RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 ZNF679Q8IYX0 411 aa8.21□□□□□ -1.1
CSMD1-212ENST00000523387 TMEM229BQ8NBD8 167 aa8.21□□□□□ -1.1
CSMD1-212ENST00000523387 NUDCD2Q8WVJ2 157 aa8.21□□□□□ -1.1
CSMD1-212ENST00000523387 STACQ99469 402 aa8.21□□□□□ -1.1
CSMD1-212ENST00000523387 TLNRD1Q9H1K6 362 aa8.21□□□□□ -1.1
CSMD1-212ENST00000523387 MBNL1Q9NR56 388 aaKnown RBP8.21□□□□□ -1.1
CSMD1-212ENST00000523387 C14orf166Q9Y224 244 aaKnown RBP8.21□□□□□ -1.1
CSMD1-212ENST00000523387 LSM5Q9Y4Y9 91 aaKnown RBP8.21□□□□□ -1.1
CSMD1-212ENST00000523387 A0A1W2PQU0 124 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 ZNF254O75437 659 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 ZIC2O95409 532 aaPredicted RBP8.2□□□□□ -1.1
CSMD1-212ENST00000523387 MPIG6BO95866 241 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 SFTA3P0C7M3 94 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 SMIM6P0DI80 62 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 SEC13P55735 322 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 IKZF1Q13422 519 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 DEFB110Q30KQ9 67 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 SLC25A24Q6NUK1 477 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 MOB3CQ70IA8 216 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 SLC25A28Q96A46 364 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 FBXO17Q96EF6 278 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 ZNF681Q96N22 645 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 DEFB118Q96PH6 123 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 ZFYVE21Q9BQ24 234 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 FLRT3Q9NZU0 649 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 PCYT1BQ9Y5K3 369 aaPredicted RBP8.2□□□□□ -1.1
CSMD1-212ENST00000523387 BORCS7-ASMTA0A0B4J1R7 106 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 LINC00587B1AMM8 73 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 BRINP1O60477 761 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 ALOX12BO75342 701 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 EIF3GO75821 320 aaKnown RBP eCLIP8.2□□□□□ -1.1
CSMD1-212ENST00000523387 HCKP08631 526 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 H2BFMP0C1H6 154 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 CLDN6P56747 220 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 IL10RAQ13651 578 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 RNF212Q495C1 297 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 AWAT2Q6E213 333 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 COX15Q7KZN9 410 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 SLC36A1Q7Z2H8 476 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 FJX1Q86VR8 437 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 ZNF561Q8N587 486 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 FRMD1Q8N878 549 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 OR51A4Q8NGJ6 313 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 OR5H2Q8NGV7 314 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 NUBPLQ8TB37 319 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 EDAQ92838 391 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 SFXN1Q9H9B4 322 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 POLMQ9NP87 494 aaPredicted RBP8.2□□□□□ -1.1
CSMD1-212ENST00000523387 MMP26Q9NRE1 261 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 FRRS1LQ9P0K9 344 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 MRM2Q9UI43 246 aaKnown RBP8.2□□□□□ -1.1
CSMD1-212ENST00000523387 KCNG2Q9UJ96 466 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 ATXN7L1Q9ULK2 861 aaPredicted RBP8.2□□□□□ -1.1
CSMD1-212ENST00000523387 TP53BP1Q12888 1972 aaPredicted RBP8.2□□□□□ -1.1
CSMD1-212ENST00000523387 SCN10AQ9Y5Y9 1956 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 CXorf51AA0A1B0GTR3 108 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 RHPN2P1A8MT19 583 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 PRRT4C9JH25 899 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 RNASEK-C17orf49H0YIS7 233 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 ACRP10323 421 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 PNMTP11086 282 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 CALCRP30988 508 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 RGS19P49795 217 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 NPY4RP50391 375 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 RHEBQ15382 184 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 C14orf28Q4W4Y0 310 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 JMJD6Q6NYC1 403 aaPredicted RBP8.2□□□□□ -1.1
CSMD1-212ENST00000523387 CNKSR3Q6P9H4 555 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 USP53Q70EK8 1073 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 OR4K15Q8NH41 348 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 ZPLD1Q8TCW7 415 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 ST7LQ8TDW4 575 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 AKR1E2Q96JD6 320 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 FN3KRPQ9HA64 309 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 PNO1Q9NRX1 252 aaKnown RBP8.2□□□□□ -1.1
CSMD1-212ENST00000523387 CHRNA9Q9UGM1 479 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 MAFFQ9ULX9 164 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 PCNTO95613 3336 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 C4orf51C9J302 202 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 H0YGG7 62 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 PI3P19957 117 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 CDKN2AP42771 156 aaKnown RBP8.2□□□□□ -1.1
CSMD1-212ENST00000523387 GUCA1AP43080 201 aaPredicted RBP8.2□□□□□ -1.1
CSMD1-212ENST00000523387 GLP1RP43220 463 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 RAB5CP51148 216 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 ARF3P61204 181 aaPredicted RBP8.2□□□□□ -1.1
CSMD1-212ENST00000523387 RPS11P62280 158 aaKnown RBP eCLIP8.2□□□□□ -1.1
CSMD1-212ENST00000523387 TDGQ13569 410 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 ZIC1Q15915 447 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 HFEQ30201 348 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 TMEM52BQ4KMG9 183 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 VWA2Q5GFL6 755 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 OR52W1Q6IF63 320 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 ZAR1Q86SH2 424 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 ZNF440Q8IYI8 595 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 METTL27Q8N6F8 245 aaPredicted RBP8.2□□□□□ -1.1
CSMD1-212ENST00000523387 FGF13Q92913 245 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 TIMM29Q9BSF4 260 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 TAF9BQ9HBM6 251 aa8.2□□□□□ -1.1
CSMD1-212ENST00000523387 HRASLS2Q9NWW9 162 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms