RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 NR1H2P55055 460 aa18.84■□□□□ 0.61
R3HCC1-208ENST00000522012 ZNF85Q03923 595 aa18.84■□□□□ 0.61
R3HCC1-208ENST00000522012 FAPQ12884 760 aa18.84■□□□□ 0.61
R3HCC1-208ENST00000522012 TBCEQ15813 527 aaPredicted RBP18.84■□□□□ 0.61
R3HCC1-208ENST00000522012 XAF1Q6GPH4 301 aa18.84■□□□□ 0.61
R3HCC1-208ENST00000522012 RFLNBQ8N5W9 214 aa18.84■□□□□ 0.61
R3HCC1-208ENST00000522012 NANOGP1Q8N7R0 232 aa18.84■□□□□ 0.61
R3HCC1-208ENST00000522012 OR6K3Q8NGY3 331 aa18.84■□□□□ 0.61
R3HCC1-208ENST00000522012 THEM6Q8WUY1 208 aa18.84■□□□□ 0.61
R3HCC1-208ENST00000522012 MND1Q9BWT6 205 aa18.84■□□□□ 0.61
R3HCC1-208ENST00000522012 TTTY10Q9BZA0 68 aa18.84■□□□□ 0.61
R3HCC1-208ENST00000522012 POLE4Q9NR33 117 aa18.84■□□□□ 0.61
R3HCC1-208ENST00000522012 LAMP5Q9UJQ1 280 aa18.84■□□□□ 0.61
R3HCC1-208ENST00000522012 LCKP06239 509 aa18.83■□□□□ 0.6
R3HCC1-208ENST00000522012 PSKH1P11801 424 aa18.83■□□□□ 0.6
R3HCC1-208ENST00000522012 RPL5P46777 297 aaKnown RBP18.83■□□□□ 0.6
R3HCC1-208ENST00000522012 PMPCAQ10713 525 aa18.83■□□□□ 0.6
R3HCC1-208ENST00000522012 GALEQ14376 348 aa18.83■□□□□ 0.6
R3HCC1-208ENST00000522012 OR2G6Q5TZ20 316 aa18.83■□□□□ 0.6
R3HCC1-208ENST00000522012 C9orf135Q5VTT2 229 aa18.83■□□□□ 0.6
R3HCC1-208ENST00000522012 FBXW9Q5XUX1 488 aa18.83■□□□□ 0.6
R3HCC1-208ENST00000522012 VWA1Q6PCB0 445 aa18.83■□□□□ 0.6
R3HCC1-208ENST00000522012 FOXL2NBQ6ZUU3 175 aa18.83■□□□□ 0.6
R3HCC1-208ENST00000522012 SSX6Q7RTT6 188 aa18.83■□□□□ 0.6
R3HCC1-208ENST00000522012 KLHL36Q8N4N3 616 aa18.83■□□□□ 0.6
R3HCC1-208ENST00000522012 RORBQ92753 470 aa18.83■□□□□ 0.6
R3HCC1-208ENST00000522012 MNTQ99583 582 aa18.83■□□□□ 0.6
R3HCC1-208ENST00000522012 ZNF649Q9BS31 505 aa18.83■□□□□ 0.6
R3HCC1-208ENST00000522012 ALG8Q9BVK2 526 aa18.83■□□□□ 0.6
R3HCC1-208ENST00000522012 KCNG2Q9UJ96 466 aa18.83■□□□□ 0.6
R3HCC1-208ENST00000522012 POLR1DQ9Y2S0 133 aa18.83■□□□□ 0.6
R3HCC1-208ENST00000522012 KLHDC2Q9Y2U9 406 aa18.83■□□□□ 0.6
R3HCC1-208ENST00000522012 TMEM14AQ9Y6G1 99 aa18.83■□□□□ 0.6
R3HCC1-208ENST00000522012 ATXN7O15265 892 aaPredicted RBP18.82■□□□□ 0.6
R3HCC1-208ENST00000522012 TMCC2O75069 709 aa18.82■□□□□ 0.6
R3HCC1-208ENST00000522012 SEC14L2O76054 403 aa18.82■□□□□ 0.6
R3HCC1-208ENST00000522012 CRHP06850 196 aa18.82■□□□□ 0.6
R3HCC1-208ENST00000522012 MSR1P21757 451 aa18.82■□□□□ 0.6
R3HCC1-208ENST00000522012 CASP6P55212 293 aa18.82■□□□□ 0.6
R3HCC1-208ENST00000522012 MRPS34P82930 218 aaKnown RBP18.82■□□□□ 0.6
R3HCC1-208ENST00000522012 MED22Q15528 200 aa18.82■□□□□ 0.6
R3HCC1-208ENST00000522012 KCNMB1Q16558 191 aa18.82■□□□□ 0.6
R3HCC1-208ENST00000522012 EIF2S3LQ2VIR3 472 aaKnown RBP18.82■□□□□ 0.6
R3HCC1-208ENST00000522012 TEX30Q5JUR7 227 aa18.82■□□□□ 0.6
R3HCC1-208ENST00000522012 TFAP2EQ6VUC0 442 aa18.82■□□□□ 0.6
R3HCC1-208ENST00000522012 ABHD12BQ7Z5M8 362 aaPredicted RBP18.82■□□□□ 0.6
R3HCC1-208ENST00000522012 BTLAQ7Z6A9 289 aa18.82■□□□□ 0.6
R3HCC1-208ENST00000522012 ATCAYQ86WG3 371 aa18.82■□□□□ 0.6
R3HCC1-208ENST00000522012 LINC00346Q8IVM7 164 aa18.82■□□□□ 0.6
R3HCC1-208ENST00000522012 OTOSQ8NHW6 89 aa18.82■□□□□ 0.6
R3HCC1-208ENST00000522012 ZFP3Q96NJ6 502 aa18.82■□□□□ 0.6
R3HCC1-208ENST00000522012 FOXB1Q99853 325 aa18.82■□□□□ 0.6
R3HCC1-208ENST00000522012 NELFAQ9H3P2 528 aa18.82■□□□□ 0.6
R3HCC1-208ENST00000522012 TMEM38BQ9NVV0 291 aa18.82■□□□□ 0.6
R3HCC1-208ENST00000522012 TRGV8A0A0C4DH27 118 aa18.81■□□□□ 0.6
R3HCC1-208ENST00000522012 TMEM129A0AVI4 362 aa18.81■□□□□ 0.6
R3HCC1-208ENST00000522012 RPL36A-HNRNPH2H7BZ11 118 aa18.81■□□□□ 0.6
R3HCC1-208ENST00000522012 TNFSF13O75888 250 aa18.81■□□□□ 0.6
R3HCC1-208ENST00000522012 INMTO95050 263 aa18.81■□□□□ 0.6
R3HCC1-208ENST00000522012 JUNBP17275 347 aaPredicted RBP18.81■□□□□ 0.6
R3HCC1-208ENST00000522012 ALOX5APP20292 161 aa18.81■□□□□ 0.6
R3HCC1-208ENST00000522012 NPR2P20594 1047 aa18.81■□□□□ 0.6
R3HCC1-208ENST00000522012 CEACAM8P31997 349 aaPredicted RBP18.81■□□□□ 0.6
R3HCC1-208ENST00000522012 CD79BP40259 229 aa18.81■□□□□ 0.6
R3HCC1-208ENST00000522012 EIF2B1Q14232 305 aaKnown RBP18.81■□□□□ 0.6
R3HCC1-208ENST00000522012 SLC18B1Q6NT16 456 aa18.81■□□□□ 0.6
R3HCC1-208ENST00000522012 TMPRSS11AQ6ZMR5 421 aa18.81■□□□□ 0.6
R3HCC1-208ENST00000522012 NAXEQ8NCW5 288 aa18.81■□□□□ 0.6
R3HCC1-208ENST00000522012 SNX33Q8WV41 574 aa18.81■□□□□ 0.6
R3HCC1-208ENST00000522012 GATAD2BQ8WXI9 593 aa18.81■□□□□ 0.6
R3HCC1-208ENST00000522012 FCGR1BQ92637 280 aa18.81■□□□□ 0.6
R3HCC1-208ENST00000522012 NABP1Q96AH0 204 aa18.81■□□□□ 0.6
R3HCC1-208ENST00000522012 OR5M11Q96RB7 305 aa18.81■□□□□ 0.6
R3HCC1-208ENST00000522012 CAB39Q9Y376 341 aaPredicted RBP18.81■□□□□ 0.6
R3HCC1-208ENST00000522012 IGSF10Q6WRI0 2623 aa18.81■□□□□ 0.6
R3HCC1-208ENST00000522012 ZNF99A8MXY4 864 aaPredicted RBP18.8■□□□□ 0.6
R3HCC1-208ENST00000522012 MAGEB4O15481 346 aaPredicted RBP18.8■□□□□ 0.6
R3HCC1-208ENST00000522012 B4GALT1P15291 398 aa18.8■□□□□ 0.6
R3HCC1-208ENST00000522012 PSMB9P28065 219 aa18.8■□□□□ 0.6
R3HCC1-208ENST00000522012 FOXG1P55316 489 aaPredicted RBP18.8■□□□□ 0.6
R3HCC1-208ENST00000522012 ARF1P84077 181 aaKnown RBP18.8■□□□□ 0.6
R3HCC1-208ENST00000522012 SPHARQ15513 63 aa18.8■□□□□ 0.6
R3HCC1-208ENST00000522012 UBE2UQ5VVX9 321 aa18.8■□□□□ 0.6
R3HCC1-208ENST00000522012 CORO6Q6QEF8 472 aa18.8■□□□□ 0.6
R3HCC1-208ENST00000522012 LRRC18Q8N456 261 aa18.8■□□□□ 0.6
R3HCC1-208ENST00000522012 ZNF454Q8N9F8 522 aa18.8■□□□□ 0.6
R3HCC1-208ENST00000522012 OR2AJ1Q8NGZ0 328 aa18.8■□□□□ 0.6
R3HCC1-208ENST00000522012 SPRYD4Q8WW59 207 aaPredicted RBP18.8■□□□□ 0.6
R3HCC1-208ENST00000522012 MUL1Q969V5 352 aa18.8■□□□□ 0.6
R3HCC1-208ENST00000522012 STARD4Q96DR4 205 aa18.8■□□□□ 0.6
R3HCC1-208ENST00000522012 MRPL48Q96GC5 212 aaKnown RBP18.8■□□□□ 0.6
R3HCC1-208ENST00000522012 ISG20L2Q9H9L3 353 aaKnown RBP18.8■□□□□ 0.6
R3HCC1-208ENST00000522012 SIAEQ9HAT2 523 aa18.8■□□□□ 0.6
R3HCC1-208ENST00000522012 PLSCR4Q9NRQ2 329 aa18.8■□□□□ 0.6
R3HCC1-208ENST00000522012 MALT1Q9UDY8 824 aa18.8■□□□□ 0.6
R3HCC1-208ENST00000522012 PROCRQ9UNN8 238 aa18.8■□□□□ 0.6
R3HCC1-208ENST00000522012 SMG1Q96Q15 3661 aaKnown RBP18.8■□□□□ 0.6
R3HCC1-208ENST00000522012 ALPK2Q86TB3 2170 aa18.8■□□□□ 0.6
R3HCC1-208ENST00000522012 J3QLW9 94 aa18.79■□□□□ 0.6
R3HCC1-208ENST00000522012 PSMD9O00233 223 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms