RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 MSMPQ1L6U9 139 aa8.99□□□□□ -0.97
CPSF1-203ENST00000527916 GKAP1Q5VSY0 366 aaPredicted RBP8.99□□□□□ -0.97
CPSF1-203ENST00000527916 ACSM5Q6NUN0 579 aa8.99□□□□□ -0.97
CPSF1-203ENST00000527916 TMEM53Q6P2H8 277 aa8.99□□□□□ -0.97
CPSF1-203ENST00000527916 C1orf229Q6ZS94 237 aaPredicted RBP8.99□□□□□ -0.97
CPSF1-203ENST00000527916 SLC16A14Q7RTX9 510 aa8.99□□□□□ -0.97
CPSF1-203ENST00000527916 OFCC1Q8IZS5 231 aa8.99□□□□□ -0.97
CPSF1-203ENST00000527916 POU5F2Q8N7G0 328 aa8.99□□□□□ -0.97
CPSF1-203ENST00000527916 NOXO1Q8NFA2 376 aa8.99□□□□□ -0.97
CPSF1-203ENST00000527916 OR4K5Q8NGD3 323 aa8.99□□□□□ -0.97
CPSF1-203ENST00000527916 OR1J2Q8NGS2 313 aa8.99□□□□□ -0.97
CPSF1-203ENST00000527916 MOSPD2Q8NHP6 518 aa8.99□□□□□ -0.97
CPSF1-203ENST00000527916 GEMIN6Q8WXD5 167 aaKnown RBP8.99□□□□□ -0.97
CPSF1-203ENST00000527916 NMD3Q96D46 503 aaKnown RBP8.99□□□□□ -0.97
CPSF1-203ENST00000527916 SH3GL3Q99963 347 aa8.99□□□□□ -0.97
CPSF1-203ENST00000527916 ZNF416Q9BWM5 594 aa8.99□□□□□ -0.97
CPSF1-203ENST00000527916 KCNN2Q9H2S1 579 aa8.99□□□□□ -0.97
CPSF1-203ENST00000527916 RNF121Q9H920 327 aa8.99□□□□□ -0.97
CPSF1-203ENST00000527916 UNKLQ9H9P5 680 aaKnown RBP8.99□□□□□ -0.97
CPSF1-203ENST00000527916 ZMAT3Q9HA38 289 aaKnown RBP8.99□□□□□ -0.97
CPSF1-203ENST00000527916 REV1Q9UBZ9 1251 aa8.99□□□□□ -0.97
CPSF1-203ENST00000527916 CXCR6O00574 342 aa8.98□□□□□ -0.97
CPSF1-203ENST00000527916 NME4O00746 187 aa8.98□□□□□ -0.97
CPSF1-203ENST00000527916 FFAR1O14842 300 aa8.98□□□□□ -0.97
CPSF1-203ENST00000527916 PRSS23O95084 383 aa8.98□□□□□ -0.97
CPSF1-203ENST00000527916 AVPP01185 164 aa8.98□□□□□ -0.97
CPSF1-203ENST00000527916 IFI30P13284 250 aa8.98□□□□□ -0.97
CPSF1-203ENST00000527916 ZNF250P15622 560 aa8.98□□□□□ -0.97
CPSF1-203ENST00000527916 RAD52P43351 418 aa8.98□□□□□ -0.97
CPSF1-203ENST00000527916 SLC9A3P48764 834 aa8.98□□□□□ -0.97
CPSF1-203ENST00000527916 SELENOVP59797 346 aa8.98□□□□□ -0.97
CPSF1-203ENST00000527916 RPL27P61353 136 aaKnown RBP8.98□□□□□ -0.97
CPSF1-203ENST00000527916 LMO4P61968 165 aa8.98□□□□□ -0.97
CPSF1-203ENST00000527916 IL13RA1P78552 427 aa8.98□□□□□ -0.97
CPSF1-203ENST00000527916 MRPS11P82912 194 aaKnown RBP8.98□□□□□ -0.97
CPSF1-203ENST00000527916 PLP2Q04941 152 aa8.98□□□□□ -0.97
CPSF1-203ENST00000527916 IFI44LQ53G44 452 aa8.98□□□□□ -0.97
CPSF1-203ENST00000527916 ALG10Q5BKT4 473 aa8.98□□□□□ -0.97
CPSF1-203ENST00000527916 ELFN2Q5R3F8 820 aa8.98□□□□□ -0.97
CPSF1-203ENST00000527916 THEM4Q5T1C6 240 aa8.98□□□□□ -0.97
CPSF1-203ENST00000527916 FAM27BQ5VT28 67 aa8.98□□□□□ -0.97
CPSF1-203ENST00000527916 FAM205BPQ63HN1 556 aa8.98□□□□□ -0.97
CPSF1-203ENST00000527916 HIST2H2BDQ6DRA6 164 aa8.98□□□□□ -0.97
CPSF1-203ENST00000527916 SLC25A47Q6Q0C1 308 aa8.98□□□□□ -0.97
CPSF1-203ENST00000527916 VTCN1Q7Z7D3 282 aa8.98□□□□□ -0.97
CPSF1-203ENST00000527916 TREML1Q86YW5 311 aa8.98□□□□□ -0.97
CPSF1-203ENST00000527916 LRRC75AQ8NAA5 344 aa8.98□□□□□ -0.97
CPSF1-203ENST00000527916 SYT14Q8NB59 555 aa8.98□□□□□ -0.97
CPSF1-203ENST00000527916 FAM156AQ8NDB6 213 aa8.98□□□□□ -0.97
CPSF1-203ENST00000527916 SLC30A7Q8NEW0 376 aa8.98□□□□□ -0.97
CPSF1-203ENST00000527916 ACOT11Q8WXI4 607 aaPredicted RBP8.98□□□□□ -0.97
CPSF1-203ENST00000527916 HDAC2Q92769 488 aaKnown RBP8.98□□□□□ -0.97
CPSF1-203ENST00000527916 RAB39BQ96DA2 213 aa8.98□□□□□ -0.97
CPSF1-203ENST00000527916 CMTM5Q96DZ9 223 aa8.98□□□□□ -0.97
CPSF1-203ENST00000527916 RBP7Q96R05 134 aa8.98□□□□□ -0.97
CPSF1-203ENST00000527916 ALG12Q9BV10 488 aa8.98□□□□□ -0.97
CPSF1-203ENST00000527916 FNDC11Q9BVV2 318 aa8.98□□□□□ -0.97
CPSF1-203ENST00000527916 LRMDAQ9H2I8 198 aa8.98□□□□□ -0.97
CPSF1-203ENST00000527916 ANKRD19PQ9H560 264 aa8.98□□□□□ -0.97
CPSF1-203ENST00000527916 G6PC2Q9NQR9 355 aa8.98□□□□□ -0.97
CPSF1-203ENST00000527916 MAN2C1Q9NTJ4 1040 aa8.98□□□□□ -0.97
CPSF1-203ENST00000527916 ABCD2Q9UBJ2 740 aa8.98□□□□□ -0.97
CPSF1-203ENST00000527916 GPR160Q9UJ42 338 aa8.98□□□□□ -0.97
CPSF1-203ENST00000527916 ZNF346Q9UL40 294 aaKnown RBP8.98□□□□□ -0.97
CPSF1-203ENST00000527916 PPIAL4AQ9Y536 164 aa8.98□□□□□ -0.97
CPSF1-203ENST00000527916 IGLV3-9A0A075B6K5 115 aa8.97□□□□□ -0.97
CPSF1-203ENST00000527916 A0A087WUU8 490 aa8.97□□□□□ -0.97
CPSF1-203ENST00000527916 IQCMA0A1B0GVH7 501 aa8.97□□□□□ -0.97
CPSF1-203ENST00000527916 A6NIZ1 184 aa8.97□□□□□ -0.97
CPSF1-203ENST00000527916 GSTA4O15217 222 aa8.97□□□□□ -0.97
CPSF1-203ENST00000527916 AHCYL1O43865 530 aa8.97□□□□□ -0.97
CPSF1-203ENST00000527916 MPZL1O95297 269 aa8.97□□□□□ -0.97
CPSF1-203ENST00000527916 MAKP20794 623 aa8.97□□□□□ -0.97
CPSF1-203ENST00000527916 GATA3P23771 443 aa8.97□□□□□ -0.97
CPSF1-203ENST00000527916 PRTN3P24158 256 aa8.97□□□□□ -0.97
CPSF1-203ENST00000527916 COL8A2P25067 703 aa8.97□□□□□ -0.97
CPSF1-203ENST00000527916 ZFP36P26651 326 aaKnown RBP8.97□□□□□ -0.97
CPSF1-203ENST00000527916 PRDX6P30041 224 aa8.97□□□□□ -0.97
CPSF1-203ENST00000527916 GSK3BP49841 420 aa8.97□□□□□ -0.97
CPSF1-203ENST00000527916 SLC7A2P52569 658 aa8.97□□□□□ -0.97
CPSF1-203ENST00000527916 UCP2P55851 309 aa8.97□□□□□ -0.97
CPSF1-203ENST00000527916 CTXN1P60606 82 aa8.97□□□□□ -0.97
CPSF1-203ENST00000527916 RAP1BP61224 184 aa8.97□□□□□ -0.97
CPSF1-203ENST00000527916 RAP1AP62834 184 aa8.97□□□□□ -0.97
CPSF1-203ENST00000527916 FHL1Q13642 323 aa8.97□□□□□ -0.97
CPSF1-203ENST00000527916 TBC1D28Q2M2D7 210 aa8.97□□□□□ -0.97
CPSF1-203ENST00000527916 DCAF12L2Q5VW00 463 aa8.97□□□□□ -0.97
CPSF1-203ENST00000527916 RGS7BPQ6MZT1 257 aaPredicted RBP8.97□□□□□ -0.97
CPSF1-203ENST00000527916 TMPRSS11FQ6ZWK6 438 aa8.97□□□□□ -0.97
CPSF1-203ENST00000527916 FKBP9P1Q75LS8 142 aa8.97□□□□□ -0.97
CPSF1-203ENST00000527916 OAFQ86UD1 273 aa8.97□□□□□ -0.97
CPSF1-203ENST00000527916 NRMQ8IXM6 262 aa8.97□□□□□ -0.97
CPSF1-203ENST00000527916 C1orf174Q8IYL3 243 aa8.97□□□□□ -0.97
CPSF1-203ENST00000527916 RBM15BQ8NDT2 890 aaKnown RBP8.97□□□□□ -0.97
CPSF1-203ENST00000527916 ZNF519Q8TB69 540 aa8.97□□□□□ -0.97
CPSF1-203ENST00000527916 C11orf40Q8WZ69 217 aa8.97□□□□□ -0.97
CPSF1-203ENST00000527916 NABP1Q96AH0 204 aa8.97□□□□□ -0.97
CPSF1-203ENST00000527916 WACQ9BTA9 647 aa8.97□□□□□ -0.97
CPSF1-203ENST00000527916 TMPRSS13Q9BYE2 586 aa8.97□□□□□ -0.97
CPSF1-203ENST00000527916 BCL2L14Q9BZR8 327 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms