RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 C11orf40Q8WZ69 217 aa9.38□□□□□ -0.91
NEDD8-205ENST00000527046 ZC3HAV1LQ96H79 300 aaKnown RBP9.38□□□□□ -0.91
NEDD8-205ENST00000527046 HS3ST6Q96QI5 342 aa9.38□□□□□ -0.91
NEDD8-205ENST00000527046 ZNF416Q9BWM5 594 aa9.38□□□□□ -0.91
NEDD8-205ENST00000527046 NDEL1Q9GZM8 345 aa9.38□□□□□ -0.91
NEDD8-205ENST00000527046 MARCH7Q9H992 704 aa9.38□□□□□ -0.91
NEDD8-205ENST00000527046 EMC7Q9NPA0 242 aa9.38□□□□□ -0.91
NEDD8-205ENST00000527046 LOC100130705A0A1B0GUX0 176 aa9.37□□□□□ -0.91
NEDD8-205ENST00000527046 TLX2O43763 284 aaPredicted RBP9.37□□□□□ -0.91
NEDD8-205ENST00000527046 CLIC3O95833 236 aa9.37□□□□□ -0.91
NEDD8-205ENST00000527046 PLAUP00749 431 aa9.37□□□□□ -0.91
NEDD8-205ENST00000527046 RENP00797 406 aa9.37□□□□□ -0.91
NEDD8-205ENST00000527046 CBR1P16152 277 aa9.37□□□□□ -0.91
NEDD8-205ENST00000527046 ZNF14P17017 642 aaPredicted RBP9.37□□□□□ -0.91
NEDD8-205ENST00000527046 CRABP1P29762 137 aa9.37□□□□□ -0.91
NEDD8-205ENST00000527046 RAD23AP54725 363 aa9.37□□□□□ -0.91
NEDD8-205ENST00000527046 PSG4Q00888 419 aa9.37□□□□□ -0.91
NEDD8-205ENST00000527046 HSF2Q03933 536 aa9.37□□□□□ -0.91
NEDD8-205ENST00000527046 PIGFQ07326 219 aa9.37□□□□□ -0.91
NEDD8-205ENST00000527046 PPA1Q15181 289 aa9.37□□□□□ -0.91
NEDD8-205ENST00000527046 SNAPC1Q16533 368 aa9.37□□□□□ -0.91
NEDD8-205ENST00000527046 SGCAQ16586 387 aa9.37□□□□□ -0.91
NEDD8-205ENST00000527046 PCK2Q16822 640 aa9.37□□□□□ -0.91
NEDD8-205ENST00000527046 NCMAPQ5T1S8 102 aa9.37□□□□□ -0.91
NEDD8-205ENST00000527046 MDP1Q86V88 176 aa9.37□□□□□ -0.91
NEDD8-205ENST00000527046 JAZF1Q86VZ6 243 aa9.37□□□□□ -0.91
NEDD8-205ENST00000527046 WFDC8Q8IUA0 241 aa9.37□□□□□ -0.91
NEDD8-205ENST00000527046 GLB1L2Q8IW92 636 aa9.37□□□□□ -0.91
NEDD8-205ENST00000527046 LRRC18Q8N456 261 aa9.37□□□□□ -0.91
NEDD8-205ENST00000527046 TMEM163Q8TC26 289 aa9.37□□□□□ -0.91
NEDD8-205ENST00000527046 LRRC46Q96FV0 321 aa9.37□□□□□ -0.91
NEDD8-205ENST00000527046 IL4I1Q96RQ9 567 aa9.37□□□□□ -0.91
NEDD8-205ENST00000527046 TEAD3Q99594 435 aa9.37□□□□□ -0.91
NEDD8-205ENST00000527046 USB1Q9BQ65 265 aaKnown RBP9.37□□□□□ -0.91
NEDD8-205ENST00000527046 TMEM204Q9BSN7 226 aa9.37□□□□□ -0.91
NEDD8-205ENST00000527046 RERGLQ9H628 205 aa9.37□□□□□ -0.91
NEDD8-205ENST00000527046 WDR76Q9H967 626 aa9.37□□□□□ -0.91
NEDD8-205ENST00000527046 OBP2BQ9NPH6 170 aa9.37□□□□□ -0.91
NEDD8-205ENST00000527046 SMPD3Q9NY59 655 aaPredicted RBP9.37□□□□□ -0.91
NEDD8-205ENST00000527046 KCNN3Q9UGI6 736 aa9.37□□□□□ -0.91
NEDD8-205ENST00000527046 NDRG3Q9UGV2 375 aa9.37□□□□□ -0.91
NEDD8-205ENST00000527046 AMDHD2Q9Y303 409 aa9.37□□□□□ -0.91
NEDD8-205ENST00000527046 LHFPL6Q9Y693 200 aa9.37□□□□□ -0.91
NEDD8-205ENST00000527046 PTPN13Q12923 2485 aa9.36□□□□□ -0.91
NEDD8-205ENST00000527046 IGHV1-18A0A0C4DH31 117 aa9.36□□□□□ -0.91
NEDD8-205ENST00000527046 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.36□□□□□ -0.91
NEDD8-205ENST00000527046 A0A1W2PPL8 197 aa9.36□□□□□ -0.91
NEDD8-205ENST00000527046 TVP23AA6NH52 213 aa9.36□□□□□ -0.91
NEDD8-205ENST00000527046 H0YHG0 523 aa9.36□□□□□ -0.91
NEDD8-205ENST00000527046 CTAG2O75638 210 aa9.36□□□□□ -0.91
NEDD8-205ENST00000527046 HRGP04196 525 aa9.36□□□□□ -0.91
NEDD8-205ENST00000527046 CST2P09228 141 aa9.36□□□□□ -0.91
NEDD8-205ENST00000527046 ZNF32P17041 273 aa9.36□□□□□ -0.91
NEDD8-205ENST00000527046 NPR2P20594 1047 aa9.36□□□□□ -0.91
NEDD8-205ENST00000527046 MSR1P21757 451 aa9.36□□□□□ -0.91
NEDD8-205ENST00000527046 PEX19P40855 299 aa9.36□□□□□ -0.91
NEDD8-205ENST00000527046 RPS27P42677 84 aaKnown RBP9.36□□□□□ -0.91
NEDD8-205ENST00000527046 PTDSS1P48651 473 aaKnown RBP9.36□□□□□ -0.91
NEDD8-205ENST00000527046 ZNF84P51523 738 aa9.36□□□□□ -0.91
NEDD8-205ENST00000527046 KRTAP10-9P60411 292 aa9.36□□□□□ -0.91
NEDD8-205ENST00000527046 LSM6P62312 80 aaKnown RBP9.36□□□□□ -0.91
NEDD8-205ENST00000527046 RAB1AP62820 205 aa9.36□□□□□ -0.91
NEDD8-205ENST00000527046 TEKQ02763 1124 aa9.36□□□□□ -0.91
NEDD8-205ENST00000527046 CCDC92Q53HC0 331 aaPredicted RBP9.36□□□□□ -0.91
NEDD8-205ENST00000527046 SLC25A30Q5SVS4 291 aa9.36□□□□□ -0.91
NEDD8-205ENST00000527046 C1QTNF12Q5T7M4 302 aa9.36□□□□□ -0.91
NEDD8-205ENST00000527046 USP51Q70EK9 711 aa9.36□□□□□ -0.91
NEDD8-205ENST00000527046 CXXC5Q7LFL8 322 aaKnown RBP9.36□□□□□ -0.91
NEDD8-205ENST00000527046 TIGD4Q8IY51 512 aa9.36□□□□□ -0.91
NEDD8-205ENST00000527046 CCDC36Q8IYA8 594 aa9.36□□□□□ -0.91
NEDD8-205ENST00000527046 ENTHD1Q8IYW4 607 aa9.36□□□□□ -0.91
NEDD8-205ENST00000527046 OR10S1Q8NGN2 331 aa9.36□□□□□ -0.91
NEDD8-205ENST00000527046 OR2T4Q8NH00 348 aa9.36□□□□□ -0.91
NEDD8-205ENST00000527046 RHOXF1Q8NHV9 184 aa9.36□□□□□ -0.91
NEDD8-205ENST00000527046 APH1BQ8WW43 257 aa9.36□□□□□ -0.91
NEDD8-205ENST00000527046 TFAP2CQ92754 450 aa9.36□□□□□ -0.91
NEDD8-205ENST00000527046 MS4A3Q96HJ5 214 aa9.36□□□□□ -0.91
NEDD8-205ENST00000527046 MAP6Q96JE9 813 aa9.36□□□□□ -0.91
NEDD8-205ENST00000527046 RDH12Q96NR8 316 aa9.36□□□□□ -0.91
NEDD8-205ENST00000527046 MED18Q9BUE0 208 aa9.36□□□□□ -0.91
NEDD8-205ENST00000527046 WNT5BQ9H1J7 359 aa9.36□□□□□ -0.91
NEDD8-205ENST00000527046 PNRC2Q9NPJ4 139 aaKnown RBP9.36□□□□□ -0.91
NEDD8-205ENST00000527046 C8orf4Q9NR00 106 aa9.36□□□□□ -0.91
NEDD8-205ENST00000527046 CYB5R1Q9UHQ9 305 aa9.36□□□□□ -0.91
NEDD8-205ENST00000527046 RAI1Q7Z5J4 1906 aaPredicted RBP9.36□□□□□ -0.91
NEDD8-205ENST00000527046 LOC100509620A0A075B734 347 aa9.35□□□□□ -0.91
NEDD8-205ENST00000527046 A6NNC1 897 aa9.35□□□□□ -0.91
NEDD8-205ENST00000527046 RIIAD1A6NNX1 92 aa9.35□□□□□ -0.91
NEDD8-205ENST00000527046 PRR23D1E9PI22 279 aaPredicted RBP9.35□□□□□ -0.91
NEDD8-205ENST00000527046 H0YJX3 145 aa9.35□□□□□ -0.91
NEDD8-205ENST00000527046 WBP4O75554 376 aaKnown RBP9.35□□□□□ -0.91
NEDD8-205ENST00000527046 GLCEO94923 617 aa9.35□□□□□ -0.91
NEDD8-205ENST00000527046 WNT11O96014 354 aa9.35□□□□□ -0.91
NEDD8-205ENST00000527046 IFNGP01579 166 aa9.35□□□□□ -0.91
NEDD8-205ENST00000527046 GNAO1P09471 354 aa9.35□□□□□ -0.91
NEDD8-205ENST00000527046 PRR23D2P0DMB1 279 aaPredicted RBP9.35□□□□□ -0.91
NEDD8-205ENST00000527046 NR2C1P13056 603 aa9.35□□□□□ -0.91
NEDD8-205ENST00000527046 ZNF35P13682 527 aa9.35□□□□□ -0.91
NEDD8-205ENST00000527046 ZNF3P17036 446 aa9.35□□□□□ -0.91
NEDD8-205ENST00000527046 ANOS1P23352 680 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms