RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 GDF3Q9NR23 364 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 SLC17A5Q9NRA2 495 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 IL36GQ9NZH8 169 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 KLRF1Q9NZS2 232 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 GHRLQ9UBU3 117 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 CLEC2DQ9UHP7 191 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 KIF25Q9UIL4 384 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 FKBP7Q9Y680 259 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 URGCP-MRPS24S4R325 110 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 PLIN4Q96Q06 1357 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 SIPA1L1O43166 1804 aa4.6□□□□□ -1.67
PCF11-202ENST00000528336 IGKV6D-41A0A0C4DH26 115 aa4.59□□□□□ -1.67
PCF11-202ENST00000528336 FER1L5A0AVI2 2057 aa4.59□□□□□ -1.67
PCF11-202ENST00000528336 PRAMEF26H0Y7S4 382 aa4.59□□□□□ -1.67
PCF11-202ENST00000528336 H3BQV1 296 aa4.59□□□□□ -1.67
PCF11-202ENST00000528336 K7EQG2 157 aa4.59□□□□□ -1.67
PCF11-202ENST00000528336 M0R3G1 203 aa4.59□□□□□ -1.67
PCF11-202ENST00000528336 SNAI2O43623 268 aa4.59□□□□□ -1.67
PCF11-202ENST00000528336 EFNA2O43921 213 aa4.59□□□□□ -1.67
PCF11-202ENST00000528336 FCN3O75636 299 aa4.59□□□□□ -1.67
PCF11-202ENST00000528336 IGHG4P01861 327 aa4.59□□□□□ -1.67
PCF11-202ENST00000528336 HMGCLP35914 325 aa4.59□□□□□ -1.67
PCF11-202ENST00000528336 SLC1A2P43004 574 aa4.59□□□□□ -1.67
PCF11-202ENST00000528336 MAGEA5P43359 124 aa4.59□□□□□ -1.67
PCF11-202ENST00000528336 CBX5P45973 191 aa4.59□□□□□ -1.67
PCF11-202ENST00000528336 RFX3P48380 749 aa4.59□□□□□ -1.67
PCF11-202ENST00000528336 ACTBP60709 375 aa4.59□□□□□ -1.67
PCF11-202ENST00000528336 ACTA2P62736 377 aa4.59□□□□□ -1.67
PCF11-202ENST00000528336 RPS27AP62979 156 aaKnown RBP4.59□□□□□ -1.67
PCF11-202ENST00000528336 ACTG1P63261 375 aa4.59□□□□□ -1.67
PCF11-202ENST00000528336 ACTG2P63267 376 aa4.59□□□□□ -1.67
PCF11-202ENST00000528336 ACTC1P68032 377 aa4.59□□□□□ -1.67
PCF11-202ENST00000528336 ACTA1P68133 377 aa4.59□□□□□ -1.67
PCF11-202ENST00000528336 KLRC3Q07444 240 aa4.59□□□□□ -1.67
PCF11-202ENST00000528336 SELENBP1Q13228 472 aa4.59□□□□□ -1.67
PCF11-202ENST00000528336 SERTAD2Q14140 314 aa4.59□□□□□ -1.67
PCF11-202ENST00000528336 PTPN20Q4JDL3 420 aa4.59□□□□□ -1.67
PCF11-202ENST00000528336 C9orf135Q5VTT2 229 aa4.59□□□□□ -1.67
PCF11-202ENST00000528336 C1orf189Q5VU69 101 aa4.59□□□□□ -1.67
PCF11-202ENST00000528336 SPINK14Q6IE38 97 aa4.59□□□□□ -1.67
PCF11-202ENST00000528336 TMPRSS11AQ6ZMR5 421 aa4.59□□□□□ -1.67
PCF11-202ENST00000528336 SLC16A14Q7RTX9 510 aa4.59□□□□□ -1.67
PCF11-202ENST00000528336 CARM1Q86X55 608 aa4.59□□□□□ -1.67
PCF11-202ENST00000528336 B3GNT7Q8NFL0 401 aa4.59□□□□□ -1.67
PCF11-202ENST00000528336 OR4F6Q8NGB9 312 aa4.59□□□□□ -1.67
PCF11-202ENST00000528336 GPR151Q8TDV0 419 aa4.59□□□□□ -1.67
PCF11-202ENST00000528336 ESR2Q92731 530 aa4.59□□□□□ -1.67
PCF11-202ENST00000528336 PNPLA2Q96AD5 504 aa4.59□□□□□ -1.67
PCF11-202ENST00000528336 NABP1Q96AH0 204 aa4.59□□□□□ -1.67
PCF11-202ENST00000528336 PCED1BQ96HM7 432 aa4.59□□□□□ -1.67
PCF11-202ENST00000528336 C9orf72Q96LT7 481 aa4.59□□□□□ -1.67
PCF11-202ENST00000528336 KCNA7Q96RP8 456 aa4.59□□□□□ -1.67
PCF11-202ENST00000528336 SLC6A7Q99884 636 aa4.59□□□□□ -1.67
PCF11-202ENST00000528336 SELENOSQ9BQE4 189 aa4.59□□□□□ -1.67
PCF11-202ENST00000528336 ZNF251Q9BRH9 671 aa4.59□□□□□ -1.67
PCF11-202ENST00000528336 SRRQ9GZT4 340 aa4.59□□□□□ -1.67
PCF11-202ENST00000528336 GBA3Q9H227 469 aa4.59□□□□□ -1.67
PCF11-202ENST00000528336 CXXC4Q9H2H0 198 aa4.59□□□□□ -1.67
PCF11-202ENST00000528336 NIPAL2Q9H841 368 aa4.59□□□□□ -1.67
PCF11-202ENST00000528336 WDR54Q9H977 334 aa4.59□□□□□ -1.67
PCF11-202ENST00000528336 NMRAL1Q9HBL8 299 aa4.59□□□□□ -1.67
PCF11-202ENST00000528336 DEPPQ9NTK1 212 aa4.59□□□□□ -1.67
PCF11-202ENST00000528336 NECAP2Q9NVZ3 263 aa4.59□□□□□ -1.67
PCF11-202ENST00000528336 PAQR5Q9NXK6 330 aaPredicted RBP4.59□□□□□ -1.67
PCF11-202ENST00000528336 MRPL39Q9NYK5 338 aaKnown RBP4.59□□□□□ -1.67
PCF11-202ENST00000528336 ZNF221Q9UK13 617 aa4.59□□□□□ -1.67
PCF11-202ENST00000528336 PLLPQ9Y342 182 aa4.59□□□□□ -1.67
PCF11-202ENST00000528336 SAMHD1Q9Y3Z3 626 aaKnown RBP4.59□□□□□ -1.67
PCF11-202ENST00000528336 OTOFQ9HC10 1997 aa4.58□□□□□ -1.68
PCF11-202ENST00000528336 MYH1P12882 1939 aa4.58□□□□□ -1.68
PCF11-202ENST00000528336 BAZ2AQ9UIF9 1905 aaKnown RBP4.58□□□□□ -1.68
PCF11-202ENST00000528336 RPL37AP8A6NKH3 93 aa4.58□□□□□ -1.68
PCF11-202ENST00000528336 F5H6K3 240 aa4.58□□□□□ -1.68
PCF11-202ENST00000528336 LIN7AO14910 233 aaPredicted RBP4.58□□□□□ -1.68
PCF11-202ENST00000528336 MSH4O15457 936 aa4.58□□□□□ -1.68
PCF11-202ENST00000528336 XRCC2O43543 280 aa4.58□□□□□ -1.68
PCF11-202ENST00000528336 SH3BGRLO75368 114 aa4.58□□□□□ -1.68
PCF11-202ENST00000528336 GPX5O75715 221 aa4.58□□□□□ -1.68
PCF11-202ENST00000528336 DIRAS1O95057 198 aa4.58□□□□□ -1.68
PCF11-202ENST00000528336 CTXN2P0C2S0 81 aa4.58□□□□□ -1.68
PCF11-202ENST00000528336 BCKDHBP21953 392 aa4.58□□□□□ -1.68
PCF11-202ENST00000528336 UGT1A3P35503 534 aa4.58□□□□□ -1.68
PCF11-202ENST00000528336 SLC26A3P40879 764 aa4.58□□□□□ -1.68
PCF11-202ENST00000528336 ID1P41134 155 aa4.58□□□□□ -1.68
PCF11-202ENST00000528336 CSKP41240 450 aa4.58□□□□□ -1.68
PCF11-202ENST00000528336 NOVP48745 357 aa4.58□□□□□ -1.68
PCF11-202ENST00000528336 CCR8P51685 355 aa4.58□□□□□ -1.68
PCF11-202ENST00000528336 CHRNB3Q05901 458 aa4.58□□□□□ -1.68
PCF11-202ENST00000528336 STX5Q13190 355 aa4.58□□□□□ -1.68
PCF11-202ENST00000528336 ZBTB6Q15916 424 aa4.58□□□□□ -1.68
PCF11-202ENST00000528336 TNXAQ16473 311 aa4.58□□□□□ -1.68
PCF11-202ENST00000528336 ISXQ2M1V0 245 aa4.58□□□□□ -1.68
PCF11-202ENST00000528336 KLHL38Q2WGJ6 581 aa4.58□□□□□ -1.68
PCF11-202ENST00000528336 UTF1Q5T230 341 aa4.58□□□□□ -1.68
PCF11-202ENST00000528336 LANCL3Q6ZV70 420 aa4.58□□□□□ -1.68
PCF11-202ENST00000528336 STOX1Q6ZVD7 989 aa4.58□□□□□ -1.68
PCF11-202ENST00000528336 NIPA1Q7RTP0 329 aa4.58□□□□□ -1.68
PCF11-202ENST00000528336 C4orf32Q8N8J7 132 aa4.58□□□□□ -1.68
PCF11-202ENST00000528336 LGALS14Q8TCE9 139 aa4.58□□□□□ -1.68
PCF11-202ENST00000528336 C18orf25Q96B23 403 aaPredicted RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms