RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 IL22Q9GZX6 179 aa3.64□□□□□ -1.83
HMGB1P46-201ENST00000520062 LINC00597Q9H2U6 94 aa3.64□□□□□ -1.83
HMGB1P46-201ENST00000520062 TRAPPC4Q9Y296 219 aa3.64□□□□□ -1.83
HMGB1P46-201ENST00000520062 HEBP2Q9Y5Z4 205 aa3.64□□□□□ -1.83
HMGB1P46-201ENST00000520062 F11RQ9Y624 299 aaKnown RBP3.64□□□□□ -1.83
HMGB1P46-201ENST00000520062 KCNE3Q9Y6H6 103 aa3.64□□□□□ -1.83
HMGB1P46-201ENST00000520062 AGRNO00468 2067 aa3.64□□□□□ -1.83
HMGB1P46-201ENST00000520062 MROH7-TTC4A0A0A0MT08 1334 aa3.64□□□□□ -1.83
HMGB1P46-201ENST00000520062 MROH5Q6ZUA9 1318 aa3.64□□□□□ -1.83
HMGB1P46-201ENST00000520062 A0A1W2PRD5 423 aa3.63□□□□□ -1.83
HMGB1P46-201ENST00000520062 HIDE1A8MVS5 230 aa3.63□□□□□ -1.83
HMGB1P46-201ENST00000520062 ICOSLGO75144 302 aa3.63□□□□□ -1.83
HMGB1P46-201ENST00000520062 FKBP6O75344 327 aa3.63□□□□□ -1.83
HMGB1P46-201ENST00000520062 FCN3O75636 299 aa3.63□□□□□ -1.83
HMGB1P46-201ENST00000520062 AQP8O94778 261 aa3.63□□□□□ -1.83
HMGB1P46-201ENST00000520062 MGMTP16455 207 aa3.63□□□□□ -1.83
HMGB1P46-201ENST00000520062 ZNF19P17023 458 aa3.63□□□□□ -1.83
HMGB1P46-201ENST00000520062 MXD1Q05195 221 aa3.63□□□□□ -1.83
HMGB1P46-201ENST00000520062 REG3AQ06141 175 aa3.63□□□□□ -1.83
HMGB1P46-201ENST00000520062 SMARCB1Q12824 385 aa3.63□□□□□ -1.83
HMGB1P46-201ENST00000520062 PSMD5Q16401 504 aa3.63□□□□□ -1.83
HMGB1P46-201ENST00000520062 TTLL9Q3SXZ7 439 aa3.63□□□□□ -1.83
HMGB1P46-201ENST00000520062 TEX43Q6ZNM6 134 aa3.63□□□□□ -1.83
HMGB1P46-201ENST00000520062 ZNF621Q6ZSS3 439 aa3.63□□□□□ -1.83
HMGB1P46-201ENST00000520062 ZNF321PQ8N8H1 164 aa3.63□□□□□ -1.83
HMGB1P46-201ENST00000520062 OR52E5Q8NH55 327 aa3.63□□□□□ -1.83
HMGB1P46-201ENST00000520062 NUBPLQ8TB37 319 aa3.63□□□□□ -1.83
HMGB1P46-201ENST00000520062 BLOC1S5Q8TDH9 187 aa3.63□□□□□ -1.83
HMGB1P46-201ENST00000520062 CD300LFQ8TDQ1 290 aa3.63□□□□□ -1.83
HMGB1P46-201ENST00000520062 ELSPBP1Q96BH3 223 aa3.63□□□□□ -1.83
HMGB1P46-201ENST00000520062 C9orf72Q96LT7 481 aa3.63□□□□□ -1.83
HMGB1P46-201ENST00000520062 OR5B12Q96R08 314 aa3.63□□□□□ -1.83
HMGB1P46-201ENST00000520062 LZTS2Q9BRK4 669 aa3.63□□□□□ -1.83
HMGB1P46-201ENST00000520062 RGCCQ9H4X1 137 aa3.63□□□□□ -1.83
HMGB1P46-201ENST00000520062 PDFQ9HBH1 243 aa3.63□□□□□ -1.83
HMGB1P46-201ENST00000520062 PXMP2Q9NR77 195 aa3.63□□□□□ -1.83
HMGB1P46-201ENST00000520062 MYEF2Q9P2K5 600 aaKnown RBP3.63□□□□□ -1.83
HMGB1P46-201ENST00000520062 ZNF629Q9UEG4 869 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P46-201ENST00000520062 PCYOX1Q9UHG3 505 aa3.63□□□□□ -1.83
HMGB1P46-201ENST00000520062 TP53TG5Q9Y2B4 290 aa3.63□□□□□ -1.83
HMGB1P46-201ENST00000520062 PRSS37A4D1T9 235 aa3.62□□□□□ -1.83
HMGB1P46-201ENST00000520062 TRIM49D1C9J1S8 452 aa3.62□□□□□ -1.83
HMGB1P46-201ENST00000520062 H0YHG0 523 aa3.62□□□□□ -1.83
HMGB1P46-201ENST00000520062 SMKR1H3BMG3 65 aa3.62□□□□□ -1.83
HMGB1P46-201ENST00000520062 RAB3DO95716 219 aa3.62□□□□□ -1.83
HMGB1P46-201ENST00000520062 CD160O95971 181 aa3.62□□□□□ -1.83
HMGB1P46-201ENST00000520062 OTCP00480 354 aa3.62□□□□□ -1.83
HMGB1P46-201ENST00000520062 ZNF30P17039 623 aa3.62□□□□□ -1.83
HMGB1P46-201ENST00000520062 CTRB1P17538 263 aa3.62□□□□□ -1.83
HMGB1P46-201ENST00000520062 RCC1P18754 421 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P46-201ENST00000520062 CCNE1P24864 410 aa3.62□□□□□ -1.83
HMGB1P46-201ENST00000520062 F2RP25116 425 aa3.62□□□□□ -1.83
HMGB1P46-201ENST00000520062 NCBP2P52298 156 aaKnown RBP eCLIP3.62□□□□□ -1.83
HMGB1P46-201ENST00000520062 PON3Q15166 354 aa3.62□□□□□ -1.83
HMGB1P46-201ENST00000520062 ZNF726P1Q15940 193 aa3.62□□□□□ -1.83
HMGB1P46-201ENST00000520062 NKAIN1Q4KMZ8 207 aa3.62□□□□□ -1.83
HMGB1P46-201ENST00000520062 UBE2UQ5VVX9 321 aa3.62□□□□□ -1.83
HMGB1P46-201ENST00000520062 SPECC1LQ69YQ0 1117 aa3.62□□□□□ -1.83
HMGB1P46-201ENST00000520062 H3F3CQ6NXT2 135 aa3.62□□□□□ -1.83
HMGB1P46-201ENST00000520062 LINC00173Q6ZV60 143 aa3.62□□□□□ -1.83
HMGB1P46-201ENST00000520062 ABHD13Q7L211 337 aa3.62□□□□□ -1.83
HMGB1P46-201ENST00000520062 OAFQ86UD1 273 aa3.62□□□□□ -1.83
HMGB1P46-201ENST00000520062 OR4S2Q8NH73 311 aa3.62□□□□□ -1.83
HMGB1P46-201ENST00000520062 ACTRT1Q8TDG2 376 aa3.62□□□□□ -1.83
HMGB1P46-201ENST00000520062 ZNF75CPQ92670 426 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P46-201ENST00000520062 FAM3DQ96BQ1 224 aa3.62□□□□□ -1.83
HMGB1P46-201ENST00000520062 ECHDC3Q96DC8 303 aa3.62□□□□□ -1.83
HMGB1P46-201ENST00000520062 ASB9Q96DX5 294 aa3.62□□□□□ -1.83
HMGB1P46-201ENST00000520062 SEH1LQ96EE3 360 aa3.62□□□□□ -1.83
HMGB1P46-201ENST00000520062 FAM210BQ96KR6 192 aa3.62□□□□□ -1.83
HMGB1P46-201ENST00000520062 C8orf33Q9H7E9 229 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P46-201ENST00000520062 CYP3A43Q9HB55 503 aa3.62□□□□□ -1.83
HMGB1P46-201ENST00000520062 RETNQ9HD89 108 aa3.62□□□□□ -1.83
HMGB1P46-201ENST00000520062 KCNJ16Q9NPI9 418 aa3.62□□□□□ -1.83
HMGB1P46-201ENST00000520062 STOX2Q9P2F5 926 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P46-201ENST00000520062 WDR62O43379 1518 aa3.61□□□□□ -1.83
HMGB1P46-201ENST00000520062 NKX2-6A6NCS4 301 aa3.61□□□□□ -1.83
HMGB1P46-201ENST00000520062 NUPL2O15504 423 aaKnown RBP3.61□□□□□ -1.83
HMGB1P46-201ENST00000520062 ZNF17P17021 662 aa3.61□□□□□ -1.83
HMGB1P46-201ENST00000520062 SRMP19623 302 aa3.61□□□□□ -1.83
HMGB1P46-201ENST00000520062 OMGP23515 440 aa3.61□□□□□ -1.83
HMGB1P46-201ENST00000520062 CD82P27701 267 aa3.61□□□□□ -1.83
HMGB1P46-201ENST00000520062 OR1E1P30953 314 aa3.61□□□□□ -1.83
HMGB1P46-201ENST00000520062 SLC1A2P43004 574 aa3.61□□□□□ -1.83
HMGB1P46-201ENST00000520062 HMGCS1Q01581 520 aa3.61□□□□□ -1.83
HMGB1P46-201ENST00000520062 TCP10Q12799 353 aa3.61□□□□□ -1.83
HMGB1P46-201ENST00000520062 UNC119Q13432 240 aa3.61□□□□□ -1.83
HMGB1P46-201ENST00000520062 MBOAT1Q6ZNC8 495 aa3.61□□□□□ -1.83
HMGB1P46-201ENST00000520062 C6orf120Q7Z4R8 191 aa3.61□□□□□ -1.83
HMGB1P46-201ENST00000520062 VTCN1Q7Z7D3 282 aa3.61□□□□□ -1.83
HMGB1P46-201ENST00000520062 LINC00523Q86TU6 105 aa3.61□□□□□ -1.83
HMGB1P46-201ENST00000520062 OR56A4Q8NGH8 313 aa3.61□□□□□ -1.83
HMGB1P46-201ENST00000520062 OR10J6PQ8NGY7 276 aa3.61□□□□□ -1.83
HMGB1P46-201ENST00000520062 RDH5Q92781 318 aa3.61□□□□□ -1.83
HMGB1P46-201ENST00000520062 SLC7A5P2Q9GIP4 190 aa3.61□□□□□ -1.83
HMGB1P46-201ENST00000520062 SLCO1B3Q9NPD5 702 aa3.61□□□□□ -1.83
HMGB1P46-201ENST00000520062 CLN6Q9NWW5 311 aa3.61□□□□□ -1.83
HMGB1P46-201ENST00000520062 ARPC4-TTLL3A0A0A6YYG9 625 aa3.6□□□□□ -1.83
HMGB1P46-201ENST00000520062 A0A1B0GUA9 196 aa3.6□□□□□ -1.83
HMGB1P46-201ENST00000520062 TMEM120BA0PK00 339 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms