RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 LSP1P33241 339 aa8.92□□□□□ -0.98
PRPF40B-204ENST00000527253 LIMS1P48059 325 aa8.92□□□□□ -0.98
PRPF40B-204ENST00000527253 FXYD6P3P58550 94 aa8.92□□□□□ -0.98
PRPF40B-204ENST00000527253 HSF2Q03933 536 aa8.92□□□□□ -0.98
PRPF40B-204ENST00000527253 PLP2Q04941 152 aa8.92□□□□□ -0.98
PRPF40B-204ENST00000527253 SEC23BQ15437 767 aa8.92□□□□□ -0.98
PRPF40B-204ENST00000527253 TBC1D28Q2M2D7 210 aa8.92□□□□□ -0.98
PRPF40B-204ENST00000527253 ZBED5Q49AG3 693 aa8.92□□□□□ -0.98
PRPF40B-204ENST00000527253 MESTQ5EB52 335 aa8.92□□□□□ -0.98
PRPF40B-204ENST00000527253 FAM120AOSQ5T036 256 aa8.92□□□□□ -0.98
PRPF40B-204ENST00000527253 THEM4Q5T1C6 240 aa8.92□□□□□ -0.98
PRPF40B-204ENST00000527253 OTPQ5XKR4 325 aa8.92□□□□□ -0.98
PRPF40B-204ENST00000527253 FAM166AQ6J272 317 aa8.92□□□□□ -0.98
PRPF40B-204ENST00000527253 FAM122BQ7Z309 247 aa8.92□□□□□ -0.98
PRPF40B-204ENST00000527253 ZNF101Q8IZC7 436 aa8.92□□□□□ -0.98
PRPF40B-204ENST00000527253 OR1J2Q8NGS2 313 aa8.92□□□□□ -0.98
PRPF40B-204ENST00000527253 SYNPRQ8TBG9 265 aa8.92□□□□□ -0.98
PRPF40B-204ENST00000527253 CMTM5Q96DZ9 223 aa8.92□□□□□ -0.98
PRPF40B-204ENST00000527253 C1orf159Q96HA4 380 aa8.92□□□□□ -0.98
PRPF40B-204ENST00000527253 FAM46AQ96IP4 442 aaKnown RBP8.92□□□□□ -0.98
PRPF40B-204ENST00000527253 Q96M85 177 aa8.92□□□□□ -0.98
PRPF40B-204ENST00000527253 RBP7Q96R05 134 aa8.92□□□□□ -0.98
PRPF40B-204ENST00000527253 SNX18Q96RF0 628 aa8.92□□□□□ -0.98
PRPF40B-204ENST00000527253 GPA33Q99795 319 aa8.92□□□□□ -0.98
PRPF40B-204ENST00000527253 FUZQ9BT04 418 aa8.92□□□□□ -0.98
PRPF40B-204ENST00000527253 BEX2Q9BXY8 128 aa8.92□□□□□ -0.98
PRPF40B-204ENST00000527253 OR2H1Q9GZK4 316 aa8.92□□□□□ -0.98
PRPF40B-204ENST00000527253 RACGAP1Q9H0H5 632 aa8.92□□□□□ -0.98
PRPF40B-204ENST00000527253 C1orf198Q9H425 327 aa8.92□□□□□ -0.98
PRPF40B-204ENST00000527253 DCAF13Q9NV06 445 aaKnown RBP8.92□□□□□ -0.98
PRPF40B-204ENST00000527253 CUBNO60494 3623 aa8.92□□□□□ -0.98
PRPF40B-204ENST00000527253 TRBV4-1A0A0J9YWV2 114 aa8.91□□□□□ -0.98
PRPF40B-204ENST00000527253 A0A1W2PRQ8 180 aa8.91□□□□□ -0.98
PRPF40B-204ENST00000527253 A6NIZ1 184 aa8.91□□□□□ -0.98
PRPF40B-204ENST00000527253 C17orf100A8MU93 164 aa8.91□□□□□ -0.98
PRPF40B-204ENST00000527253 NDUFAB1O14561 156 aa8.91□□□□□ -0.98
PRPF40B-204ENST00000527253 RP2O75695 350 aa8.91□□□□□ -0.98
PRPF40B-204ENST00000527253 NGFP01138 241 aa8.91□□□□□ -0.98
PRPF40B-204ENST00000527253 PTHP01270 115 aa8.91□□□□□ -0.98
PRPF40B-204ENST00000527253 SEMG1P04279 462 aa8.91□□□□□ -0.98
PRPF40B-204ENST00000527253 H1F0P07305 194 aaKnown RBP8.91□□□□□ -0.98
PRPF40B-204ENST00000527253 CST2P09228 141 aa8.91□□□□□ -0.98
PRPF40B-204ENST00000527253 CCNOP22674 350 aa8.91□□□□□ -0.98
PRPF40B-204ENST00000527253 APLNRP35414 380 aa8.91□□□□□ -0.98
PRPF40B-204ENST00000527253 MSX2P35548 267 aaPredicted RBP8.91□□□□□ -0.98
PRPF40B-204ENST00000527253 MPV17P39210 176 aa8.91□□□□□ -0.98
PRPF40B-204ENST00000527253 RAD52P43351 418 aa8.91□□□□□ -0.98
PRPF40B-204ENST00000527253 OMPP47874 163 aa8.91□□□□□ -0.98
PRPF40B-204ENST00000527253 SLC9A3P48764 834 aa8.91□□□□□ -0.98
PRPF40B-204ENST00000527253 CHN2P52757 468 aa8.91□□□□□ -0.98
PRPF40B-204ENST00000527253 RAP1BP61224 184 aa8.91□□□□□ -0.98
PRPF40B-204ENST00000527253 RAP1AP62834 184 aa8.91□□□□□ -0.98
PRPF40B-204ENST00000527253 SRSF2Q01130 221 aaKnown RBP8.91□□□□□ -0.98
PRPF40B-204ENST00000527253 GLO1Q04760 184 aa8.91□□□□□ -0.98
PRPF40B-204ENST00000527253 DGCR6Q14129 220 aa8.91□□□□□ -0.98
PRPF40B-204ENST00000527253 ANKDD1AQ495B1 522 aa8.91□□□□□ -0.98
PRPF40B-204ENST00000527253 SPATA46Q5T0L3 261 aa8.91□□□□□ -0.98
PRPF40B-204ENST00000527253 FAM205BPQ63HN1 556 aa8.91□□□□□ -0.98
PRPF40B-204ENST00000527253 ZNF774Q6NX45 483 aa8.91□□□□□ -0.98
PRPF40B-204ENST00000527253 THSD4Q6ZMP0 1018 aa8.91□□□□□ -0.98
PRPF40B-204ENST00000527253 ICA1LQ8NDH6 482 aa8.91□□□□□ -0.98
PRPF40B-204ENST00000527253 OR1J1Q8NGS3 322 aa8.91□□□□□ -0.98
PRPF40B-204ENST00000527253 C11orf40Q8WZ69 217 aa8.91□□□□□ -0.98
PRPF40B-204ENST00000527253 RDH5Q92781 318 aa8.91□□□□□ -0.98
PRPF40B-204ENST00000527253 HPS1Q92902 700 aa8.91□□□□□ -0.98
PRPF40B-204ENST00000527253 DHRS1Q96LJ7 313 aa8.91□□□□□ -0.98
PRPF40B-204ENST00000527253 ZNF416Q9BWM5 594 aa8.91□□□□□ -0.98
PRPF40B-204ENST00000527253 BCL2L14Q9BZR8 327 aa8.91□□□□□ -0.98
PRPF40B-204ENST00000527253 SHARPINQ9H0F6 387 aa8.91□□□□□ -0.98
PRPF40B-204ENST00000527253 ANKRD19PQ9H560 264 aa8.91□□□□□ -0.98
PRPF40B-204ENST00000527253 EMC7Q9NPA0 242 aa8.91□□□□□ -0.98
PRPF40B-204ENST00000527253 CCNB1IP1Q9NPC3 277 aa8.91□□□□□ -0.98
PRPF40B-204ENST00000527253 SPAG4Q9NPE6 437 aa8.91□□□□□ -0.98
PRPF40B-204ENST00000527253 HINT3Q9NQE9 182 aaKnown RBP8.91□□□□□ -0.98
PRPF40B-204ENST00000527253 POLE4Q9NR33 117 aa8.91□□□□□ -0.98
PRPF40B-204ENST00000527253 ZNF275Q9NSD4 429 aaPredicted RBP8.91□□□□□ -0.98
PRPF40B-204ENST00000527253 ARL8BQ9NVJ2 186 aa8.91□□□□□ -0.98
PRPF40B-204ENST00000527253 ADA2Q9NZK5 511 aa8.91□□□□□ -0.98
PRPF40B-204ENST00000527253 CD300AQ9UGN4 299 aa8.91□□□□□ -0.98
PRPF40B-204ENST00000527253 RPS6KA6Q9UK32 745 aa8.91□□□□□ -0.98
PRPF40B-204ENST00000527253 KCNS2Q9ULS6 477 aa8.91□□□□□ -0.98
PRPF40B-204ENST00000527253 SIGLEC7Q9Y286 467 aa8.91□□□□□ -0.98
PRPF40B-204ENST00000527253 A0A1W2PPL8 197 aa8.9□□□□□ -0.98
PRPF40B-204ENST00000527253 C5orf49A4QMS7 147 aa8.9□□□□□ -0.98
PRPF40B-204ENST00000527253 GMNCA6NCL1 334 aa8.9□□□□□ -0.98
PRPF40B-204ENST00000527253 FAM157AC9JC47 383 aa8.9□□□□□ -0.98
PRPF40B-204ENST00000527253 PHF1O43189 567 aaPredicted RBP8.9□□□□□ -0.98
PRPF40B-204ENST00000527253 IFNA2P01563 188 aa8.9□□□□□ -0.98
PRPF40B-204ENST00000527253 CD14P08571 375 aa8.9□□□□□ -0.98
PRPF40B-204ENST00000527253 CTLA4P16410 223 aa8.9□□□□□ -0.98
PRPF40B-204ENST00000527253 RHCEP18577 417 aa8.9□□□□□ -0.98
PRPF40B-204ENST00000527253 MSR1P21757 451 aa8.9□□□□□ -0.98
PRPF40B-204ENST00000527253 RPL4P36578 427 aaKnown RBP8.9□□□□□ -0.98
PRPF40B-204ENST00000527253 GPR6P46095 362 aaPredicted RBP8.9□□□□□ -0.98
PRPF40B-204ENST00000527253 CDH15P55291 814 aa8.9□□□□□ -0.98
PRPF40B-204ENST00000527253 KLF3P57682 345 aaPredicted RBP8.9□□□□□ -0.98
PRPF40B-204ENST00000527253 DBPQ10586 325 aaPredicted RBP8.9□□□□□ -0.98
PRPF40B-204ENST00000527253 HNRNPA0Q13151 305 aaKnown RBP8.9□□□□□ -0.98
PRPF40B-204ENST00000527253 CCNIQ14094 377 aa8.9□□□□□ -0.98
PRPF40B-204ENST00000527253 NKPD1Q17RQ9 610 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms