RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 EMC3Q9P0I2 261 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 GRHPRQ9UBQ7 328 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 KLHDC2Q9Y2U9 406 aa5.67□□□□□ -1.5
CD44-214ENST00000525211 UTP20O75691 2785 aaKnown RBP5.67□□□□□ -1.5
CD44-214ENST00000525211 CADP27708 2225 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 LOC100130705A0A1B0GUX0 176 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 A6NIZ1 184 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 TLX2O43763 284 aaPredicted RBP5.66□□□□□ -1.5
CD44-214ENST00000525211 IDH3BO43837 385 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 SELENOFO60613 162 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 ENTPD6O75354 484 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 WBP4O75554 376 aaKnown RBP5.66□□□□□ -1.5
CD44-214ENST00000525211 PLAUP00749 431 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 IGHG1P01857 330 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 HLA-HP01893 362 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 B4GALT1P15291 398 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 SPI1P17947 270 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 PSMB1P20618 241 aaKnown RBP5.66□□□□□ -1.5
CD44-214ENST00000525211 MPGP29372 298 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 PCYT1AP49585 367 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 ASCL1P50553 236 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 ARHGDIAP52565 204 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 SMSP52788 366 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 NUDT6P53370 316 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 RAP1BP61224 184 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 RAP1AP62834 184 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 SPOCK1Q08629 439 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 TAB1Q15750 504 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 SNAPC1Q16533 368 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 SGCAQ16586 387 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 RSPO1Q2MKA7 263 aaPredicted RBP5.66□□□□□ -1.5
CD44-214ENST00000525211 SLC25A35Q3KQZ1 300 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 TBRG1Q3YBR2 411 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 C10orf128Q5T292 105 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 GPR139Q6DWJ6 353 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 CORO6Q6QEF8 472 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 IZUMO2Q6UXV1 221 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 SHFQ7M4L6 423 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 BHLHA15Q7RTS1 189 aaPredicted RBP5.66□□□□□ -1.5
CD44-214ENST00000525211 ZBTB46Q86UZ6 589 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 ENTHD1Q8IYW4 607 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 GPR137CQ8N3F9 429 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 LRRC18Q8N456 261 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 POMGNT2Q8NAT1 580 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 OR52L1Q8NGH7 329 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 OR10S1Q8NGN2 331 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 OR52N5Q8NH56 324 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 CNIH3Q8TBE1 160 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 FAM81AQ8TBF8 368 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 CYGBQ8WWM9 190 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 C11orf40Q8WZ69 217 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 RNASE6Q93091 150 aaKnown RBP5.66□□□□□ -1.5
CD44-214ENST00000525211 OTULINQ96BN8 352 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 ZMYND19Q96E35 227 aaPredicted RBP5.66□□□□□ -1.5
CD44-214ENST00000525211 ZC3HAV1LQ96H79 300 aaKnown RBP5.66□□□□□ -1.5
CD44-214ENST00000525211 HRASLS5Q96KN8 279 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 ADAD1Q96M93 576 aaKnown RBP5.66□□□□□ -1.5
CD44-214ENST00000525211 ZNF582Q96NG8 517 aaPredicted RBP5.66□□□□□ -1.5
CD44-214ENST00000525211 MUS81Q96NY9 551 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 FOXB1Q99853 325 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 TACO1Q9BSH4 297 aaKnown RBP5.66□□□□□ -1.5
CD44-214ENST00000525211 ALG12Q9BV10 488 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 ACTR6Q9GZN1 396 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 OR51V1Q9H2C8 321 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 WDR76Q9H967 626 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 KCNJ16Q9NPI9 418 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 POLE4Q9NR33 117 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 SLC17A5Q9NRA2 495 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 RASSF1Q9NS23 344 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 TMEM38BQ9NVV0 291 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 PARPBPQ9NWS1 579 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 SMPD3Q9NY59 655 aaPredicted RBP5.66□□□□□ -1.5
CD44-214ENST00000525211 COQ3Q9NZJ6 369 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 UPB1Q9UBR1 384 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 SLC25A15Q9Y619 301 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 USP9YO00507 2555 aaPredicted RBP5.66□□□□□ -1.5
CD44-214ENST00000525211 HECTD1Q9ULT8 2610 aa5.66□□□□□ -1.5
CD44-214ENST00000525211 A0A1W2PPL8 197 aa5.65□□□□□ -1.5
CD44-214ENST00000525211 ZNF99A8MXY4 864 aaPredicted RBP5.65□□□□□ -1.5
CD44-214ENST00000525211 PRSS44E7EML9 344 aa5.65□□□□□ -1.5
CD44-214ENST00000525211 ZNF587BE7ETH6 402 aa5.65□□□□□ -1.5
CD44-214ENST00000525211 C16orf97H3BN30 126 aa5.65□□□□□ -1.5
CD44-214ENST00000525211 SLC16A6O15403 523 aa5.65□□□□□ -1.5
CD44-214ENST00000525211 MAGEB4O15481 346 aaPredicted RBP5.65□□□□□ -1.5
CD44-214ENST00000525211 KRT33AO76009 404 aa5.65□□□□□ -1.5
CD44-214ENST00000525211 MMP7P09237 267 aaPredicted RBP5.65□□□□□ -1.5
CD44-214ENST00000525211 AGAP20933 346 aa5.65□□□□□ -1.5
CD44-214ENST00000525211 LAP3P28838 519 aa5.65□□□□□ -1.5
CD44-214ENST00000525211 FMO3P31513 532 aa5.65□□□□□ -1.5
CD44-214ENST00000525211 CAPGP40121 348 aa5.65□□□□□ -1.5
CD44-214ENST00000525211 SLC25A1P53007 311 aa5.65□□□□□ -1.5
CD44-214ENST00000525211 MVKQ03426 396 aa5.65□□□□□ -1.5
CD44-214ENST00000525211 HGFACQ04756 655 aa5.65□□□□□ -1.5
CD44-214ENST00000525211 PIGFQ07326 219 aa5.65□□□□□ -1.5
CD44-214ENST00000525211 APOFQ13790 326 aa5.65□□□□□ -1.5
CD44-214ENST00000525211 MAD2L1BPQ15013 274 aaPredicted RBP5.65□□□□□ -1.5
CD44-214ENST00000525211 TAF11Q15544 211 aa5.65□□□□□ -1.5
CD44-214ENST00000525211 STK11Q15831 433 aa5.65□□□□□ -1.5
CD44-214ENST00000525211 MSMPQ1L6U9 139 aa5.65□□□□□ -1.5
CD44-214ENST00000525211 CCDC92Q53HC0 331 aaPredicted RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms