RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 ZNF343Q6P1L6 599 aa9.24□□□□□ -0.93
SPIDR-224ENST00000524126 Q6ZRG5 221 aa9.24□□□□□ -0.93
SPIDR-224ENST00000524126 OR13C8Q8NGS7 320 aa9.24□□□□□ -0.93
SPIDR-224ENST00000524126 WFDC5Q8TCV5 224 aa9.24□□□□□ -0.93
SPIDR-224ENST00000524126 ZNRF4Q8WWF5 429 aa9.24□□□□□ -0.93
SPIDR-224ENST00000524126 SCAMP4Q969E2 229 aa9.24□□□□□ -0.93
SPIDR-224ENST00000524126 NRTNQ99748 197 aa9.24□□□□□ -0.93
SPIDR-224ENST00000524126 LMAN2LQ9H0V9 348 aa9.24□□□□□ -0.93
SPIDR-224ENST00000524126 KCNE5Q9UJ90 142 aa9.24□□□□□ -0.93
SPIDR-224ENST00000524126 HDGFL3Q9Y3E1 203 aa9.24□□□□□ -0.93
SPIDR-224ENST00000524126 IGLV3-16A0A075B6K0 115 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 TRAV8-7A0A075B6U6 113 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 A0A1W2PS29 197 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 TSPAN11A1L157 253 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 ZNF727A8MUV8 499 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 PRR32B1ATL7 298 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 SEC14L6B5MCN3 397 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 MKRN2OSH3BPM6 223 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 NRG2O14511 850 aaPredicted RBP9.23□□□□□ -0.93
SPIDR-224ENST00000524126 HIST1H2BKO60814 126 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 RPP14O95059 124 aaKnown RBP9.23□□□□□ -0.93
SPIDR-224ENST00000524126 OR2C1O95371 312 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 ZIC2O95409 532 aaPredicted RBP9.23□□□□□ -0.93
SPIDR-224ENST00000524126 HMGN2P05204 90 aaKnown RBP9.23□□□□□ -0.93
SPIDR-224ENST00000524126 HIST1H2BJP06899 126 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 RNH1P13489 461 aaKnown RBP9.23□□□□□ -0.93
SPIDR-224ENST00000524126 HIST1H2BOP23527 126 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 VAMP1P23763 118 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 ZBTB25P24278 435 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 IL2RGP31785 369 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 HIST1H2BBP33778 126 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 SERPINF1P36955 418 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 CD200P41217 278 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 HIST1H2BDP58876 126 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 HIST1H2BCP62807 126 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 INSM1Q01101 510 aaPredicted RBP9.23□□□□□ -0.93
SPIDR-224ENST00000524126 EBPQ15125 230 aaKnown RBP9.23□□□□□ -0.93
SPIDR-224ENST00000524126 HIST2H2BEQ16778 126 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.23□□□□□ -0.93
SPIDR-224ENST00000524126 RPL7L1Q6DKI1 246 aaKnown RBP9.23□□□□□ -0.93
SPIDR-224ENST00000524126 NPSR1Q6W5P4 371 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 PNLDC1Q8NA58 520 aaKnown RBP9.23□□□□□ -0.93
SPIDR-224ENST00000524126 HIST1H2BHQ93079 126 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 CD180Q99467 661 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 CDCA3Q99618 268 aaPredicted RBP9.23□□□□□ -0.93
SPIDR-224ENST00000524126 HIST1H2BNQ99877 126 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 HIST1H2BMQ99879 126 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 ZMAT3Q9HA38 289 aaKnown RBP9.23□□□□□ -0.93
SPIDR-224ENST00000524126 OR5AC2Q9NZP5 309 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 KCNIP3Q9Y2W7 256 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 DYRK1BQ9Y463 629 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 ARID1AO14497 2285 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 A0A087WV62 115 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 A0A1B0GTH9 108 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 RIIAD1A6NNX1 92 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 UMAD1C9J7I0 102 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 TSPAN6O43657 245 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 TMPRSS11DO60235 418 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 KHKP50053 298 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 SKP1P63208 163 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 ACTC1P68032 377 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 ACTA1P68133 377 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 EIF2B1Q14232 305 aaKnown RBP9.23□□□□□ -0.93
SPIDR-224ENST00000524126 MESTQ5EB52 335 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 KHDRBS2Q5VWX1 349 aaKnown RBP9.23□□□□□ -0.93
SPIDR-224ENST00000524126 CD163Q86VB7 1156 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 FAM129CQ86XR2 697 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 SLC35F2Q8IXU6 374 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 ZNF664Q8N3J9 261 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 ZNF610Q8N9Z0 462 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 NAXEQ8NCW5 288 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 SAT2Q96F10 170 aaPredicted RBP9.23□□□□□ -0.93
SPIDR-224ENST00000524126 THOC3Q96J01 351 aaKnown RBP9.23□□□□□ -0.93
SPIDR-224ENST00000524126 YPEL4Q96NS1 127 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 SLC6A7Q99884 636 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 NDUFAF3Q9BU61 184 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 ZNF426Q9BUY5 554 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 BCL2L10Q9HD36 194 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 CHRNA9Q9UGM1 479 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 MRPS33Q9Y291 106 aaKnown RBP9.23□□□□□ -0.93
SPIDR-224ENST00000524126 WIF1Q9Y5W5 379 aa9.23□□□□□ -0.93
SPIDR-224ENST00000524126 SLC5A10A0PJK1 596 aa9.22□□□□□ -0.93
SPIDR-224ENST00000524126 OR5H15A6NDH6 313 aa9.22□□□□□ -0.93
SPIDR-224ENST00000524126 OR5H1A6NKK0 313 aa9.22□□□□□ -0.93
SPIDR-224ENST00000524126 PPP1R2P9O14990 202 aa9.22□□□□□ -0.93
SPIDR-224ENST00000524126 FCMRO60667 390 aa9.22□□□□□ -0.93
SPIDR-224ENST00000524126 PLGP00747 810 aaPredicted RBP9.22□□□□□ -0.93
SPIDR-224ENST00000524126 CATP04040 527 aaKnown RBP9.22□□□□□ -0.93
SPIDR-224ENST00000524126 CXCL1P09341 107 aa9.22□□□□□ -0.93
SPIDR-224ENST00000524126 ZNF735P0CB33 412 aa9.22□□□□□ -0.93
SPIDR-224ENST00000524126 NCBP2P52298 156 aaKnown RBP eCLIP9.22□□□□□ -0.93
SPIDR-224ENST00000524126 HNRNPKP61978 463 aaKnown RBP eCLIP9.22□□□□□ -0.93
SPIDR-224ENST00000524126 RAP1AP62834 184 aa9.22□□□□□ -0.93
SPIDR-224ENST00000524126 LYG2Q86SG7 212 aa9.22□□□□□ -0.93
SPIDR-224ENST00000524126 FOXRED2Q8IWF2 684 aa9.22□□□□□ -0.93
SPIDR-224ENST00000524126 CBARPQ8N350 705 aaPredicted RBP9.22□□□□□ -0.93
SPIDR-224ENST00000524126 ADAD2Q8NCV1 583 aaKnown RBP9.22□□□□□ -0.93
SPIDR-224ENST00000524126 FBXO22Q8NEZ5 403 aa9.22□□□□□ -0.93
SPIDR-224ENST00000524126 OR7G2Q8NG99 324 aa9.22□□□□□ -0.93
SPIDR-224ENST00000524126 OR4S1Q8NGB4 309 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms