RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 CTLA4P16410 223 aa9.88□□□□□ -0.83
VCAN-212ENST00000515397 ITGA2P17301 1181 aa9.88□□□□□ -0.83
VCAN-212ENST00000515397 GLRXP35754 106 aa9.88□□□□□ -0.83
VCAN-212ENST00000515397 CDKN2AP42771 156 aaKnown RBP9.88□□□□□ -0.83
VCAN-212ENST00000515397 MNAT1P51948 309 aa9.88□□□□□ -0.83
VCAN-212ENST00000515397 RAP1BP61224 184 aa9.88□□□□□ -0.83
VCAN-212ENST00000515397 RAP1AP62834 184 aa9.88□□□□□ -0.83
VCAN-212ENST00000515397 PLP2Q04941 152 aa9.88□□□□□ -0.83
VCAN-212ENST00000515397 ENDOGQ14249 297 aaKnown RBP9.88□□□□□ -0.83
VCAN-212ENST00000515397 GGTLC2Q14390 218 aa9.88□□□□□ -0.83
VCAN-212ENST00000515397 TAF11Q15544 211 aa9.88□□□□□ -0.83
VCAN-212ENST00000515397 SPATA46Q5T0L3 261 aa9.88□□□□□ -0.83
VCAN-212ENST00000515397 PTCHD4Q6ZW05 846 aa9.88□□□□□ -0.83
VCAN-212ENST00000515397 FAM122BQ7Z309 247 aa9.88□□□□□ -0.83
VCAN-212ENST00000515397 GTF3AQ92664 365 aaKnown RBP9.88□□□□□ -0.83
VCAN-212ENST00000515397 MRPL24Q96A35 216 aaKnown RBP9.88□□□□□ -0.83
VCAN-212ENST00000515397 ZNF570Q96NI8 536 aa9.88□□□□□ -0.83
VCAN-212ENST00000515397 ZNF416Q9BWM5 594 aa9.88□□□□□ -0.83
VCAN-212ENST00000515397 KCNN2Q9H2S1 579 aa9.88□□□□□ -0.83
VCAN-212ENST00000515397 IL1RAPQ9NPH3 570 aa9.88□□□□□ -0.83
VCAN-212ENST00000515397 YAE1D1Q9NRH1 226 aa9.88□□□□□ -0.83
VCAN-212ENST00000515397 TAS2R1Q9NYW7 299 aa9.88□□□□□ -0.83
VCAN-212ENST00000515397 STX18Q9P2W9 335 aaKnown RBP9.88□□□□□ -0.83
VCAN-212ENST00000515397 REV1Q9UBZ9 1251 aa9.88□□□□□ -0.83
VCAN-212ENST00000515397 SPEF1Q9Y4P9 236 aa9.88□□□□□ -0.83
VCAN-212ENST00000515397 TCRBV5S2A0A599 114 aa9.87□□□□□ -0.83
VCAN-212ENST00000515397 PRSS37A4D1T9 235 aa9.87□□□□□ -0.83
VCAN-212ENST00000515397 XKRYO14609 159 aa9.87□□□□□ -0.83
VCAN-212ENST00000515397 SLC16A7O60669 478 aa9.87□□□□□ -0.83
VCAN-212ENST00000515397 DAOP14920 347 aa9.87□□□□□ -0.83
VCAN-212ENST00000515397 STOMP27105 288 aa9.87□□□□□ -0.83
VCAN-212ENST00000515397 APLNRP35414 380 aa9.87□□□□□ -0.83
VCAN-212ENST00000515397 WNT5AP41221 380 aa9.87□□□□□ -0.83
VCAN-212ENST00000515397 CENPAP49450 140 aa9.87□□□□□ -0.83
VCAN-212ENST00000515397 PDLIM4P50479 330 aa9.87□□□□□ -0.83
VCAN-212ENST00000515397 UCP2P55851 309 aa9.87□□□□□ -0.83
VCAN-212ENST00000515397 GLO1Q04760 184 aa9.87□□□□□ -0.83
VCAN-212ENST00000515397 KRR1Q13601 381 aaKnown RBP9.87□□□□□ -0.83
VCAN-212ENST00000515397 TBC1D28Q2M2D7 210 aa9.87□□□□□ -0.83
VCAN-212ENST00000515397 FAM27BQ5VT28 67 aa9.87□□□□□ -0.83
VCAN-212ENST00000515397 ZNF101Q8IZC7 436 aa9.87□□□□□ -0.83
VCAN-212ENST00000515397 OR9Q2Q8NGE9 314 aa9.87□□□□□ -0.83
VCAN-212ENST00000515397 CCDC124Q96CT7 223 aaKnown RBP9.87□□□□□ -0.83
VCAN-212ENST00000515397 SAMD8Q96LT4 415 aa9.87□□□□□ -0.83
VCAN-212ENST00000515397 ERMAPQ96PL5 475 aaPredicted RBP9.87□□□□□ -0.83
VCAN-212ENST00000515397 THTPAQ9BU02 230 aa9.87□□□□□ -0.83
VCAN-212ENST00000515397 OR2H1Q9GZK4 316 aa9.87□□□□□ -0.83
VCAN-212ENST00000515397 NUAK2Q9H093 628 aa9.87□□□□□ -0.83
VCAN-212ENST00000515397 RAB1BQ9H0U4 201 aa9.87□□□□□ -0.83
VCAN-212ENST00000515397 SYT4Q9H2B2 425 aa9.87□□□□□ -0.83
VCAN-212ENST00000515397 SMURF2Q9HAU4 748 aa9.87□□□□□ -0.83
VCAN-212ENST00000515397 SRA1Q9HD15 236 aaKnown RBP9.87□□□□□ -0.83
VCAN-212ENST00000515397 NRIP3Q9NQ35 241 aa9.87□□□□□ -0.83
VCAN-212ENST00000515397 NDE1Q9NXR1 346 aa9.87□□□□□ -0.83
VCAN-212ENST00000515397 VNN3Q9NY84 501 aa9.87□□□□□ -0.83
VCAN-212ENST00000515397 TAAR3PQ9P1P4 343 aa9.87□□□□□ -0.83
VCAN-212ENST00000515397 ACTR3BQ9P1U1 418 aa9.87□□□□□ -0.83
VCAN-212ENST00000515397 COA3Q9Y2R0 106 aaPredicted RBP9.87□□□□□ -0.83
VCAN-212ENST00000515397 IGHV4-61A0A0C4DH41 118 aa9.86□□□□□ -0.83
VCAN-212ENST00000515397 A0A1W2PPW3 197 aa9.86□□□□□ -0.83
VCAN-212ENST00000515397 LRP5LA4QPB2 252 aa9.86□□□□□ -0.83
VCAN-212ENST00000515397 TNFRSF11BO00300 401 aa9.86□□□□□ -0.83
VCAN-212ENST00000515397 DCTN6O00399 190 aa9.86□□□□□ -0.83
VCAN-212ENST00000515397 SYNGR3O43761 229 aa9.86□□□□□ -0.83
VCAN-212ENST00000515397 ENTPD5O75356 428 aa9.86□□□□□ -0.83
VCAN-212ENST00000515397 NGFP01138 241 aa9.86□□□□□ -0.83
VCAN-212ENST00000515397 HPXP02790 462 aa9.86□□□□□ -0.83
VCAN-212ENST00000515397 TP53P04637 393 aaPredicted RBP9.86□□□□□ -0.83
VCAN-212ENST00000515397 CALB2P22676 271 aa9.86□□□□□ -0.83
VCAN-212ENST00000515397 COL8A2P25067 703 aa9.86□□□□□ -0.83
VCAN-212ENST00000515397 RBMXP38159 391 aaKnown RBP9.86□□□□□ -0.83
VCAN-212ENST00000515397 GUCA1AP43080 201 aaPredicted RBP9.86□□□□□ -0.83
VCAN-212ENST00000515397 PPOXP50336 477 aa9.86□□□□□ -0.83
VCAN-212ENST00000515397 ERFP50548 548 aa9.86□□□□□ -0.83
VCAN-212ENST00000515397 SMIM11AP58511 58 aa9.86□□□□□ -0.83
VCAN-212ENST00000515397 DSCR9P59020 149 aa9.86□□□□□ -0.83
VCAN-212ENST00000515397 PPP2R2BQ00005 443 aa9.86□□□□□ -0.83
VCAN-212ENST00000515397 HNRNPA0Q13151 305 aaKnown RBP9.86□□□□□ -0.83
VCAN-212ENST00000515397 TRIM25Q14258 630 aaKnown RBP9.86□□□□□ -0.83
VCAN-212ENST00000515397 MEP1BQ16820 701 aa9.86□□□□□ -0.83
VCAN-212ENST00000515397 TMEM249Q2WGJ8 235 aa9.86□□□□□ -0.83
VCAN-212ENST00000515397 ANKDD1AQ495B1 522 aa9.86□□□□□ -0.83
VCAN-212ENST00000515397 CLEC12AQ5QGZ9 265 aa9.86□□□□□ -0.83
VCAN-212ENST00000515397 SLC35F1Q5T1Q4 408 aa9.86□□□□□ -0.83
VCAN-212ENST00000515397 FAM205BPQ63HN1 556 aa9.86□□□□□ -0.83
VCAN-212ENST00000515397 RGS7BPQ6MZT1 257 aaPredicted RBP9.86□□□□□ -0.83
VCAN-212ENST00000515397 PGBD2Q6P3X8 592 aa9.86□□□□□ -0.83
VCAN-212ENST00000515397 SMARCD3Q6STE5 483 aa9.86□□□□□ -0.83
VCAN-212ENST00000515397 DPY19L2P2Q6ZN68 376 aa9.86□□□□□ -0.83
VCAN-212ENST00000515397 DHFR2Q86XF0 187 aa9.86□□□□□ -0.83
VCAN-212ENST00000515397 OR1J1Q8NGS3 322 aa9.86□□□□□ -0.83
VCAN-212ENST00000515397 OR4K13Q8NH42 304 aa9.86□□□□□ -0.83
VCAN-212ENST00000515397 FANK1Q8TC84 345 aa9.86□□□□□ -0.83
VCAN-212ENST00000515397 BCAS4Q8TDM0 211 aa9.86□□□□□ -0.83
VCAN-212ENST00000515397 SLC7A6Q92536 515 aa9.86□□□□□ -0.83
VCAN-212ENST00000515397 POM121L2Q96KW2 1035 aa9.86□□□□□ -0.83
VCAN-212ENST00000515397 OR52D1Q9H346 318 aa9.86□□□□□ -0.83
VCAN-212ENST00000515397 POLE4Q9NR33 117 aa9.86□□□□□ -0.83
VCAN-212ENST00000515397 SLC7A8Q9UHI5 535 aa9.86□□□□□ -0.83
VCAN-212ENST00000515397 TMCC3Q9ULS5 477 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms