa2.3□□□□□ -2.04
BRCA2-203ENST00000528762 RPF2Q9H7B2 306 aaKnown RBP2.3□□□□□ -2.04
BRCA2-203ENST00000528762 PXMP2Q9NR77 195 aa2.3□□□□□ -2.04
BRCA2-203ENST00000528762 MYEF2Q9P2K5 600 aaKnown RBP2.3□□□□□ -2.04
BRCA2-203ENST00000528762 SHPKQ9UHJ6 478 aa2.3□□□□□ -2.04
BRCA2-203ENST00000528762 OBSCNQ5VST9 7968 aa2.29□□□□□ -2.04
BRCA2-203ENST00000528762 CEMIPQ8WUJ3 1361 aa2.29□□□□□ -2.04
BRCA2-203ENST00000528762 CENPJQ9HC77 1338 aaPredicted RBP2.29□□□□□ -2.04
BRCA2-203ENST00000528762 MAPK8IP3Q9UPT6 1336 aa2.29□□□□□ -2.04
BRCA2-203ENST00000528762 TRAV39A0A0B4J263 110 aa2.29□□□□□ -2.04
BRCA2-203ENST00000528762 GLYATL1P3A0A0U1RQE8 302 aa2.29□□□□□ -2.04
BRCA2-203ENST00000528762 ERICH4A6NGS2 130 aa2.29□□□□□ -2.04
BRCA2-203ENST00000528762 H7C0C1 242 aa2.29□□□□□ -2.04
BRCA2-203ENST00000528762 K7EMT4 169 aa2.29□□□□□ -2.04
BRCA2-203ENST00000528762 NDUFS8O00217 210 aa2.29□□□□□ -2.04
BRCA2-203ENST00000528762 BCKDKO14874 412 aa2.29□□□□□ -2.04
BRCA2-203ENST00000528762 HDAC3O15379 428 aa2.29□□□□□ -2.04
BRCA2-203ENST00000528762 KLF8O95600 359 aaPredicted RBP2.29□□□□□ -2.04
BRCA2-203ENST00000528762 C6orf47O95873 294 aa2.29□□□□□ -2.04
BRCA2-203ENST00000528762 TGM6O95932 706 aa2.29□□□□□ -2.04
BRCA2-203ENST00000528762 HLA-HP01893 362 aa2.29□□□□□ -2.04
BRCA2-203ENST00000528762 CLTAP09496 248 aa2.29□□□□□ -2.04
BRCA2-203ENST00000528762 ACSM4P0C7M7 580 aa2.29□□□□□ -2.04
BRCA2-203ENST00000528762 MGMTP16455 207 aa2.29□□□□□ -2.04
BRCA2-203ENST00000528762 CFHR2P36980 270 aa2.29□□□□□ -2.04
BRCA2-203ENST00000528762 TNFSF9P41273 254 aa2.29□□□□□ -2.04
BRCA2-203ENST00000528762 SH3BGRP55822 239 aaPredicted RBP2.29□□□□□ -2.04
BRCA2-203ENST00000528762 LYZP61626 148 aa2.29□□□□□ -2.04
BRCA2-203ENST00000528762 NUTF2P61970 127 aaKnown RBP2.29□□□□□ -2.04
BRCA2-203ENST00000528762 RPS15AP62244 130 aaKnown RBP2.29□□□□□ -2.04
BRCA2-203ENST00000528762 XIAPP98170 497 aa2.29□□□□□ -2.04
BRCA2-203ENST00000528762 SLC25A11Q02978 314 aaKnown RBP2.29□□□□□ -2.04
BRCA2-203ENST00000528762 PRPSAP1Q14558 356 aa2.29□□□□□ -2.04
BRCA2-203ENST00000528762 TRAM2Q15035 370 aa2.29□□□□□ -2.04
BRCA2-203ENST00000528762 NCF4Q15080 339 aa2.29□□□□□ -2.04
BRCA2-203ENST00000528762 ZNF726P1Q15940 193 aa2.29□□□□□ -2.04
BRCA2-203ENST00000528762 IL17AQ16552 155 aa2.29□□□□□ -2.04
BRCA2-203ENST00000528762 RPEL1Q2QD12 228 aa2.29□□□□□ -2.04
BRCA2-203ENST00000528762 COA6Q5JTJ3 125 aaKnown RBP2.29□□□□□ -2.04
BRCA2-203ENST00000528762 LIN9Q5TKA1 542 aa2.29□□□□□ -2.04
BRCA2-203ENST00000528762 SPECC1LQ69YQ0 1117 aa2.29□□□□□ -2.04
BRCA2-203ENST00000528762 C16orf87Q6PH81 154 aa2.29□□□□□ -2.04
BRCA2-203ENST00000528762 C6orf89Q6UWU4 347 aa2.29□□□□□ -2.04
BRCA2-203ENST00000528762 IL34Q6ZMJ4 242 aa2.29□□□□□ -2.04
BRCA2-203ENST00000528762 H2AFVQ71UI9 128 aa2.29□□□□□ -2.04
BRCA2-203ENST00000528762 MRPL21Q7Z2W9 205 aaKnown RBP2.29□□□□□ -2.04
BRCA2-203ENST00000528762 CMTM8Q8IZV2 173 aa2.29□□□□□ -2.04
BRCA2-203ENST00000528762 MREGQ8N565 214 aa2.29□□□□□ -2.04
BRCA2-203ENST00000528762 JAGN1Q8N5M9 183 aa2.29□□□□□ -2.04
BRCA2-203ENST00000528762 C11orf42Q8N5U0 333 aa2.29□□□□□ -2.04
BRCA2-203ENST00000528762 C20orf203Q8NBC4 194 aa2.29□□□□□ -2.04
BRCA2-203ENST00000528762 OR10R2Q8NGX6 335 aa2.29□□□□□ -2.04
BRCA2-203ENST00000528762 OR5K2Q8NHB8 316 aa2.29□□□□□ -2.04
BRCA2-203ENST00000528762 MITD1Q8WV92 249 aa2.29□□□□□ -2.04
BRCA2-203ENST00000528762 CERS2Q96G23 380 aa2.29□□□□□ -2.04
BRCA2-203ENST00000528762 SLC7A5P2Q9GIP4 190 aa2.29□□□□□ -2.04
BRCA2-203ENST00000528762 EML4Q9HC35 981 aaKnown RBP2.29□□□□□ -2.04
BRCA2-203ENST00000528762 RETNQ9HD89 108 aa2.29□□□□□ -2.04
BRCA2-203ENST00000528762 MYOZ2Q9NPC6 264 aa2.29□□□□□ -2.04
BRCA2-203ENST00000528762 KCNJ16Q9NPI9 418 aa2.29□□□□□ -2.04
BRCA2-203ENST00000528762 CCL28Q9NRJ3 127 aa2.29□□□□□ -2.04
BRCA2-203ENST00000528762 SLC25A37Q9NYZ2 338 aa2.29□□□□□ -2.04
BRCA2-203ENST00000528762 HEBP2Q9Y5Z4 205 aa2.29□□□□□ -2.04
BRCA2-203ENST00000528762 LTBP1Q14766 1721 aa2.28□□□□□ -2.04
BRCA2-203ENST00000528762 WDR62O43379 1518 aa2.28□□□□□ -2.04
BRCA2-203ENST00000528762 A0A1W2PRD5 423 aa2.28□□□□□ -2.04
BRCA2-203ENST00000528762 TMEM120BA0PK00 339 aa2.28□□□□□ -2.04
BRCA2-203ENST00000528762 LYRM9A8MSI8 78 aa2.28□□□□□ -2.04
BRCA2-203ENST00000528762 SRP72O76094 671 aaKnown RBP2.28□□□□□ -2.04
BRCA2-203ENST00000528762 ACTL6AO96019 429 aa2.28□□□□□ -2.04
BRCA2-203ENST00000528762 IFNW1P05000 195 aa2.28□□□□□ -2.04
BRCA2-203ENST00000528762 SMIM10L1P0DMW3 83 aa2.28□□□□□ -2.04
BRCA2-203ENST00000528762 CRISP2P16562 243 aa2.28□□□□□ -2.04
BRCA2-203ENST00000528762 OR1E1P30953 314 aa2.28□□□□□ -2.04
BRCA2-203ENST00000528762 CTRLP40313 264 aa2.28□□□□□ -2.04
BRCA2-203ENST00000528762 NOVP48745 357 aa2.28□□□□□ -2.04
BRCA2-203ENST00000528762 BCAP31P51572 246 aa2.28□□□□□ -2.04
BRCA2-203ENST00000528762 CAV2P51636 162 aa2.28□□□□□ -2.04
BRCA2-203ENST00000528762 CCNG1P51959 295 aa2.28□□□□□ -2.04
BRCA2-203ENST00000528762 FGF8P55075 233 aaPredicted RBP2.28□□□□□ -2.04
BRCA2-203ENST00000528762 GGTLC2Q14390 218 aa2.28□□□□□ -2.04
BRCA2-203ENST00000528762 PSMD5Q16401 504 aa2.28□□□□□ -2.04
BRCA2-203ENST00000528762 RFX4Q33E94 735 aa2.28□□□□□ -2.04
BRCA2-203ENST00000528762 FBXO48Q5FWF7 155 aa2.28□□□□□ -2.04
BRCA2-203ENST00000528762 MLIPQ5VWP3 458 aa2.28□□□□□ -2.04
BRCA2-203ENST00000528762 LINC00336Q6ZUF6 198 aa2.28□□□□□ -2.04
BRCA2-203ENST00000528762 KRTAP5-2Q701N4 177 aa2.28□□□□□ -2.04
BRCA2-203ENST00000528762 ABHD13Q7L211 337 aa2.28□□□□□ -2.04
BRCA2-203ENST00000528762 TMEM150AQ86TG1 271 aa2.28□□□□□ -2.04
BRCA2-203ENST00000528762 CBLN2Q8IUK8 224 aa2.28□□□□□ -2.04
BRCA2-203ENST00000528762 FAM86B1Q8N7N1 296 aa2.28□□□□□ -2.04
BRCA2-203ENST00000528762 GATSQ8NAP1 163 aa2.28□□□□□ -2.04
BRCA2-203ENST00000528762 SUMF2Q8NBJ7 301 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms