RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 EMC6Q9BV81 110 aa5.32□□□□□ -1.56
CTNNA1-216ENST00000519489 PTDSS2Q9BVG9 487 aa5.32□□□□□ -1.56
CTNNA1-216ENST00000519489 HOXD1Q9GZZ0 328 aa5.32□□□□□ -1.56
CTNNA1-216ENST00000519489 PIGUQ9H490 435 aa5.32□□□□□ -1.56
CTNNA1-216ENST00000519489 POPDC3Q9HBV1 291 aa5.32□□□□□ -1.56
CTNNA1-216ENST00000519489 TRIM36Q9NQ86 728 aa5.32□□□□□ -1.56
CTNNA1-216ENST00000519489 CYSLTR2Q9NS75 346 aa5.32□□□□□ -1.56
CTNNA1-216ENST00000519489 IL19Q9UHD0 177 aa5.32□□□□□ -1.56
CTNNA1-216ENST00000519489 GLS2Q9UI32 602 aa5.32□□□□□ -1.56
CTNNA1-216ENST00000519489 PCDHGB4Q9UN71 923 aa5.32□□□□□ -1.56
CTNNA1-216ENST00000519489 ANGPTL3Q9Y5C1 460 aa5.32□□□□□ -1.56
CTNNA1-216ENST00000519489 GNG14A0A1W2PPG7 69 aa5.31□□□□□ -1.56
CTNNA1-216ENST00000519489 NUDT19A8MXV4 375 aa5.31□□□□□ -1.56
CTNNA1-216ENST00000519489 FTCDNL1E5RQL4 147 aa5.31□□□□□ -1.56
CTNNA1-216ENST00000519489 SLC22A3O75751 556 aa5.31□□□□□ -1.56
CTNNA1-216ENST00000519489 HPRP00739 348 aa5.31□□□□□ -1.56
CTNNA1-216ENST00000519489 HMGN2P05204 90 aaKnown RBP5.31□□□□□ -1.56
CTNNA1-216ENST00000519489 GPIP06744 558 aa5.31□□□□□ -1.56
CTNNA1-216ENST00000519489 PNMTP11086 282 aa5.31□□□□□ -1.56
CTNNA1-216ENST00000519489 HLA-DOBP13765 273 aa5.31□□□□□ -1.56
CTNNA1-216ENST00000519489 SPNP16150 400 aa5.31□□□□□ -1.56
CTNNA1-216ENST00000519489 TNFRSF1AP19438 455 aa5.31□□□□□ -1.56
CTNNA1-216ENST00000519489 ATP6V1C1P21283 382 aa5.31□□□□□ -1.56
CTNNA1-216ENST00000519489 UBE2E1P51965 193 aa5.31□□□□□ -1.56
CTNNA1-216ENST00000519489 RAB25P57735 213 aa5.31□□□□□ -1.56
CTNNA1-216ENST00000519489 LASP1Q14847 261 aaKnown RBP5.31□□□□□ -1.56
CTNNA1-216ENST00000519489 AANATQ16613 207 aa5.31□□□□□ -1.56
CTNNA1-216ENST00000519489 TTC19Q6DKK2 380 aaPredicted RBP5.31□□□□□ -1.56
CTNNA1-216ENST00000519489 C4orf22Q6V702 233 aa5.31□□□□□ -1.56
CTNNA1-216ENST00000519489 MOGAT3Q86VF5 341 aa5.31□□□□□ -1.56
CTNNA1-216ENST00000519489 OR4F6Q8NGB9 312 aa5.31□□□□□ -1.56
CTNNA1-216ENST00000519489 ZNF563Q8TA94 476 aa5.31□□□□□ -1.56
CTNNA1-216ENST00000519489 DDIT4LQ96D03 193 aa5.31□□□□□ -1.56
CTNNA1-216ENST00000519489 TXNDC15Q96J42 360 aa5.31□□□□□ -1.56
CTNNA1-216ENST00000519489 ACTRT3Q9BYD9 372 aa5.31□□□□□ -1.56
CTNNA1-216ENST00000519489 ACPTQ9BZG2 426 aa5.31□□□□□ -1.56
CTNNA1-216ENST00000519489 DUSP22Q9NRW4 184 aa5.31□□□□□ -1.56
CTNNA1-216ENST00000519489 ABHD10Q9NUJ1 306 aa5.31□□□□□ -1.56
CTNNA1-216ENST00000519489 ONECUT1Q9UBC0 465 aa5.31□□□□□ -1.56
CTNNA1-216ENST00000519489 VPS29Q9UBQ0 182 aa5.31□□□□□ -1.56
CTNNA1-216ENST00000519489 TCF19Q9Y242 345 aa5.31□□□□□ -1.56
CTNNA1-216ENST00000519489 RASD1Q9Y272 281 aa5.31□□□□□ -1.56
CTNNA1-216ENST00000519489 POFUT2Q9Y2G5 429 aa5.31□□□□□ -1.56
CTNNA1-216ENST00000519489 REXO2Q9Y3B8 237 aaKnown RBP5.31□□□□□ -1.56
CTNNA1-216ENST00000519489 LRP2P98164 4655 aa5.3□□□□□ -1.56
CTNNA1-216ENST00000519489 PRSS29PA6NIE9 313 aa5.3□□□□□ -1.56
CTNNA1-216ENST00000519489 SH2D7A6NKC9 451 aaPredicted RBP5.3□□□□□ -1.56
CTNNA1-216ENST00000519489 F2RL2O00254 374 aa5.3□□□□□ -1.56
CTNNA1-216ENST00000519489 FBP2O00757 339 aa5.3□□□□□ -1.56
CTNNA1-216ENST00000519489 RAD51CO43502 376 aa5.3□□□□□ -1.56
CTNNA1-216ENST00000519489 SCN2BO60939 215 aa5.3□□□□□ -1.56
CTNNA1-216ENST00000519489 NPIPB7O75200 414 aa5.3□□□□□ -1.56
CTNNA1-216ENST00000519489 VAMP5O95183 116 aa5.3□□□□□ -1.56
CTNNA1-216ENST00000519489 HSPA4LO95757 839 aa5.3□□□□□ -1.56
CTNNA1-216ENST00000519489 MMP7P09237 267 aaPredicted RBP5.3□□□□□ -1.56
CTNNA1-216ENST00000519489 INAFM2P0DMQ5 153 aa5.3□□□□□ -1.56
CTNNA1-216ENST00000519489 EEF1B2P24534 225 aaKnown RBP5.3□□□□□ -1.56
CTNNA1-216ENST00000519489 FKBP2P26885 142 aaKnown RBP5.3□□□□□ -1.56
CTNNA1-216ENST00000519489 NTSP30990 170 aa5.3□□□□□ -1.56
CTNNA1-216ENST00000519489 CEBPDP49716 269 aaPredicted RBP5.3□□□□□ -1.56
CTNNA1-216ENST00000519489 NPY4RP50391 375 aa5.3□□□□□ -1.56
CTNNA1-216ENST00000519489 HTR6P50406 440 aa5.3□□□□□ -1.56
CTNNA1-216ENST00000519489 PMS2P11Q13670 270 aa5.3□□□□□ -1.56
CTNNA1-216ENST00000519489 KRT72Q14CN4 511 aa5.3□□□□□ -1.56
CTNNA1-216ENST00000519489 ZKSCAN8Q15776 578 aaPredicted RBP5.3□□□□□ -1.56
CTNNA1-216ENST00000519489 STX1AQ16623 288 aa5.3□□□□□ -1.56
CTNNA1-216ENST00000519489 DEFB136Q30KP8 78 aa5.3□□□□□ -1.56
CTNNA1-216ENST00000519489 ZNF260Q3ZCT1 412 aa5.3□□□□□ -1.56
CTNNA1-216ENST00000519489 LDLRAD2Q5SZI1 272 aa5.3□□□□□ -1.56
CTNNA1-216ENST00000519489 RNLSQ5VYX0 342 aa5.3□□□□□ -1.56
CTNNA1-216ENST00000519489 TMEM65Q6PI78 240 aa5.3□□□□□ -1.56
CTNNA1-216ENST00000519489 SZRD1Q7Z422 152 aa5.3□□□□□ -1.56
CTNNA1-216ENST00000519489 SLC22A24Q8N4F4 322 aa5.3□□□□□ -1.56
CTNNA1-216ENST00000519489 PIK3C3Q8NEB9 887 aa5.3□□□□□ -1.56
CTNNA1-216ENST00000519489 OR10AD1Q8NGE0 317 aa5.3□□□□□ -1.56
CTNNA1-216ENST00000519489 OR51D1Q8NGF3 324 aa5.3□□□□□ -1.56
CTNNA1-216ENST00000519489 CDC26Q8NHZ8 85 aa5.3□□□□□ -1.56
CTNNA1-216ENST00000519489 VANGL1Q8TAA9 524 aaPredicted RBP5.3□□□□□ -1.56
CTNNA1-216ENST00000519489 STAG3L4Q8TBR4 150 aa5.3□□□□□ -1.56
CTNNA1-216ENST00000519489 SELENOMQ8WWX9 145 aa5.3□□□□□ -1.56
CTNNA1-216ENST00000519489 CNOT9Q92600 299 aaKnown RBP5.3□□□□□ -1.56
CTNNA1-216ENST00000519489 FAM120BQ96EK7 910 aaKnown RBP5.3□□□□□ -1.56
CTNNA1-216ENST00000519489 HES6Q96HZ4 224 aa5.3□□□□□ -1.56
CTNNA1-216ENST00000519489 EGLN2Q96KS0 407 aa5.3□□□□□ -1.56
CTNNA1-216ENST00000519489 POM121L2Q96KW2 1035 aa5.3□□□□□ -1.56
CTNNA1-216ENST00000519489 STACQ99469 402 aa5.3□□□□□ -1.56
CTNNA1-216ENST00000519489 SDF2Q99470 211 aa5.3□□□□□ -1.56
CTNNA1-216ENST00000519489 NAT10Q9H0A0 1025 aaKnown RBP5.3□□□□□ -1.56
CTNNA1-216ENST00000519489 FAM234AQ9H0X4 552 aa5.3□□□□□ -1.56
CTNNA1-216ENST00000519489 BRF2Q9HAW0 419 aa5.3□□□□□ -1.56
CTNNA1-216ENST00000519489 NANSQ9NR45 359 aa5.3□□□□□ -1.56
CTNNA1-216ENST00000519489 ERVK13-1Q9NX77 482 aa5.3□□□□□ -1.56
CTNNA1-216ENST00000519489 CAPN7Q9Y6W3 813 aa5.3□□□□□ -1.56
CTNNA1-216ENST00000519489 G3V2L1 256 aa5.29□□□□□ -1.56
CTNNA1-216ENST00000519489 MS4A18H0YCH9 400 aa5.29□□□□□ -1.56
CTNNA1-216ENST00000519489 CCL24O00175 119 aa5.29□□□□□ -1.56
CTNNA1-216ENST00000519489 DVL1O14640 695 aa5.29□□□□□ -1.56
CTNNA1-216ENST00000519489 TP73O15350 636 aa5.29□□□□□ -1.56
CTNNA1-216ENST00000519489 TIMM8AO60220 97 aaPredicted RBP5.29□□□□□ -1.56
CTNNA1-216ENST00000519489 OTCP00480 354 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms