RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 NEUROG1Q92886 237 aa13.11□□□□□ -0.31
SF3B2-202ENST00000524475 DDOQ99489 341 aa13.11□□□□□ -0.31
SF3B2-202ENST00000524475 CCL19Q99731 98 aa13.11□□□□□ -0.31
SF3B2-202ENST00000524475 TSSK6Q9BXA6 273 aa13.11□□□□□ -0.31
SF3B2-202ENST00000524475 GABARAPL1Q9H0R8 117 aa13.11□□□□□ -0.31
SF3B2-202ENST00000524475 POU2F3Q9UKI9 436 aa13.11□□□□□ -0.31
SF3B2-202ENST00000524475 FKBP7Q9Y680 259 aa13.11□□□□□ -0.31
SF3B2-202ENST00000524475 IGLV1-36A0A0B4J1U3 117 aa13.1□□□□□ -0.31
SF3B2-202ENST00000524475 ATP6V1G2-DDX39BF2Z307 99 aa13.1□□□□□ -0.31
SF3B2-202ENST00000524475 SLC16A7O60669 478 aa13.1□□□□□ -0.31
SF3B2-202ENST00000524475 SNAP29O95721 258 aa13.1□□□□□ -0.31
SF3B2-202ENST00000524475 ZNF35P13682 527 aa13.1□□□□□ -0.31
SF3B2-202ENST00000524475 OSMP13725 252 aa13.1□□□□□ -0.31
SF3B2-202ENST00000524475 LAP3P28838 519 aa13.1□□□□□ -0.31
SF3B2-202ENST00000524475 CALCRP30988 508 aa13.1□□□□□ -0.31
SF3B2-202ENST00000524475 LSM6P62312 80 aaKnown RBP13.1□□□□□ -0.31
SF3B2-202ENST00000524475 PIGFQ07326 219 aa13.1□□□□□ -0.31
SF3B2-202ENST00000524475 NPRL3Q12980 569 aa13.1□□□□□ -0.31
SF3B2-202ENST00000524475 KPNB1Q14974 876 aaKnown RBP13.1□□□□□ -0.31
SF3B2-202ENST00000524475 SGCAQ16586 387 aa13.1□□□□□ -0.31
SF3B2-202ENST00000524475 SLC36A3Q495N2 470 aa13.1□□□□□ -0.31
SF3B2-202ENST00000524475 ZNF362Q5T0B9 420 aaPredicted RBP13.1□□□□□ -0.31
SF3B2-202ENST00000524475 LEG1Q6P5S2 330 aa13.1□□□□□ -0.31
SF3B2-202ENST00000524475 B3GLCTQ6Y288 498 aa13.1□□□□□ -0.31
SF3B2-202ENST00000524475 ZNF584Q8IVC4 421 aa13.1□□□□□ -0.31
SF3B2-202ENST00000524475 HS3ST5Q8IZT8 346 aa13.1□□□□□ -0.31
SF3B2-202ENST00000524475 PARP8Q8N3A8 854 aa13.1□□□□□ -0.31
SF3B2-202ENST00000524475 SVOPLQ8N434 492 aa13.1□□□□□ -0.31
SF3B2-202ENST00000524475 OR4K13Q8NH42 304 aa13.1□□□□□ -0.31
SF3B2-202ENST00000524475 TEX47Q8TBZ9 253 aa13.1□□□□□ -0.31
SF3B2-202ENST00000524475 TMEM171Q8WVE6 324 aa13.1□□□□□ -0.31
SF3B2-202ENST00000524475 CENPNQ96H22 339 aaPredicted RBP13.1□□□□□ -0.31
SF3B2-202ENST00000524475 NMNAT3Q96T66 252 aa13.1□□□□□ -0.31
SF3B2-202ENST00000524475 OSBPL10Q9BXB5 764 aa13.1□□□□□ -0.31
SF3B2-202ENST00000524475 NUAK2Q9H093 628 aa13.1□□□□□ -0.31
SF3B2-202ENST00000524475 ZNF442Q9H7R0 627 aa13.1□□□□□ -0.31
SF3B2-202ENST00000524475 SEC61A2Q9H9S3 476 aa13.1□□□□□ -0.31
SF3B2-202ENST00000524475 ZNF701Q9NV72 531 aaPredicted RBP13.1□□□□□ -0.31
SF3B2-202ENST00000524475 KLHL21Q9UJP4 597 aa13.1□□□□□ -0.31
SF3B2-202ENST00000524475 B9D1Q9UPM9 204 aa13.1□□□□□ -0.31
SF3B2-202ENST00000524475 MOKQ9UQ07 419 aa13.1□□□□□ -0.31
SF3B2-202ENST00000524475 ITPR3Q14573 2671 aa13.09□□□□□ -0.31
SF3B2-202ENST00000524475 ZNF469Q96JG9 3925 aaPredicted RBP13.09□□□□□ -0.31
SF3B2-202ENST00000524475 A0A1W2PPL8 197 aa13.09□□□□□ -0.31
SF3B2-202ENST00000524475 OR6C68A6NDL8 312 aa13.09□□□□□ -0.31
SF3B2-202ENST00000524475 C12orf71A8MTZ7 269 aa13.09□□□□□ -0.31
SF3B2-202ENST00000524475 OVOL3O00110 214 aa13.09□□□□□ -0.31
SF3B2-202ENST00000524475 SOX14O95416 240 aa13.09□□□□□ -0.31
SF3B2-202ENST00000524475 PATE4P0C8F1 98 aa13.09□□□□□ -0.31
SF3B2-202ENST00000524475 GAAP10253 952 aa13.09□□□□□ -0.31
SF3B2-202ENST00000524475 APOBEC3AP31941 199 aaPredicted RBP13.09□□□□□ -0.31
SF3B2-202ENST00000524475 TTKP33981 857 aa13.09□□□□□ -0.31
SF3B2-202ENST00000524475 GRK5P34947 590 aa13.09□□□□□ -0.31
SF3B2-202ENST00000524475 NKX6-1P78426 367 aaPredicted RBP13.09□□□□□ -0.31
SF3B2-202ENST00000524475 GLO1Q04760 184 aa13.09□□□□□ -0.31
SF3B2-202ENST00000524475 GABPB1Q06547 395 aaPredicted RBP13.09□□□□□ -0.31
SF3B2-202ENST00000524475 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.09□□□□□ -0.31
SF3B2-202ENST00000524475 ENDOGQ14249 297 aaKnown RBP13.09□□□□□ -0.31
SF3B2-202ENST00000524475 RAB39AQ14964 217 aa13.09□□□□□ -0.31
SF3B2-202ENST00000524475 ETFDHQ16134 617 aa13.09□□□□□ -0.31
SF3B2-202ENST00000524475 AGAP6Q5VW22 663 aa13.09□□□□□ -0.31
SF3B2-202ENST00000524475 SLC27A4Q6P1M0 643 aa13.09□□□□□ -0.31
SF3B2-202ENST00000524475 ZDHHC13Q8IUH4 622 aa13.09□□□□□ -0.31
SF3B2-202ENST00000524475 OR6V1Q8N148 313 aa13.09□□□□□ -0.31
SF3B2-202ENST00000524475 LRRC18Q8N456 261 aa13.09□□□□□ -0.31
SF3B2-202ENST00000524475 ATG16L2Q8NAA4 619 aa13.09□□□□□ -0.31
SF3B2-202ENST00000524475 SDR9C7Q8NEX9 313 aa13.09□□□□□ -0.31
SF3B2-202ENST00000524475 OR4Q3Q8NH05 313 aa13.09□□□□□ -0.31
SF3B2-202ENST00000524475 FBXO17Q96EF6 278 aa13.09□□□□□ -0.31
SF3B2-202ENST00000524475 TRAF4Q9BUZ4 470 aaPredicted RBP13.09□□□□□ -0.31
SF3B2-202ENST00000524475 ZNF416Q9BWM5 594 aa13.09□□□□□ -0.31
SF3B2-202ENST00000524475 CXorf56Q9H5V9 222 aa13.09□□□□□ -0.31
SF3B2-202ENST00000524475 CCNB1IP1Q9NPC3 277 aa13.09□□□□□ -0.31
SF3B2-202ENST00000524475 CMC2Q9NRP2 79 aa13.09□□□□□ -0.31
SF3B2-202ENST00000524475 CA10Q9NS85 328 aa13.09□□□□□ -0.31
SF3B2-202ENST00000524475 COA3Q9Y2R0 106 aaPredicted RBP13.09□□□□□ -0.31
SF3B2-202ENST00000524475 ATP23Q9Y6H3 246 aa13.09□□□□□ -0.31
SF3B2-202ENST00000524475 RTTNQ86VV8 2226 aa13.08□□□□□ -0.32
SF3B2-202ENST00000524475 IQCMA0A1B0GVH7 501 aa13.08□□□□□ -0.32
SF3B2-202ENST00000524475 G3V2T6 193 aa13.08□□□□□ -0.32
SF3B2-202ENST00000524475 H3BN98 237 aa13.08□□□□□ -0.32
SF3B2-202ENST00000524475 DCTN6O00399 190 aa13.08□□□□□ -0.32
SF3B2-202ENST00000524475 IFNGP01579 166 aa13.08□□□□□ -0.32
SF3B2-202ENST00000524475 SOD3P08294 240 aa13.08□□□□□ -0.32
SF3B2-202ENST00000524475 IGFBP1P08833 259 aaPredicted RBP13.08□□□□□ -0.32
SF3B2-202ENST00000524475 COX5BP10606 129 aa13.08□□□□□ -0.32
SF3B2-202ENST00000524475 ZNF32P17041 273 aa13.08□□□□□ -0.32
SF3B2-202ENST00000524475 SLC25A1P53007 311 aa13.08□□□□□ -0.32
SF3B2-202ENST00000524475 HGFACQ04756 655 aa13.08□□□□□ -0.32
SF3B2-202ENST00000524475 PLP2Q04941 152 aa13.08□□□□□ -0.32
SF3B2-202ENST00000524475 AQP6Q13520 282 aa13.08□□□□□ -0.32
SF3B2-202ENST00000524475 C11orf71Q6IPW1 123 aa13.08□□□□□ -0.32
SF3B2-202ENST00000524475 FBXL14Q8N1E6 418 aa13.08□□□□□ -0.32
SF3B2-202ENST00000524475 SLC30A7Q8NEW0 376 aa13.08□□□□□ -0.32
SF3B2-202ENST00000524475 OR52E2Q8NGJ4 325 aa13.08□□□□□ -0.32
SF3B2-202ENST00000524475 OR1J2Q8NGS2 313 aa13.08□□□□□ -0.32
SF3B2-202ENST00000524475 LRTOMTQ8WZ04 291 aa13.08□□□□□ -0.32
SF3B2-202ENST00000524475 HTRA1Q92743 480 aa13.08□□□□□ -0.32
SF3B2-202ENST00000524475 MS4A3Q96HJ5 214 aa13.08□□□□□ -0.32
SF3B2-202ENST00000524475 RBM4Q9BWF3 364 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms