RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 IGHMP01871 453 aa16.72■□□□□ 0.27
PABPC1-215ENST00000520804 IFI30P13284 250 aa16.72■□□□□ 0.27
PABPC1-215ENST00000520804 GDI2P50395 445 aaKnown RBP16.72■□□□□ 0.27
PABPC1-215ENST00000520804 ZNF81P51508 661 aa16.72■□□□□ 0.27
PABPC1-215ENST00000520804 RPL27P61353 136 aaKnown RBP16.72■□□□□ 0.27
PABPC1-215ENST00000520804 ERVK-25P63136 954 aa16.72■□□□□ 0.27
PABPC1-215ENST00000520804 SELENOWP63302 87 aa16.72■□□□□ 0.27
PABPC1-215ENST00000520804 ZNF718Q3SXZ3 478 aa16.72■□□□□ 0.27
PABPC1-215ENST00000520804 THEM4Q5T1C6 240 aa16.72■□□□□ 0.27
PABPC1-215ENST00000520804 ACSM5Q6NUN0 579 aa16.72■□□□□ 0.27
PABPC1-215ENST00000520804 SHQ1Q6PI26 577 aaKnown RBP16.72■□□□□ 0.27
PABPC1-215ENST00000520804 UNQ6126/PRO20091Q6UXV3 157 aa16.72■□□□□ 0.27
PABPC1-215ENST00000520804 OR2T12Q8NG77 320 aa16.72■□□□□ 0.27
PABPC1-215ENST00000520804 AKR7LQ8NHP1 331 aa16.72■□□□□ 0.27
PABPC1-215ENST00000520804 FNDC8Q8TC99 324 aa16.72■□□□□ 0.27
PABPC1-215ENST00000520804 MARS2Q96GW9 593 aaKnown RBP16.72■□□□□ 0.27
PABPC1-215ENST00000520804 RBP7Q96R05 134 aa16.72■□□□□ 0.27
PABPC1-215ENST00000520804 SAP30LQ9HAJ7 183 aa16.72■□□□□ 0.27
PABPC1-215ENST00000520804 CLDN25C9JDP6 229 aa16.71■□□□□ 0.27
PABPC1-215ENST00000520804 SASH3O75995 380 aa16.71■□□□□ 0.27
PABPC1-215ENST00000520804 PNPP00491 289 aa16.71■□□□□ 0.27
PABPC1-215ENST00000520804 GCH1P30793 250 aa16.71■□□□□ 0.27
PABPC1-215ENST00000520804 IFNA8P32881 189 aa16.71■□□□□ 0.27
PABPC1-215ENST00000520804 MMP15P51511 669 aa16.71■□□□□ 0.27
PABPC1-215ENST00000520804 CTXN1P60606 82 aa16.71■□□□□ 0.27
PABPC1-215ENST00000520804 SF3A3Q12874 501 aaKnown RBP eCLIP16.71■□□□□ 0.27
PABPC1-215ENST00000520804 SCGB2A2Q13296 93 aa16.71■□□□□ 0.27
PABPC1-215ENST00000520804 HFEQ30201 348 aa16.71■□□□□ 0.27
PABPC1-215ENST00000520804 TMEM255AQ5JRV8 349 aa16.71■□□□□ 0.27
PABPC1-215ENST00000520804 FAM209AQ5JX71 171 aa16.71■□□□□ 0.27
PABPC1-215ENST00000520804 SPATA46Q5T0L3 261 aa16.71■□□□□ 0.27
PABPC1-215ENST00000520804 CGB2Q6NT52 195 aa16.71■□□□□ 0.27
PABPC1-215ENST00000520804 FAHD2BQ6P2I3 314 aaPredicted RBP16.71■□□□□ 0.27
PABPC1-215ENST00000520804 MICU2Q8IYU8 434 aa16.71■□□□□ 0.27
PABPC1-215ENST00000520804 CLDN22Q8N7P3 220 aa16.71■□□□□ 0.27
PABPC1-215ENST00000520804 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.71■□□□□ 0.27
PABPC1-215ENST00000520804 LRRC75AQ8NAA5 344 aa16.71■□□□□ 0.27
PABPC1-215ENST00000520804 SLC25A40Q8TBP6 338 aa16.71■□□□□ 0.27
PABPC1-215ENST00000520804 IPCEF1Q8WWN9 437 aaPredicted RBP16.71■□□□□ 0.27
PABPC1-215ENST00000520804 RAB39BQ96DA2 213 aa16.71■□□□□ 0.27
PABPC1-215ENST00000520804 FAHD2AQ96GK7 314 aa16.71■□□□□ 0.27
PABPC1-215ENST00000520804 G6PC2Q9NQR9 355 aa16.71■□□□□ 0.27
PABPC1-215ENST00000520804 FGFR1OP2Q9NVK5 253 aa16.71■□□□□ 0.27
PABPC1-215ENST00000520804 WIPI2Q9Y4P8 454 aa16.71■□□□□ 0.27
PABPC1-215ENST00000520804 CACNG2Q9Y698 323 aa16.71■□□□□ 0.27
PABPC1-215ENST00000520804 ELOVL7A1L3X0 281 aa16.7■□□□□ 0.26
PABPC1-215ENST00000520804 SPRY3O43610 288 aa16.7■□□□□ 0.26
PABPC1-215ENST00000520804 DEAF1O75398 565 aaPredicted RBP16.7■□□□□ 0.26
PABPC1-215ENST00000520804 MPZL1O95297 269 aa16.7■□□□□ 0.26
PABPC1-215ENST00000520804 IGHV1-46P01743 117 aa16.7■□□□□ 0.26
PABPC1-215ENST00000520804 CST2P09228 141 aa16.7■□□□□ 0.26
PABPC1-215ENST00000520804 MAKP20794 623 aa16.7■□□□□ 0.26
PABPC1-215ENST00000520804 FUT4P22083 530 aa16.7■□□□□ 0.26
PABPC1-215ENST00000520804 LAP3P28838 519 aa16.7■□□□□ 0.26
PABPC1-215ENST00000520804 MPV17P39210 176 aa16.7■□□□□ 0.26
PABPC1-215ENST00000520804 MBNL2Q5VZF2 373 aaKnown RBP16.7■□□□□ 0.26
PABPC1-215ENST00000520804 FAM205BPQ63HN1 556 aa16.7■□□□□ 0.26
PABPC1-215ENST00000520804 FOXL2NBQ6ZUU3 175 aa16.7■□□□□ 0.26
PABPC1-215ENST00000520804 RFPL4BQ6ZWI9 263 aa16.7■□□□□ 0.26
PABPC1-215ENST00000520804 IGFN1Q86VF2 1251 aa16.7■□□□□ 0.26
PABPC1-215ENST00000520804 C1orf174Q8IYL3 243 aa16.7■□□□□ 0.26
PABPC1-215ENST00000520804 ALDH16A1Q8IZ83 802 aa16.7■□□□□ 0.26
PABPC1-215ENST00000520804 SEMA6DQ8NFY4 1073 aa16.7■□□□□ 0.26
PABPC1-215ENST00000520804 KLF14Q8TD94 323 aaPredicted RBP16.7■□□□□ 0.26
PABPC1-215ENST00000520804 ZFAND2BQ8WV99 257 aa16.7■□□□□ 0.26
PABPC1-215ENST00000520804 ELMOD3Q96FG2 381 aa16.7■□□□□ 0.26
PABPC1-215ENST00000520804 OR2H1Q9GZK4 316 aa16.7■□□□□ 0.26
PABPC1-215ENST00000520804 OR2J1Q9GZK6 312 aa16.7■□□□□ 0.26
PABPC1-215ENST00000520804 WNT5BQ9H1J7 359 aa16.7■□□□□ 0.26
PABPC1-215ENST00000520804 PLSCR5A0PG75 271 aa16.69■□□□□ 0.26
PABPC1-215ENST00000520804 PLPP2O43688 288 aa16.69■□□□□ 0.26
PABPC1-215ENST00000520804 ICMTO60725 284 aa16.69■□□□□ 0.26
PABPC1-215ENST00000520804 YAP1P46937 504 aaKnown RBP16.69■□□□□ 0.26
PABPC1-215ENST00000520804 C1orf229Q6ZS94 237 aaPredicted RBP16.69■□□□□ 0.26
PABPC1-215ENST00000520804 NRMQ8IXM6 262 aa16.69■□□□□ 0.26
PABPC1-215ENST00000520804 OFCC1Q8IZS5 231 aa16.69■□□□□ 0.26
PABPC1-215ENST00000520804 TEX29Q8N6K0 151 aa16.69■□□□□ 0.26
PABPC1-215ENST00000520804 OR51A7Q8NH64 312 aa16.69■□□□□ 0.26
PABPC1-215ENST00000520804 LZICQ8WZA0 190 aa16.69■□□□□ 0.26
PABPC1-215ENST00000520804 RAB1CQ92928 201 aa16.69■□□□□ 0.26
PABPC1-215ENST00000520804 TIMD4Q96H15 378 aa16.69■□□□□ 0.26
PABPC1-215ENST00000520804 CYSLTR2Q9NS75 346 aa16.69■□□□□ 0.26
PABPC1-215ENST00000520804 MAN2C1Q9NTJ4 1040 aa16.69■□□□□ 0.26
PABPC1-215ENST00000520804 RHCGQ9UBD6 479 aa16.69■□□□□ 0.26
PABPC1-215ENST00000520804 TIMM10BQ9Y5J6 103 aa16.69■□□□□ 0.26
PABPC1-215ENST00000520804 TRAV27A0A087WT01 109 aa16.68■□□□□ 0.26
PABPC1-215ENST00000520804 A6NIZ1 184 aa16.68■□□□□ 0.26
PABPC1-215ENST00000520804 ZSCAN5BA6NJL1 495 aa16.68■□□□□ 0.26
PABPC1-215ENST00000520804 H3BSA7 217 aa16.68■□□□□ 0.26
PABPC1-215ENST00000520804 AVPP01185 164 aa16.68■□□□□ 0.26
PABPC1-215ENST00000520804 IGHV2-5P01817 119 aa16.68■□□□□ 0.26
PABPC1-215ENST00000520804 LIPAP38571 399 aa16.68■□□□□ 0.26
PABPC1-215ENST00000520804 GUCA1AP43080 201 aaPredicted RBP16.68■□□□□ 0.26
PABPC1-215ENST00000520804 RAP1BP61224 184 aa16.68■□□□□ 0.26
PABPC1-215ENST00000520804 PCBD1P61457 104 aa16.68■□□□□ 0.26
PABPC1-215ENST00000520804 PPP1CBP62140 327 aa16.68■□□□□ 0.26
PABPC1-215ENST00000520804 RAP1AP62834 184 aa16.68■□□□□ 0.26
PABPC1-215ENST00000520804 PRKCDQ05655 676 aa16.68■□□□□ 0.26
PABPC1-215ENST00000520804 FHL1Q13642 323 aa16.68■□□□□ 0.26
PABPC1-215ENST00000520804 TRAM2Q15035 370 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms