RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 C11orf40Q8WZ69 217 aa21.17■□□□□ 0.98
PVT1-212ENST00000521951 Q96MT0 163 aa21.17■□□□□ 0.98
PVT1-212ENST00000521951 MRPL22Q9NWU5 206 aaKnown RBP21.17■□□□□ 0.98
PVT1-212ENST00000521951 OR8G3PP0DMU2 310 aa21.16■□□□□ 0.98
PVT1-212ENST00000521951 MSR1P21757 451 aa21.16■□□□□ 0.98
PVT1-212ENST00000521951 CCKARP32238 428 aa21.16■□□□□ 0.98
PVT1-212ENST00000521951 BLVRAP53004 296 aa21.16■□□□□ 0.98
PVT1-212ENST00000521951 CDH11P55287 796 aa21.16■□□□□ 0.98
PVT1-212ENST00000521951 CDK5R2Q13319 367 aa21.16■□□□□ 0.98
PVT1-212ENST00000521951 KCNMB1Q16558 191 aa21.16■□□□□ 0.98
PVT1-212ENST00000521951 MEP1BQ16820 701 aa21.16■□□□□ 0.98
PVT1-212ENST00000521951 TBRG1Q3YBR2 411 aa21.16■□□□□ 0.98
PVT1-212ENST00000521951 NRN1LQ496H8 165 aa21.16■□□□□ 0.98
PVT1-212ENST00000521951 UGT2A3Q6UWM9 527 aa21.16■□□□□ 0.98
PVT1-212ENST00000521951 SKA3Q8IX90 412 aa21.16■□□□□ 0.98
PVT1-212ENST00000521951 STEAP2Q8NFT2 490 aa21.16■□□□□ 0.98
PVT1-212ENST00000521951 FBLIM1Q8WUP2 373 aa21.16■□□□□ 0.98
PVT1-212ENST00000521951 SH3GL3Q99963 347 aa21.16■□□□□ 0.98
PVT1-212ENST00000521951 EMC7Q9NPA0 242 aa21.16■□□□□ 0.98
PVT1-212ENST00000521951 DOPEY1Q5JWR5 2465 aa21.16■□□□□ 0.98
PVT1-212ENST00000521951 SLC22A31A6NKX4 558 aa21.15■□□□□ 0.98
PVT1-212ENST00000521951 GSTT1P30711 240 aa21.15■□□□□ 0.98
PVT1-212ENST00000521951 HTR1FP30939 366 aa21.15■□□□□ 0.98
PVT1-212ENST00000521951 TEKQ02763 1124 aa21.15■□□□□ 0.98
PVT1-212ENST00000521951 FAM27BQ5VT28 67 aa21.15■□□□□ 0.98
PVT1-212ENST00000521951 ZSCAN2Q7Z7L9 614 aaPredicted RBP21.15■□□□□ 0.98
PVT1-212ENST00000521951 LRRC18Q8N456 261 aa21.15■□□□□ 0.98
PVT1-212ENST00000521951 RFKQ969G6 155 aa21.15■□□□□ 0.98
PVT1-212ENST00000521951 S100PBPQ96BU1 408 aa21.15■□□□□ 0.98
PVT1-212ENST00000521951 DENRO43583 198 aaKnown RBP21.14■□□□□ 0.98
PVT1-212ENST00000521951 FARS2O95363 451 aaKnown RBP21.14■□□□□ 0.98
PVT1-212ENST00000521951 HRGP04196 525 aa21.14■□□□□ 0.98
PVT1-212ENST00000521951 SMN1Q16637 294 aaKnown RBP21.14■□□□□ 0.98
PVT1-212ENST00000521951 LCN1P1Q5VSP4 162 aa21.14■□□□□ 0.98
PVT1-212ENST00000521951 CNBD2Q96M20 576 aa21.14■□□□□ 0.98
PVT1-212ENST00000521951 ACTR6Q9GZN1 396 aa21.14■□□□□ 0.98
PVT1-212ENST00000521951 Q9H521 79 aa21.14■□□□□ 0.98
PVT1-212ENST00000521951 MARCH7Q9H992 704 aa21.14■□□□□ 0.98
PVT1-212ENST00000521951 SLC17A5Q9NRA2 495 aa21.14■□□□□ 0.98
PVT1-212ENST00000521951 WARS2Q9UGM6 360 aaKnown RBP21.14■□□□□ 0.98
PVT1-212ENST00000521951 HOXB1P14653 301 aaPredicted RBP21.14■□□□□ 0.97
PVT1-212ENST00000521951 NUDT6P53370 316 aa21.14■□□□□ 0.97
PVT1-212ENST00000521951 LSM6P62312 80 aaKnown RBP21.14■□□□□ 0.97
PVT1-212ENST00000521951 ENDOGQ14249 297 aaKnown RBP21.14■□□□□ 0.97
PVT1-212ENST00000521951 LAIR2Q6ISS4 152 aa21.14■□□□□ 0.97
PVT1-212ENST00000521951 C17orf78Q8N4C9 275 aa21.14■□□□□ 0.97
PVT1-212ENST00000521951 WDR31Q8NA23 367 aa21.14■□□□□ 0.97
PVT1-212ENST00000521951 OR10H5Q8NGA6 315 aa21.14■□□□□ 0.97
PVT1-212ENST00000521951 ZNF416Q9BWM5 594 aa21.14■□□□□ 0.97
PVT1-212ENST00000521951 OR10A4Q9H209 315 aa21.14■□□□□ 0.97
PVT1-212ENST00000521951 WDR76Q9H967 626 aa21.14■□□□□ 0.97
PVT1-212ENST00000521951 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP21.14■□□□□ 0.97
PVT1-212ENST00000521951 COMMD3-BMI1R4GMX3 469 aa21.14■□□□□ 0.97
PVT1-212ENST00000521951 PRR14LQ5THK1 2151 aa21.13■□□□□ 0.97
PVT1-212ENST00000521951 SH3D21A4FU49 640 aa21.13■□□□□ 0.97
PVT1-212ENST00000521951 OR5H1A6NKK0 313 aa21.13■□□□□ 0.97
PVT1-212ENST00000521951 CST2P09228 141 aa21.13■□□□□ 0.97
PVT1-212ENST00000521951 ZNF823P16415 610 aa21.13■□□□□ 0.97
PVT1-212ENST00000521951 TMED1Q13445 227 aa21.13■□□□□ 0.97
PVT1-212ENST00000521951 SLC16A14Q7RTX9 510 aa21.13■□□□□ 0.97
PVT1-212ENST00000521951 TIGD4Q8IY51 512 aa21.13■□□□□ 0.97
PVT1-212ENST00000521951 FGFBP3Q8TAT2 258 aa21.13■□□□□ 0.97
PVT1-212ENST00000521951 AMBNQ9NP70 447 aa21.13■□□□□ 0.97
PVT1-212ENST00000521951 NPDC1Q9NQX5 325 aaPredicted RBP21.13■□□□□ 0.97
PVT1-212ENST00000521951 HAO2Q9NYQ3 351 aa21.13■□□□□ 0.97
PVT1-212ENST00000521951 ZNF224Q9NZL3 707 aa21.13■□□□□ 0.97
PVT1-212ENST00000521951 LRRC42Q9Y546 428 aa21.13■□□□□ 0.97
PVT1-212ENST00000521951 A0A1W2PR80 420 aa21.12■□□□□ 0.97
PVT1-212ENST00000521951 SNTNA6NMZ2 147 aa21.12■□□□□ 0.97
PVT1-212ENST00000521951 PATE4P0C8F1 98 aa21.12■□□□□ 0.97
PVT1-212ENST00000521951 GGTLC2Q14390 218 aa21.12■□□□□ 0.97
PVT1-212ENST00000521951 TIMM23BQ5SRD1 257 aa21.12■□□□□ 0.97
PVT1-212ENST00000521951 C22orf34Q6ZV56 151 aa21.12■□□□□ 0.97
PVT1-212ENST00000521951 P2RY8Q86VZ1 359 aa21.12■□□□□ 0.97
PVT1-212ENST00000521951 ERI1Q8IV48 349 aaKnown RBP21.12■□□□□ 0.97
PVT1-212ENST00000521951 FBXO17Q96EF6 278 aa21.12■□□□□ 0.97
PVT1-212ENST00000521951 INTS14Q96SY0 518 aa21.12■□□□□ 0.97
PVT1-212ENST00000521951 USB1Q9BQ65 265 aaKnown RBP21.12■□□□□ 0.97
PVT1-212ENST00000521951 HELZ2Q9BYK8 2649 aaKnown RBP21.11■□□□□ 0.97
PVT1-212ENST00000521951 ZNF503-AS2A6NEH8 195 aa21.11■□□□□ 0.97
PVT1-212ENST00000521951 SELENOFO60613 162 aa21.11■□□□□ 0.97
PVT1-212ENST00000521951 HLA-HP01893 362 aa21.11■□□□□ 0.97
PVT1-212ENST00000521951 CAPZA2P47755 286 aa21.11■□□□□ 0.97
PVT1-212ENST00000521951 UBE2NP61088 152 aaKnown RBP21.11■□□□□ 0.97
PVT1-212ENST00000521951 TUBA1BP68363 451 aa21.11■□□□□ 0.97
PVT1-212ENST00000521951 TUBA4AP68366 448 aa21.11■□□□□ 0.97
PVT1-212ENST00000521951 ADAM8P78325 824 aa21.11■□□□□ 0.97
PVT1-212ENST00000521951 SORDQ00796 357 aa21.11■□□□□ 0.97
PVT1-212ENST00000521951 TUBA1AQ71U36 451 aa21.11■□□□□ 0.97
PVT1-212ENST00000521951 CCDC36Q8IYA8 594 aa21.11■□□□□ 0.97
PVT1-212ENST00000521951 OR52N5Q8NH56 324 aa21.11■□□□□ 0.97
PVT1-212ENST00000521951 KCNN2Q9H2S1 579 aa21.11■□□□□ 0.97
PVT1-212ENST00000521951 PCDHGB5Q9Y5G0 923 aa21.11■□□□□ 0.97
PVT1-212ENST00000521951 ARPC4-TTLL3A0A0A6YYG9 625 aa21.1■□□□□ 0.97
PVT1-212ENST00000521951 C12orf71A8MTZ7 269 aa21.1■□□□□ 0.97
PVT1-212ENST00000521951 ZNF593O00488 134 aaPredicted RBP21.1■□□□□ 0.97
PVT1-212ENST00000521951 MRPL3P09001 348 aaKnown RBP21.1■□□□□ 0.97
PVT1-212ENST00000521951 PSKH1P11801 424 aa21.1■□□□□ 0.97
PVT1-212ENST00000521951 HOXC12P31275 282 aa21.1■□□□□ 0.97
PVT1-212ENST00000521951 NAA10P41227 235 aaPredicted RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms