RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 SMAD9O15198 467 aaKnown RBP20.78■□□□□ 0.92
SLIT3-204ENST00000518140 IL1AP01583 271 aa20.78■□□□□ 0.92
SLIT3-204ENST00000518140 CLRN1P58418 232 aa20.78■□□□□ 0.92
SLIT3-204ENST00000518140 NHLH1Q02575 133 aa20.78■□□□□ 0.92
SLIT3-204ENST00000518140 HBMQ6B0K9 141 aa20.78■□□□□ 0.92
SLIT3-204ENST00000518140 RPL22L1Q6P5R6 122 aaKnown RBP20.78■□□□□ 0.92
SLIT3-204ENST00000518140 CREB3L2Q70SY1 520 aa20.78■□□□□ 0.92
SLIT3-204ENST00000518140 TMEM251Q8N6I4 163 aa20.78■□□□□ 0.92
SLIT3-204ENST00000518140 FDCSPQ8NFU4 85 aa20.78■□□□□ 0.92
SLIT3-204ENST00000518140 SLC25A46Q96AG3 418 aa20.78■□□□□ 0.92
SLIT3-204ENST00000518140 SMIM19Q96E16 107 aa20.78■□□□□ 0.92
SLIT3-204ENST00000518140 RBP7Q96R05 134 aa20.78■□□□□ 0.92
SLIT3-204ENST00000518140 CXCL13O43927 109 aa20.77■□□□□ 0.92
SLIT3-204ENST00000518140 KHDRBS3O75525 346 aaKnown RBP20.77■□□□□ 0.92
SLIT3-204ENST00000518140 IGHG1P01857 330 aa20.77■□□□□ 0.92
SLIT3-204ENST00000518140 GAAP10253 952 aa20.77■□□□□ 0.92
SLIT3-204ENST00000518140 POU3F2P20265 443 aaPredicted RBP20.77■□□□□ 0.92
SLIT3-204ENST00000518140 CAPZA2P47755 286 aa20.77■□□□□ 0.92
SLIT3-204ENST00000518140 MEOX1P50221 254 aa20.77■□□□□ 0.92
SLIT3-204ENST00000518140 RAC3P60763 192 aa20.77■□□□□ 0.92
SLIT3-204ENST00000518140 NOXO1Q8NFA2 376 aa20.77■□□□□ 0.92
SLIT3-204ENST00000518140 IL17RDQ8NFM7 739 aa20.77■□□□□ 0.92
SLIT3-204ENST00000518140 NEIL3Q8TAT5 605 aa20.77■□□□□ 0.92
SLIT3-204ENST00000518140 MRPL48Q96GC5 212 aaKnown RBP20.77■□□□□ 0.92
SLIT3-204ENST00000518140 COQ7Q99807 217 aa20.77■□□□□ 0.92
SLIT3-204ENST00000518140 NAA11Q9BSU3 229 aaPredicted RBP20.77■□□□□ 0.92
SLIT3-204ENST00000518140 MFRPQ9BY79 579 aa20.77■□□□□ 0.92
SLIT3-204ENST00000518140 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.77■□□□□ 0.92
SLIT3-204ENST00000518140 SIAEQ9HAT2 523 aa20.77■□□□□ 0.92
SLIT3-204ENST00000518140 MOV10Q9HCE1 1003 aaKnown RBP20.77■□□□□ 0.92
SLIT3-204ENST00000518140 SMURF1Q9HCE7 757 aa20.77■□□□□ 0.92
SLIT3-204ENST00000518140 CDV3Q9UKY7 258 aaKnown RBP20.77■□□□□ 0.92
SLIT3-204ENST00000518140 EFSO43281 561 aa20.77■□□□□ 0.92
SLIT3-204ENST00000518140 NCR1O76036 304 aa20.77■□□□□ 0.92
SLIT3-204ENST00000518140 HPNP05981 417 aa20.77■□□□□ 0.92
SLIT3-204ENST00000518140 CD53P19397 219 aa20.77■□□□□ 0.92
SLIT3-204ENST00000518140 TNFSF8P32971 234 aa20.77■□□□□ 0.92
SLIT3-204ENST00000518140 RORCP51449 518 aa20.77■□□□□ 0.92
SLIT3-204ENST00000518140 BLVRAP53004 296 aa20.77■□□□□ 0.92
SLIT3-204ENST00000518140 RPS11P62280 158 aaKnown RBP eCLIP20.77■□□□□ 0.92
SLIT3-204ENST00000518140 HNRNPA0Q13151 305 aaKnown RBP20.77■□□□□ 0.92
SLIT3-204ENST00000518140 SLC17A1Q14916 467 aa20.77■□□□□ 0.92
SLIT3-204ENST00000518140 LRFN4Q6PJG9 635 aa20.77■□□□□ 0.92
SLIT3-204ENST00000518140 DNM1P34Q6PK57 102 aa20.77■□□□□ 0.92
SLIT3-204ENST00000518140 LRRN1Q6UXK5 716 aa20.77■□□□□ 0.92
SLIT3-204ENST00000518140 CEACAM19Q7Z692 300 aa20.77■□□□□ 0.92
SLIT3-204ENST00000518140 PNPLA5Q7Z6Z6 429 aaPredicted RBP20.77■□□□□ 0.92
SLIT3-204ENST00000518140 ZIC4Q8N9L1 334 aa20.77■□□□□ 0.92
SLIT3-204ENST00000518140 OR9K2Q8NGE7 335 aa20.77■□□□□ 0.92
SLIT3-204ENST00000518140 OR10D3Q8NH80 312 aa20.77■□□□□ 0.92
SLIT3-204ENST00000518140 ROBO4Q8WZ75 1007 aa20.77■□□□□ 0.92
SLIT3-204ENST00000518140 HAS2Q92819 552 aa20.77■□□□□ 0.92
SLIT3-204ENST00000518140 TMEM14AQ9Y6G1 99 aa20.77■□□□□ 0.92
SLIT3-204ENST00000518140 ZNF726A6NNF4 738 aa20.76■□□□□ 0.91
SLIT3-204ENST00000518140 SC5DO75845 299 aa20.76■□□□□ 0.91
SLIT3-204ENST00000518140 KRT8P05787 483 aa20.76■□□□□ 0.91
SLIT3-204ENST00000518140 EIF1AXP47813 144 aaKnown RBP20.76■□□□□ 0.91
SLIT3-204ENST00000518140 ARG2P78540 354 aa20.76■□□□□ 0.91
SLIT3-204ENST00000518140 ACSM3Q53FZ2 586 aa20.76■□□□□ 0.91
SLIT3-204ENST00000518140 CCDC92Q53HC0 331 aaPredicted RBP20.76■□□□□ 0.91
SLIT3-204ENST00000518140 THEM4Q5T1C6 240 aa20.76■□□□□ 0.91
SLIT3-204ENST00000518140 LINC00346Q8IVM7 164 aa20.76■□□□□ 0.91
SLIT3-204ENST00000518140 MNTQ99583 582 aa20.76■□□□□ 0.91
SLIT3-204ENST00000518140 MED18Q9BUE0 208 aa20.76■□□□□ 0.91
SLIT3-204ENST00000518140 SLC6A15Q9H2J7 730 aa20.76■□□□□ 0.91
SLIT3-204ENST00000518140 PLEKHB1Q9UF11 243 aaPredicted RBP20.76■□□□□ 0.91
SLIT3-204ENST00000518140 A0A1W2PPK0 400 aa20.76■□□□□ 0.91
SLIT3-204ENST00000518140 GLSO94925 669 aaPredicted RBP20.76■□□□□ 0.91
SLIT3-204ENST00000518140 SPINK2P20155 84 aa20.76■□□□□ 0.91
SLIT3-204ENST00000518140 GALP22466 123 aa20.76■□□□□ 0.91
SLIT3-204ENST00000518140 CDAP32320 146 aa20.76■□□□□ 0.91
SLIT3-204ENST00000518140 PLGLB1Q02325 96 aa20.76■□□□□ 0.91
SLIT3-204ENST00000518140 EGR3Q06889 387 aa20.76■□□□□ 0.91
SLIT3-204ENST00000518140 HIST3H3Q16695 136 aa20.76■□□□□ 0.91
SLIT3-204ENST00000518140 DEFB109BQ30KR1 87 aa20.76■□□□□ 0.91
SLIT3-204ENST00000518140 CCDC58Q4VC31 144 aa20.76■□□□□ 0.91
SLIT3-204ENST00000518140 CORO6Q6QEF8 472 aa20.76■□□□□ 0.91
SLIT3-204ENST00000518140 ESPNLQ6ZVH7 1005 aa20.76■□□□□ 0.91
SLIT3-204ENST00000518140 KCTD20Q7Z5Y7 419 aa20.76■□□□□ 0.91
SLIT3-204ENST00000518140 OR2V1Q8NHB1 315 aa20.76■□□□□ 0.91
SLIT3-204ENST00000518140 C11orf40Q8WZ69 217 aa20.76■□□□□ 0.91
SLIT3-204ENST00000518140 MCHR2Q969V1 340 aa20.76■□□□□ 0.91
SLIT3-204ENST00000518140 ZNF845Q96IR2 970 aaPredicted RBP20.76■□□□□ 0.91
SLIT3-204ENST00000518140 MAP6Q96JE9 813 aa20.76■□□□□ 0.91
SLIT3-204ENST00000518140 ABHD6Q9BV23 337 aa20.76■□□□□ 0.91
SLIT3-204ENST00000518140 ELOVL3Q9HB03 270 aa20.76■□□□□ 0.91
SLIT3-204ENST00000518140 NPAP1Q9NZP6 1156 aa20.76■□□□□ 0.91
SLIT3-204ENST00000518140 FRRS1LQ9P0K9 344 aa20.76■□□□□ 0.91
SLIT3-204ENST00000518140 KLF13Q9Y2Y9 288 aaPredicted RBP20.76■□□□□ 0.91
SLIT3-204ENST00000518140 CENPBD1B2RD01 187 aa20.75■□□□□ 0.91
SLIT3-204ENST00000518140 CASKO14936 926 aa20.75■□□□□ 0.91
SLIT3-204ENST00000518140 ITGB2P05107 769 aa20.75■□□□□ 0.91
SLIT3-204ENST00000518140 TACSTD2P09758 323 aa20.75■□□□□ 0.91
SLIT3-204ENST00000518140 MAGEB1P43366 347 aa20.75■□□□□ 0.91
SLIT3-204ENST00000518140 EIF2B1Q14232 305 aaKnown RBP20.75■□□□□ 0.91
SLIT3-204ENST00000518140 PHYHD1Q5SRE7 291 aa20.75■□□□□ 0.91
SLIT3-204ENST00000518140 SLC18B1Q6NT16 456 aa20.75■□□□□ 0.91
SLIT3-204ENST00000518140 GLB1L2Q8IW92 636 aa20.75■□□□□ 0.91
SLIT3-204ENST00000518140 CELF2-AS1Q8N7Q2 184 aa20.75■□□□□ 0.91
SLIT3-204ENST00000518140 SETD6Q8TBK2 473 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms