RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 OSMP13725 252 aa4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 HIST1H1CP16403 213 aaKnown RBP4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 CTLA4P16410 223 aa4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 ZNF823P16415 610 aa4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 ZNF14P17017 642 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 ZNF26P17031 533 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 ZNF32P17041 273 aa4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 CCNOP22674 350 aa4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 STOMP27105 288 aa4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 APOBEC3AP31941 199 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 TTKP33981 857 aa4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 GRK5P34947 590 aa4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 SERPINF1P36955 418 aa4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 RAD52P43351 418 aa4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 HTR5AP47898 357 aa4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 BLVRAP53004 296 aa4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 ATP5J2P56134 94 aa4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 FXYD6P3P58550 94 aa4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 ACTR3P61158 418 aa4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 LSM6P62312 80 aaKnown RBP4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 NKX6-1P78426 367 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 CCNIQ14094 377 aa4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 KPNB1Q14974 876 aaKnown RBP4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 ETFDHQ16134 617 aa4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 PGGHGQ32M88 737 aa4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 PABPC1L2AQ5JQF8 200 aa4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 SHEQ5VZ18 495 aa4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 KRT80Q6KB66 452 aa4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 CD300LDQ6UXZ3 194 aa4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 YTHDF3Q7Z739 585 aaKnown RBP4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 SYT9Q86SS6 491 aa4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 WDFY1Q8IWB7 410 aa4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 LRRC75A-AS1Q8N1F1 130 aa4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 LNX2Q8N448 690 aa4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 SDR9C7Q8NEX9 313 aa4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 NUP37Q8NFH4 326 aa4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 OR2AJ1Q8NGZ0 328 aa4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 HTRA1Q92743 480 aa4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 NEUROG1Q92886 237 aa4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 OTULINQ96BN8 352 aa4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 NMD3Q96D46 503 aaKnown RBP4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 PERPQ96FX8 193 aa4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 DUS3LQ96G46 650 aaKnown RBP4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 CENPNQ96H22 339 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 MS4A3Q96HJ5 214 aa4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 NMNAT3Q96T66 252 aa4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 NIPSNAP1Q9BPW8 284 aa4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 OSBPL10Q9BXB5 764 aa4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 GSX2Q9BZM3 304 aa4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 BCL2L14Q9BZR8 327 aa4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 NUAK2Q9H093 628 aa4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 RACGAP1Q9H0H5 632 aa4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 ZNF442Q9H7R0 627 aa4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 NOX3Q9HBY0 568 aa4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 SRA1Q9HD15 236 aaKnown RBP4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 DYNLRB1Q9NP97 96 aa4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 PAPOLBQ9NRJ5 636 aaKnown RBP4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 CA10Q9NS85 328 aa4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 KRT84Q9NSB2 600 aa4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 B3GNT2Q9NY97 397 aa4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 GPR160Q9UJ42 338 aa4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 KCNG2Q9UJ96 466 aa4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 NDRG4Q9ULP0 352 aaKnown RBP4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 COA3Q9Y2R0 106 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 CMAHPQ9Y471 501 aa4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 FKBP7Q9Y680 259 aa4.69□□□□□ -1.66
HMGB1P40-201ENST00000525121 IGLV1-36A0A0B4J1U3 117 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 IGKV1D-43A0A0B4J1Z2 117 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 A0A1W2PPW3 197 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 C5orf49A4QMS7 147 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 ZNF503-AS2A6NEH8 195 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 B9A039 149 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 E7EQL1 145 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 PRR23D1E9PI22 279 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 SNAP29O95721 258 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 ABHD16AO95870 558 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 LCKP06239 509 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 SOD3P08294 240 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 PRR23D2P0DMB1 279 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 COX5BP10606 129 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 NR4A1P22736 598 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 IGFBP5P24593 272 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 APEX1P27695 318 aaKnown RBP4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 CALCRP30988 508 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 FMO3P31513 532 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 CDKN2AP42771 156 aaKnown RBP4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 PTH2RP49190 550 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 NUDT6P53370 316 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 ESRRGP62508 458 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 ADAM8P78325 824 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 GABPB1Q06547 395 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 CRMP1Q14194 572 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 RAB35Q15286 201 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 EFNB3Q15768 340 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 MOGQ16653 247 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 Q5PR19 223 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 RGS7BPQ6MZT1 257 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 B3GLCTQ6Y288 498 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms