RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 FAM205BPQ63HN1 556 aa12.19□□□□□ -0.46
CAPN1-212ENST00000527887 RGS7BPQ6MZT1 257 aaPredicted RBP12.19□□□□□ -0.46
CAPN1-212ENST00000527887 RNF113BQ8IZP6 322 aaKnown RBP12.19□□□□□ -0.46
CAPN1-212ENST00000527887 LINC01356Q8N9X3 169 aa12.19□□□□□ -0.46
CAPN1-212ENST00000527887 PAPD5Q8NDF8 572 aaKnown RBP12.19□□□□□ -0.46
CAPN1-212ENST00000527887 PFN4Q8NHR9 129 aa12.19□□□□□ -0.46
CAPN1-212ENST00000527887 FGFBP3Q8TAT2 258 aa12.19□□□□□ -0.46
CAPN1-212ENST00000527887 C11orf40Q8WZ69 217 aa12.19□□□□□ -0.46
CAPN1-212ENST00000527887 PRRC1Q96M27 445 aa12.19□□□□□ -0.46
CAPN1-212ENST00000527887 ZNF347Q96SE7 839 aa12.19□□□□□ -0.46
CAPN1-212ENST00000527887 SYT3Q9BQG1 590 aa12.19□□□□□ -0.46
CAPN1-212ENST00000527887 TPK1Q9H3S4 243 aa12.19□□□□□ -0.46
CAPN1-212ENST00000527887 C20orf141Q9NUB4 165 aa12.19□□□□□ -0.46
CAPN1-212ENST00000527887 ARMC1Q9NVT9 282 aa12.19□□□□□ -0.46
CAPN1-212ENST00000527887 SLCO1C1Q9NYB5 712 aa12.19□□□□□ -0.46
CAPN1-212ENST00000527887 IGLV3-9A0A075B6K5 115 aa12.18□□□□□ -0.46
CAPN1-212ENST00000527887 A0A1W2PPW3 197 aa12.18□□□□□ -0.46
CAPN1-212ENST00000527887 PHF1O43189 567 aaPredicted RBP12.18□□□□□ -0.46
CAPN1-212ENST00000527887 TNFRSF1BP20333 461 aa12.18□□□□□ -0.46
CAPN1-212ENST00000527887 APLNRP35414 380 aa12.18□□□□□ -0.46
CAPN1-212ENST00000527887 GUCA1AP43080 201 aaPredicted RBP12.18□□□□□ -0.46
CAPN1-212ENST00000527887 UCP2P55851 309 aa12.18□□□□□ -0.46
CAPN1-212ENST00000527887 SLC34A1Q06495 639 aa12.18□□□□□ -0.46
CAPN1-212ENST00000527887 PCGF3Q3KNV8 242 aa12.18□□□□□ -0.46
CAPN1-212ENST00000527887 ALG10Q5BKT4 473 aa12.18□□□□□ -0.46
CAPN1-212ENST00000527887 ELFN2Q5R3F8 820 aa12.18□□□□□ -0.46
CAPN1-212ENST00000527887 THEM4Q5T1C6 240 aa12.18□□□□□ -0.46
CAPN1-212ENST00000527887 GLYATQ6IB77 296 aa12.18□□□□□ -0.46
CAPN1-212ENST00000527887 SYT14Q8NB59 555 aa12.18□□□□□ -0.46
CAPN1-212ENST00000527887 FAM156AQ8NDB6 213 aa12.18□□□□□ -0.46
CAPN1-212ENST00000527887 SYNPRQ8TBG9 265 aa12.18□□□□□ -0.46
CAPN1-212ENST00000527887 BPIFA2Q96DR5 249 aa12.18□□□□□ -0.46
CAPN1-212ENST00000527887 RSRC1Q96IZ7 334 aaKnown RBP12.18□□□□□ -0.46
CAPN1-212ENST00000527887 TPD52L3Q96J77 140 aa12.18□□□□□ -0.46
CAPN1-212ENST00000527887 RBP7Q96R05 134 aa12.18□□□□□ -0.46
CAPN1-212ENST00000527887 WACQ9BTA9 647 aa12.18□□□□□ -0.46
CAPN1-212ENST00000527887 ALG12Q9BV10 488 aa12.18□□□□□ -0.46
CAPN1-212ENST00000527887 ZNF416Q9BWM5 594 aa12.18□□□□□ -0.46
CAPN1-212ENST00000527887 NKIRAS2Q9NYR9 191 aa12.18□□□□□ -0.46
CAPN1-212ENST00000527887 A4GNTQ9UNA3 340 aa12.18□□□□□ -0.46
CAPN1-212ENST00000527887 LRP5LA4QPB2 252 aa12.17□□□□□ -0.46
CAPN1-212ENST00000527887 B4DSR2 109 aa12.17□□□□□ -0.46
CAPN1-212ENST00000527887 GSTA4O15217 222 aa12.17□□□□□ -0.46
CAPN1-212ENST00000527887 MT-ND5P03915 603 aa12.17□□□□□ -0.46
CAPN1-212ENST00000527887 IFNW1P05000 195 aa12.17□□□□□ -0.46
CAPN1-212ENST00000527887 MMP7P09237 267 aaPredicted RBP12.17□□□□□ -0.46
CAPN1-212ENST00000527887 ALDH3B1P43353 468 aa12.17□□□□□ -0.46
CAPN1-212ENST00000527887 GPR6P46095 362 aaPredicted RBP12.17□□□□□ -0.46
CAPN1-212ENST00000527887 CDH15P55291 814 aa12.17□□□□□ -0.46
CAPN1-212ENST00000527887 KLF3P57682 345 aaPredicted RBP12.17□□□□□ -0.46
CAPN1-212ENST00000527887 TEKQ02763 1124 aa12.17□□□□□ -0.46
CAPN1-212ENST00000527887 HSF2Q03933 536 aa12.17□□□□□ -0.46
CAPN1-212ENST00000527887 LAPTM4AQ15012 233 aa12.17□□□□□ -0.46
CAPN1-212ENST00000527887 TRAM2Q15035 370 aa12.17□□□□□ -0.46
CAPN1-212ENST00000527887 RCN1Q15293 331 aa12.17□□□□□ -0.46
CAPN1-212ENST00000527887 NKPD1Q17RQ9 610 aa12.17□□□□□ -0.46
CAPN1-212ENST00000527887 FAM209AQ5JX71 171 aa12.17□□□□□ -0.46
CAPN1-212ENST00000527887 FKBP9P1Q75LS8 142 aa12.17□□□□□ -0.46
CAPN1-212ENST00000527887 LRP11Q86VZ4 500 aa12.17□□□□□ -0.46
CAPN1-212ENST00000527887 SPATA24Q86W54 205 aa12.17□□□□□ -0.46
CAPN1-212ENST00000527887 OFCC1Q8IZS5 231 aa12.17□□□□□ -0.46
CAPN1-212ENST00000527887 ARIH2OSQ8N7S6 290 aa12.17□□□□□ -0.46
CAPN1-212ENST00000527887 MOSPD2Q8NHP6 518 aa12.17□□□□□ -0.46
CAPN1-212ENST00000527887 SNX33Q8WV41 574 aa12.17□□□□□ -0.46
CAPN1-212ENST00000527887 NMD3Q96D46 503 aaKnown RBP12.17□□□□□ -0.46
CAPN1-212ENST00000527887 NSMCE2Q96MF7 247 aa12.17□□□□□ -0.46
CAPN1-212ENST00000527887 CCNB1IP1Q9NPC3 277 aa12.17□□□□□ -0.46
CAPN1-212ENST00000527887 HINT3Q9NQE9 182 aaKnown RBP12.17□□□□□ -0.46
CAPN1-212ENST00000527887 AP4S1Q9Y587 144 aa12.17□□□□□ -0.46
CAPN1-212ENST00000527887 A6NIZ1 184 aa12.16□□□□□ -0.46
CAPN1-212ENST00000527887 C17orf100A8MU93 164 aa12.16□□□□□ -0.46
CAPN1-212ENST00000527887 H3BNX3 289 aa12.16□□□□□ -0.46
CAPN1-212ENST00000527887 KRT36O76013 467 aa12.16□□□□□ -0.46
CAPN1-212ENST00000527887 IGHMP01871 453 aa12.16□□□□□ -0.46
CAPN1-212ENST00000527887 TFP02787 698 aa12.16□□□□□ -0.46
CAPN1-212ENST00000527887 HPXP02790 462 aa12.16□□□□□ -0.46
CAPN1-212ENST00000527887 LCKP06239 509 aa12.16□□□□□ -0.46
CAPN1-212ENST00000527887 FCGR1AP12314 374 aa12.16□□□□□ -0.46
CAPN1-212ENST00000527887 IFI30P13284 250 aa12.16□□□□□ -0.46
CAPN1-212ENST00000527887 ANPEPP15144 967 aa12.16□□□□□ -0.46
CAPN1-212ENST00000527887 MSX2P35548 267 aaPredicted RBP12.16□□□□□ -0.46
CAPN1-212ENST00000527887 SLC9A3P48764 834 aa12.16□□□□□ -0.46
CAPN1-212ENST00000527887 DVL1P1P54792 670 aaPredicted RBP12.16□□□□□ -0.46
CAPN1-212ENST00000527887 RAP1BP61224 184 aa12.16□□□□□ -0.46
CAPN1-212ENST00000527887 RPL27P61353 136 aaKnown RBP12.16□□□□□ -0.46
CAPN1-212ENST00000527887 PCBD1P61457 104 aa12.16□□□□□ -0.46
CAPN1-212ENST00000527887 RAP1AP62834 184 aa12.16□□□□□ -0.46
CAPN1-212ENST00000527887 MYBPC1Q00872 1141 aa12.16□□□□□ -0.46
CAPN1-212ENST00000527887 CD47Q08722 323 aa12.16□□□□□ -0.46
CAPN1-212ENST00000527887 CR1LQ2VPA4 569 aa12.16□□□□□ -0.46
CAPN1-212ENST00000527887 FAM27BQ5VT28 67 aa12.16□□□□□ -0.46
CAPN1-212ENST00000527887 TMEM154Q6P9G4 183 aa12.16□□□□□ -0.46
CAPN1-212ENST00000527887 SLC25A47Q6Q0C1 308 aa12.16□□□□□ -0.46
CAPN1-212ENST00000527887 PHC2Q8IXK0 858 aa12.16□□□□□ -0.46
CAPN1-212ENST00000527887 ALDH16A1Q8IZ83 802 aa12.16□□□□□ -0.46
CAPN1-212ENST00000527887 LRRC18Q8N456 261 aa12.16□□□□□ -0.46
CAPN1-212ENST00000527887 GEMIN6Q8WXD5 167 aaKnown RBP12.16□□□□□ -0.46
CAPN1-212ENST00000527887 HDAC2Q92769 488 aaKnown RBP12.16□□□□□ -0.46
CAPN1-212ENST00000527887 SNX18Q96RF0 628 aa12.16□□□□□ -0.46
CAPN1-212ENST00000527887 FNDC11Q9BVV2 318 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms