RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 LRRC8CQ8TDW0 803 aa20.28■□□□□ 0.84
USP47-205ENST00000525257 SLC26A7Q8TE54 656 aa20.28■□□□□ 0.84
USP47-205ENST00000525257 GEMIN6Q8WXD5 167 aaKnown RBP20.28■□□□□ 0.84
USP47-205ENST00000525257 NSMAFQ92636 917 aa20.28■□□□□ 0.84
USP47-205ENST00000525257 NABP1Q96AH0 204 aa20.28■□□□□ 0.84
USP47-205ENST00000525257 CGREF1Q99674 301 aa20.28■□□□□ 0.84
USP47-205ENST00000525257 ZNF747Q9BV97 191 aa20.28■□□□□ 0.84
USP47-205ENST00000525257 EGLN1Q9GZT9 426 aa20.28■□□□□ 0.84
USP47-205ENST00000525257 IGKV1D-43A0A0B4J1Z2 117 aa20.27■□□□□ 0.84
USP47-205ENST00000525257 MT-ND1P03886 318 aa20.27■□□□□ 0.84
USP47-205ENST00000525257 HKR1P10072 659 aa20.27■□□□□ 0.84
USP47-205ENST00000525257 FUT1P19526 365 aa20.27■□□□□ 0.84
USP47-205ENST00000525257 ZFP36P26651 326 aaKnown RBP20.27■□□□□ 0.84
USP47-205ENST00000525257 ERVK-25P63136 954 aa20.27■□□□□ 0.84
USP47-205ENST00000525257 PRR31Q5SQ13 230 aa20.27■□□□□ 0.84
USP47-205ENST00000525257 MBNL2Q5VZF2 373 aaKnown RBP20.27■□□□□ 0.84
USP47-205ENST00000525257 RBMS3Q6XE24 437 aaKnown RBP20.27■□□□□ 0.84
USP47-205ENST00000525257 MOSPD2Q8NHP6 518 aa20.27■□□□□ 0.84
USP47-205ENST00000525257 ABHD4Q8TB40 342 aa20.27■□□□□ 0.84
USP47-205ENST00000525257 DUX5Q96PT3 197 aa20.27■□□□□ 0.84
USP47-205ENST00000525257 C1QTNF5Q9BXJ0 243 aa20.27■□□□□ 0.84
USP47-205ENST00000525257 NANOGQ9H9S0 305 aa20.27■□□□□ 0.84
USP47-205ENST00000525257 DCAF16Q9NXF7 216 aa20.27■□□□□ 0.84
USP47-205ENST00000525257 OR7A10O76100 309 aa20.26■□□□□ 0.83
USP47-205ENST00000525257 VIMP08670 466 aaKnown RBP20.26■□□□□ 0.83
USP47-205ENST00000525257 PCGF2P35227 344 aa20.26■□□□□ 0.83
USP47-205ENST00000525257 PSG4Q00888 419 aa20.26■□□□□ 0.83
USP47-205ENST00000525257 CD47Q08722 323 aa20.26■□□□□ 0.83
USP47-205ENST00000525257 FOXL1Q12952 345 aa20.26■□□□□ 0.83
USP47-205ENST00000525257 ARMC4Q5T2S8 1044 aa20.26■□□□□ 0.83
USP47-205ENST00000525257 UNQ6126/PRO20091Q6UXV3 157 aa20.26■□□□□ 0.83
USP47-205ENST00000525257 NKAIN4Q8IVV8 208 aa20.26■□□□□ 0.83
USP47-205ENST00000525257 SLC30A8Q8IWU4 369 aa20.26■□□□□ 0.83
USP47-205ENST00000525257 HDAC2Q92769 488 aaKnown RBP20.26■□□□□ 0.83
USP47-205ENST00000525257 CYSLTR2Q9NS75 346 aa20.26■□□□□ 0.83
USP47-205ENST00000525257 C20orf141Q9NUB4 165 aa20.26■□□□□ 0.83
USP47-205ENST00000525257 NDUFAF1Q9Y375 327 aa20.26■□□□□ 0.83
USP47-205ENST00000525257 FOXH1O75593 365 aa20.25■□□□□ 0.83
USP47-205ENST00000525257 RBMXP38159 391 aaKnown RBP20.25■□□□□ 0.83
USP47-205ENST00000525257 PPP1CBP62140 327 aa20.25■□□□□ 0.83
USP47-205ENST00000525257 ARMCX4Q5H9R4 360 aa20.25■□□□□ 0.83
USP47-205ENST00000525257 SHISA2Q6UWI4 295 aa20.25■□□□□ 0.83
USP47-205ENST00000525257 DPP10Q8N608 796 aa20.25■□□□□ 0.83
USP47-205ENST00000525257 DEFB108BQ8NET1 73 aa20.25■□□□□ 0.83
USP47-205ENST00000525257 TMEM255BQ8WV15 326 aa20.25■□□□□ 0.83
USP47-205ENST00000525257 NMD3Q96D46 503 aaKnown RBP20.25■□□□□ 0.83
USP47-205ENST00000525257 SGTBQ96EQ0 304 aa20.25■□□□□ 0.83
USP47-205ENST00000525257 DCLRE1CQ96SD1 692 aaKnown RBP20.25■□□□□ 0.83
USP47-205ENST00000525257 KAT8Q9H7Z6 458 aaKnown RBP20.25■□□□□ 0.83
USP47-205ENST00000525257 SMURF2Q9HAU4 748 aa20.25■□□□□ 0.83
USP47-205ENST00000525257 MSL2Q9HCI7 577 aa20.25■□□□□ 0.83
USP47-205ENST00000525257 MMP26Q9NRE1 261 aa20.25■□□□□ 0.83
USP47-205ENST00000525257 NPTNQ9Y639 398 aa20.25■□□□□ 0.83
USP47-205ENST00000525257 ANGPT2O15123 496 aa20.24■□□□□ 0.83
USP47-205ENST00000525257 ADH4P08319 380 aa20.24■□□□□ 0.83
USP47-205ENST00000525257 CRYBA2P53672 197 aa20.24■□□□□ 0.83
USP47-205ENST00000525257 OR10A6Q8NH74 314 aa20.24■□□□□ 0.83
USP47-205ENST00000525257 POP5Q969H6 163 aaKnown RBP20.24■□□□□ 0.83
USP47-205ENST00000525257 WNT5BQ9H1J7 359 aa20.24■□□□□ 0.83
USP47-205ENST00000525257 RABEP2Q9H5N1 569 aa20.24■□□□□ 0.83
USP47-205ENST00000525257 ZNF696Q9H7X3 374 aa20.24■□□□□ 0.83
USP47-205ENST00000525257 NPHS2Q9NP85 383 aa20.24■□□□□ 0.83
USP47-205ENST00000525257 STX18Q9P2W9 335 aaKnown RBP20.24■□□□□ 0.83
USP47-205ENST00000525257 ZNF69Q9UC07 566 aa20.24■□□□□ 0.83
USP47-205ENST00000525257 PURGQ9UJV8 347 aaKnown RBP20.24■□□□□ 0.83
USP47-205ENST00000525257 ZDHHC8Q9ULC8 765 aa20.24■□□□□ 0.83
USP47-205ENST00000525257 PPIAL4EA0A075B759 164 aa20.23■□□□□ 0.83
USP47-205ENST00000525257 PPIAL4CA0A0B4J2A2 164 aa20.23■□□□□ 0.83
USP47-205ENST00000525257 DNAJC9-AS1A6NH13 148 aa20.23■□□□□ 0.83
USP47-205ENST00000525257 PPIAL4DF5H284 164 aa20.23■□□□□ 0.83
USP47-205ENST00000525257 NGFP01138 241 aa20.23■□□□□ 0.83
USP47-205ENST00000525257 IGHV2-70P01814 119 aa20.23■□□□□ 0.83
USP47-205ENST00000525257 SBK2P0C263 348 aa20.23■□□□□ 0.83
USP47-205ENST00000525257 PPIAL4FP0DN26 164 aa20.23■□□□□ 0.83
USP47-205ENST00000525257 TNFRSF1BP20333 461 aa20.23■□□□□ 0.83
USP47-205ENST00000525257 LIPAP38571 399 aa20.23■□□□□ 0.83
USP47-205ENST00000525257 TAS2R41P59536 307 aa20.23■□□□□ 0.83
USP47-205ENST00000525257 TOP3AQ13472 1001 aaPredicted RBP20.23■□□□□ 0.83
USP47-205ENST00000525257 NFYCQ13952 458 aa20.23■□□□□ 0.83
USP47-205ENST00000525257 INTS11Q5TA45 600 aaKnown RBP20.23■□□□□ 0.83
USP47-205ENST00000525257 SLC25A47Q6Q0C1 308 aa20.23■□□□□ 0.83
USP47-205ENST00000525257 DOK3Q7L591 496 aa20.23■□□□□ 0.83
USP47-205ENST00000525257 LRRC58Q96CX6 371 aa20.23■□□□□ 0.83
USP47-205ENST00000525257 OR2H1Q9GZK4 316 aa20.23■□□□□ 0.83
USP47-205ENST00000525257 CGGBP1Q9UFW8 167 aaPredicted RBP20.23■□□□□ 0.83
USP47-205ENST00000525257 NUP50Q9UKX7 468 aa20.23■□□□□ 0.83
USP47-205ENST00000525257 SH3GLB1Q9Y371 365 aa20.23■□□□□ 0.83
USP47-205ENST00000525257 TGP01266 2768 aa20.22■□□□□ 0.83
USP47-205ENST00000525257 TIMM8AO60220 97 aaPredicted RBP20.22■□□□□ 0.83
USP47-205ENST00000525257 SHOX2O60902 331 aaPredicted RBP20.22■□□□□ 0.83
USP47-205ENST00000525257 CD55P08174 381 aa20.22■□□□□ 0.83
USP47-205ENST00000525257 PRTN3P24158 256 aa20.22■□□□□ 0.83
USP47-205ENST00000525257 LAP3P28838 519 aa20.22■□□□□ 0.83
USP47-205ENST00000525257 RBM34P42696 430 aaKnown RBP20.22■□□□□ 0.83
USP47-205ENST00000525257 TNFAIP6P98066 277 aaPredicted RBP20.22■□□□□ 0.83
USP47-205ENST00000525257 LAPTM4AQ15012 233 aa20.22■□□□□ 0.83
USP47-205ENST00000525257 TAF11Q15544 211 aa20.22■□□□□ 0.83
USP47-205ENST00000525257 ZMAT1Q5H9K5 638 aa20.22■□□□□ 0.83
USP47-205ENST00000525257 FAM27BQ5VT28 67 aa20.22■□□□□ 0.83
USP47-205ENST00000525257 ALDH16A1Q8IZ83 802 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms