RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 SCELO95171 688 aa5.6□□□□□ -1.51
NEDD8-203ENST00000524927 TBX6O95947 436 aaPredicted RBP5.6□□□□□ -1.51
NEDD8-203ENST00000524927 IGHV3-9P01782 118 aa5.6□□□□□ -1.51
NEDD8-203ENST00000524927 OPN1LWP04000 364 aa5.6□□□□□ -1.51
NEDD8-203ENST00000524927 FAM106CPP0CH98 169 aa5.6□□□□□ -1.51
NEDD8-203ENST00000524927 ATP5A1P25705 553 aaKnown RBP5.6□□□□□ -1.51
NEDD8-203ENST00000524927 KIR2DS4P43632 304 aa5.6□□□□□ -1.51
NEDD8-203ENST00000524927 PPICP45877 212 aa5.6□□□□□ -1.51
NEDD8-203ENST00000524927 HTR6P50406 440 aa5.6□□□□□ -1.51
NEDD8-203ENST00000524927 PSPHP78330 225 aa5.6□□□□□ -1.51
NEDD8-203ENST00000524927 MRPS22P82650 360 aaKnown RBP5.6□□□□□ -1.51
NEDD8-203ENST00000524927 TGFBR3Q03167 851 aa5.6□□□□□ -1.51
NEDD8-203ENST00000524927 RELQ04864 619 aaPredicted RBP5.6□□□□□ -1.51
NEDD8-203ENST00000524927 LCP2Q13094 533 aa5.6□□□□□ -1.51
NEDD8-203ENST00000524927 TECRLQ5HYJ1 363 aa5.6□□□□□ -1.51
NEDD8-203ENST00000524927 RNASEH2BQ5TBB1 312 aaKnown RBP5.6□□□□□ -1.51
NEDD8-203ENST00000524927 CENPUQ71F23 418 aa5.6□□□□□ -1.51
NEDD8-203ENST00000524927 TMEM219Q86XT9 240 aa5.6□□□□□ -1.51
NEDD8-203ENST00000524927 SBSPONQ8IVN8 264 aa5.6□□□□□ -1.51
NEDD8-203ENST00000524927 OR8K1Q8NGG5 319 aa5.6□□□□□ -1.51
NEDD8-203ENST00000524927 OR2AJ1Q8NGZ0 328 aa5.6□□□□□ -1.51
NEDD8-203ENST00000524927 ZNF75CPQ92670 426 aaPredicted RBP5.6□□□□□ -1.51
NEDD8-203ENST00000524927 PEX13Q92968 403 aa5.6□□□□□ -1.51
NEDD8-203ENST00000524927 APH1AQ96BI3 265 aa5.6□□□□□ -1.51
NEDD8-203ENST00000524927 MTERF3Q96E29 417 aa5.6□□□□□ -1.51
NEDD8-203ENST00000524927 PPANQ9NQ55 473 aaKnown RBP5.6□□□□□ -1.51
NEDD8-203ENST00000524927 LYARQ9NX58 379 aaKnown RBP5.6□□□□□ -1.51
NEDD8-203ENST00000524927 RHCGQ9UBD6 479 aa5.6□□□□□ -1.51
NEDD8-203ENST00000524927 OR5V1Q9UGF6 321 aa5.6□□□□□ -1.51
NEDD8-203ENST00000524927 SLC2A6Q9UGQ3 507 aa5.6□□□□□ -1.51
NEDD8-203ENST00000524927 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.6□□□□□ -1.513e-9■■□□□ 11.5
NEDD8-203ENST00000524927 SRRM2Q9UQ35 2752 aaKnown RBP5.6□□□□□ -1.51
NEDD8-203ENST00000524927 IGLV3-32A0A0A0MS00 114 aa5.59□□□□□ -1.51
NEDD8-203ENST00000524927 PRSS51A0A1B0GVH4 220 aa5.59□□□□□ -1.51
NEDD8-203ENST00000524927 A0A1B0GW55 424 aa5.59□□□□□ -1.51
NEDD8-203ENST00000524927 E5RI56 91 aa5.59□□□□□ -1.51
NEDD8-203ENST00000524927 ZNF587BE7ETH6 402 aa5.59□□□□□ -1.51
NEDD8-203ENST00000524927 SCO2O43819 266 aa5.59□□□□□ -1.51
NEDD8-203ENST00000524927 CT62P0C5K7 136 aa5.59□□□□□ -1.51
NEDD8-203ENST00000524927 DUX4L2P0CJ85 424 aa5.59□□□□□ -1.51
NEDD8-203ENST00000524927 DUX4L3P0CJ86 424 aa5.59□□□□□ -1.51
NEDD8-203ENST00000524927 DUX4L5P0CJ88 424 aa5.59□□□□□ -1.51
NEDD8-203ENST00000524927 DUX4L6P0CJ89 424 aa5.59□□□□□ -1.51
NEDD8-203ENST00000524927 DUX4L7P0CJ90 424 aa5.59□□□□□ -1.51
NEDD8-203ENST00000524927 CALCRP30988 508 aa5.59□□□□□ -1.51
NEDD8-203ENST00000524927 EVI2BP34910 448 aa5.59□□□□□ -1.51
NEDD8-203ENST00000524927 KLK7P49862 253 aa5.59□□□□□ -1.51
NEDD8-203ENST00000524927 TRIP13Q15645 432 aaPredicted RBP5.59□□□□□ -1.51
NEDD8-203ENST00000524927 CPTPQ5TA50 214 aa5.59□□□□□ -1.51
NEDD8-203ENST00000524927 DUX4L9Q6RFH8 374 aaPredicted RBP5.59□□□□□ -1.51
NEDD8-203ENST00000524927 BTNL3Q6UXE8 466 aa5.59□□□□□ -1.51
NEDD8-203ENST00000524927 UNQ9370/PRO34162Q6UXP9 181 aa5.59□□□□□ -1.51
NEDD8-203ENST00000524927 TMIGD1Q6UXZ0 262 aa5.59□□□□□ -1.51
NEDD8-203ENST00000524927 MBOAT1Q6ZNC8 495 aa5.59□□□□□ -1.51
NEDD8-203ENST00000524927 RPP25LQ8N5L8 163 aaKnown RBP5.59□□□□□ -1.51
NEDD8-203ENST00000524927 BBS10Q8TAM1 723 aa5.59□□□□□ -1.51
NEDD8-203ENST00000524927 P3H4Q92791 437 aa5.59□□□□□ -1.51
NEDD8-203ENST00000524927 ZBTB9Q96C00 473 aa5.59□□□□□ -1.51
NEDD8-203ENST00000524927 C16orf58Q96GQ5 468 aa5.59□□□□□ -1.51
NEDD8-203ENST00000524927 SEPHS2Q99611 448 aa5.59□□□□□ -1.51
NEDD8-203ENST00000524927 CITED2Q99967 270 aaPredicted RBP5.59□□□□□ -1.51
NEDD8-203ENST00000524927 WNT5BQ9H1J7 359 aa5.59□□□□□ -1.51
NEDD8-203ENST00000524927 SLA2Q9H6Q3 261 aa5.59□□□□□ -1.51
NEDD8-203ENST00000524927 LRRC40Q9H9A6 602 aa5.59□□□□□ -1.51
NEDD8-203ENST00000524927 PARVBQ9HBI1 364 aa5.59□□□□□ -1.51
NEDD8-203ENST00000524927 UBAP1Q9NZ09 502 aa5.59□□□□□ -1.51
NEDD8-203ENST00000524927 DUX4Q9UBX2 424 aa5.59□□□□□ -1.51
NEDD8-203ENST00000524927 VPREB3Q9UKI3 123 aa5.59□□□□□ -1.51
NEDD8-203ENST00000524927 SIGLEC9Q9Y336 463 aa5.59□□□□□ -1.51
NEDD8-203ENST00000524927 MAD1L1Q9Y6D9 718 aa5.59□□□□□ -1.51
NEDD8-203ENST00000524927 HSPG2P98160 4391 aa5.59□□□□□ -1.52
NEDD8-203ENST00000524927 IGHV1-69-2A0A0G2JMI3 117 aa5.58□□□□□ -1.52
NEDD8-203ENST00000524927 ZCWPW2A0A1B0GU75 182 aa5.58□□□□□ -1.52
NEDD8-203ENST00000524927 MAGEA13PA6NCF6 341 aa5.58□□□□□ -1.52
NEDD8-203ENST00000524927 OR6C65A6NJZ3 312 aa5.58□□□□□ -1.52
NEDD8-203ENST00000524927 GJE1A6NN92 205 aa5.58□□□□□ -1.52
NEDD8-203ENST00000524927 FADS1O60427 444 aa5.58□□□□□ -1.52
NEDD8-203ENST00000524927 CYTIPO60759 359 aa5.58□□□□□ -1.52
NEDD8-203ENST00000524927 PROSCO94903 275 aa5.58□□□□□ -1.52
NEDD8-203ENST00000524927 C8GP07360 202 aa5.58□□□□□ -1.52
NEDD8-203ENST00000524927 HIST1H2AGP0C0S8 130 aaPredicted RBP5.58□□□□□ -1.52
NEDD8-203ENST00000524927 CECR9P0C854 216 aa5.58□□□□□ -1.52
NEDD8-203ENST00000524927 OR12D1P0DN82 309 aa5.58□□□□□ -1.52
NEDD8-203ENST00000524927 CD28P10747 220 aa5.58□□□□□ -1.52
NEDD8-203ENST00000524927 IL12BP29460 328 aa5.58□□□□□ -1.52
NEDD8-203ENST00000524927 ALDH3B1P43353 468 aa5.58□□□□□ -1.52
NEDD8-203ENST00000524927 FOXG1P55316 489 aaPredicted RBP5.58□□□□□ -1.52
NEDD8-203ENST00000524927 IFT88Q13099 833 aa5.58□□□□□ -1.52
NEDD8-203ENST00000524927 CUL1Q13616 776 aa5.58□□□□□ -1.52
NEDD8-203ENST00000524927 TFDP2Q14188 446 aa5.58□□□□□ -1.52
NEDD8-203ENST00000524927 ZBTB49Q6ZSB9 765 aa5.58□□□□□ -1.52
NEDD8-203ENST00000524927 TMPRSS11BQ86T26 416 aa5.58□□□□□ -1.52
NEDD8-203ENST00000524927 SLAMF9Q96A28 289 aa5.58□□□□□ -1.52
NEDD8-203ENST00000524927 MED30Q96HR3 178 aa5.58□□□□□ -1.52
NEDD8-203ENST00000524927 TSNARE1Q96NA8 513 aa5.58□□□□□ -1.52
NEDD8-203ENST00000524927 ZNF300Q96RE9 604 aaPredicted RBP5.58□□□□□ -1.52
NEDD8-203ENST00000524927 ABHD6Q9BV23 337 aa5.58□□□□□ -1.52
NEDD8-203ENST00000524927 MRPL37Q9BZE1 423 aaKnown RBP5.58□□□□□ -1.52
NEDD8-203ENST00000524927 CSTL1Q9H114 145 aa5.58□□□□□ -1.52
NEDD8-203ENST00000524927 TMEM185BQ9H7F4 350 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms