RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 ZBTB42B2RXF5 422 aa12.21□□□□□ -0.45
TCOF1-214ENST00000515035 H0YGG7 62 aa12.21□□□□□ -0.45
TCOF1-214ENST00000515035 KIR2DS3K7RE56 304 aa12.21□□□□□ -0.45
TCOF1-214ENST00000515035 TAPBPO15533 448 aa12.21□□□□□ -0.45
TCOF1-214ENST00000515035 NAT1P18440 290 aa12.21□□□□□ -0.45
TCOF1-214ENST00000515035 POU3F2P20265 443 aaPredicted RBP12.21□□□□□ -0.45
TCOF1-214ENST00000515035 KIR2DS5Q14953 304 aa12.21□□□□□ -0.45
TCOF1-214ENST00000515035 NECAP1Q8NC96 275 aa12.21□□□□□ -0.45
TCOF1-214ENST00000515035 OR6K3Q8NGY3 331 aa12.21□□□□□ -0.45
TCOF1-214ENST00000515035 INTS12Q96CB8 462 aaKnown RBP12.21□□□□□ -0.45
TCOF1-214ENST00000515035 Q96M85 177 aa12.21□□□□□ -0.45
TCOF1-214ENST00000515035 CDCP1Q9H5V8 836 aa12.21□□□□□ -0.45
TCOF1-214ENST00000515035 ZNF576Q9H609 170 aa12.21□□□□□ -0.45
TCOF1-214ENST00000515035 PLSCR5A0PG75 271 aa12.21□□□□□ -0.46
TCOF1-214ENST00000515035 PRKRAO75569 313 aaKnown RBP12.21□□□□□ -0.46
TCOF1-214ENST00000515035 IGFBP1P08833 259 aaPredicted RBP12.21□□□□□ -0.46
TCOF1-214ENST00000515035 HOXD9P28356 352 aaPredicted RBP12.21□□□□□ -0.46
TCOF1-214ENST00000515035 SLC6A11P48066 632 aa12.21□□□□□ -0.46
TCOF1-214ENST00000515035 MRPL19P49406 292 aaKnown RBP12.21□□□□□ -0.46
TCOF1-214ENST00000515035 MRPS21P82921 87 aaKnown RBP12.21□□□□□ -0.46
TCOF1-214ENST00000515035 MZT1Q08AG7 82 aa12.21□□□□□ -0.46
TCOF1-214ENST00000515035 TMEM176BQ3YBM2 270 aaPredicted RBP12.21□□□□□ -0.46
TCOF1-214ENST00000515035 LYSMD4Q5XG99 296 aa12.21□□□□□ -0.46
TCOF1-214ENST00000515035 ACSM5Q6NUN0 579 aa12.21□□□□□ -0.46
TCOF1-214ENST00000515035 DHRS4L2Q6PKH6 230 aa12.21□□□□□ -0.46
TCOF1-214ENST00000515035 C5orf46Q6UWT4 87 aa12.21□□□□□ -0.46
TCOF1-214ENST00000515035 IL34Q6ZMJ4 242 aa12.21□□□□□ -0.46
TCOF1-214ENST00000515035 GLCCI1Q86VQ1 547 aa12.21□□□□□ -0.46
TCOF1-214ENST00000515035 TMEFF1Q8IYR6 380 aa12.21□□□□□ -0.46
TCOF1-214ENST00000515035 SLC43A2Q8N370 569 aa12.21□□□□□ -0.46
TCOF1-214ENST00000515035 OPALINQ96PE5 141 aa12.21□□□□□ -0.46
TCOF1-214ENST00000515035 ZAR1LA6NP61 321 aa12.21□□□□□ -0.46
TCOF1-214ENST00000515035 SNRPGP15A8MWD9 76 aa12.21□□□□□ -0.46
TCOF1-214ENST00000515035 CYB5BO43169 146 aa12.21□□□□□ -0.46
TCOF1-214ENST00000515035 PRAMEF4O60810 478 aa12.21□□□□□ -0.46
TCOF1-214ENST00000515035 SPNP16150 400 aa12.21□□□□□ -0.46
TCOF1-214ENST00000515035 GTF2H5Q6ZYL4 71 aa12.21□□□□□ -0.46
TCOF1-214ENST00000515035 NKAIN4Q8IVV8 208 aa12.21□□□□□ -0.46
TCOF1-214ENST00000515035 RBMXL3Q8N7X1 1067 aaKnown RBP12.21□□□□□ -0.46
TCOF1-214ENST00000515035 PIGTQ969N2 578 aa12.21□□□□□ -0.46
TCOF1-214ENST00000515035 KIRREL1Q96J84 757 aa12.21□□□□□ -0.46
TCOF1-214ENST00000515035 INSM2Q96T92 566 aaPredicted RBP12.21□□□□□ -0.46
TCOF1-214ENST00000515035 PPT2Q9UMR5 302 aa12.21□□□□□ -0.46
TCOF1-214ENST00000515035 STRAPQ9Y3F4 350 aaKnown RBP12.21□□□□□ -0.46
TCOF1-214ENST00000515035 NQO2P16083 231 aa12.2□□□□□ -0.46
TCOF1-214ENST00000515035 ENDOGQ14249 297 aaKnown RBP12.2□□□□□ -0.46
TCOF1-214ENST00000515035 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.2□□□□□ -0.46
TCOF1-214ENST00000515035 FAM71E1Q6IPT2 247 aa12.2□□□□□ -0.46
TCOF1-214ENST00000515035 ZNF620Q6ZNG0 422 aa12.2□□□□□ -0.46
TCOF1-214ENST00000515035 KCNJ15Q99712 375 aa12.2□□□□□ -0.46
TCOF1-214ENST00000515035 HINT3Q9NQE9 182 aaKnown RBP12.2□□□□□ -0.46
TCOF1-214ENST00000515035 TM7SF3Q9NS93 570 aa12.2□□□□□ -0.46
TCOF1-214ENST00000515035 RGS11O94810 467 aa12.2□□□□□ -0.46
TCOF1-214ENST00000515035 DUSP1P28562 367 aa12.2□□□□□ -0.46
TCOF1-214ENST00000515035 GABRA2P47869 451 aa12.2□□□□□ -0.46
TCOF1-214ENST00000515035 ZNF133P52736 654 aaPredicted RBP12.2□□□□□ -0.46
TCOF1-214ENST00000515035 OR2T2Q6IF00 324 aa12.2□□□□□ -0.46
TCOF1-214ENST00000515035 Q6ZSR6 202 aa12.2□□□□□ -0.46
TCOF1-214ENST00000515035 BPIFCQ8NFQ6 507 aa12.2□□□□□ -0.46
TCOF1-214ENST00000515035 GNPNAT1Q96EK6 184 aaPredicted RBP12.2□□□□□ -0.46
TCOF1-214ENST00000515035 TVP23CQ96ET8 276 aa12.2□□□□□ -0.46
TCOF1-214ENST00000515035 ZNF251Q9BRH9 671 aa12.2□□□□□ -0.46
TCOF1-214ENST00000515035 TOLLIPQ9H0E2 274 aa12.2□□□□□ -0.46
TCOF1-214ENST00000515035 OPA3Q9H6K4 179 aa12.2□□□□□ -0.46
TCOF1-214ENST00000515035 CRLF2Q9HC73 371 aa12.2□□□□□ -0.46
TCOF1-214ENST00000515035 CHRNA9Q9UGM1 479 aa12.2□□□□□ -0.46
TCOF1-214ENST00000515035 CACNA1CQ13936 2221 aa12.2□□□□□ -0.46
TCOF1-214ENST00000515035 BTBD17A6NE02 478 aa12.2□□□□□ -0.46
TCOF1-214ENST00000515035 GPR171O14626 319 aa12.2□□□□□ -0.46
TCOF1-214ENST00000515035 EIF4EP06730 217 aaKnown RBP12.2□□□□□ -0.46
TCOF1-214ENST00000515035 ACHEP22303 614 aa12.2□□□□□ -0.46
TCOF1-214ENST00000515035 KIR2DL3P43628 341 aa12.2□□□□□ -0.46
TCOF1-214ENST00000515035 BIDP55957 195 aa12.2□□□□□ -0.46
TCOF1-214ENST00000515035 CLDN17P56750 224 aa12.2□□□□□ -0.46
TCOF1-214ENST00000515035 CTBSQ01459 385 aa12.2□□□□□ -0.46
TCOF1-214ENST00000515035 FABP5Q01469 135 aa12.2□□□□□ -0.46
TCOF1-214ENST00000515035 CLLU1Q5K131 121 aa12.2□□□□□ -0.46
TCOF1-214ENST00000515035 C9orf135Q5VTT2 229 aa12.2□□□□□ -0.46
TCOF1-214ENST00000515035 LCN15Q6UWW0 184 aa12.2□□□□□ -0.46
TCOF1-214ENST00000515035 TMEM207Q6UWW9 146 aa12.2□□□□□ -0.46
TCOF1-214ENST00000515035 VN1R2Q8NFZ6 395 aa12.2□□□□□ -0.46
TCOF1-214ENST00000515035 ZNF775Q96BV0 537 aaPredicted RBP12.2□□□□□ -0.46
TCOF1-214ENST00000515035 SAT2Q96F10 170 aaPredicted RBP12.2□□□□□ -0.46
TCOF1-214ENST00000515035 SRPK3Q9UPE1 567 aa12.2□□□□□ -0.46
TCOF1-214ENST00000515035 GLI4P10075 376 aa12.2□□□□□ -0.46
TCOF1-214ENST00000515035 CD1EP15812 388 aa12.2□□□□□ -0.46
TCOF1-214ENST00000515035 PRPH2P23942 346 aa12.2□□□□□ -0.46
TCOF1-214ENST00000515035 HLA-FP30511 346 aa12.2□□□□□ -0.46
TCOF1-214ENST00000515035 MAP2K6P52564 334 aa12.2□□□□□ -0.46
TCOF1-214ENST00000515035 EPHA4P54764 986 aa12.2□□□□□ -0.46
TCOF1-214ENST00000515035 SNRPNP63162 240 aaKnown RBP12.2□□□□□ -0.46
TCOF1-214ENST00000515035 ZNF90Q03938 601 aa12.2□□□□□ -0.46
TCOF1-214ENST00000515035 ZP2Q05996 745 aa12.2□□□□□ -0.46
TCOF1-214ENST00000515035 ARHGAP11BQ3KRB8 267 aa12.2□□□□□ -0.46
TCOF1-214ENST00000515035 RPUSD3Q6P087 351 aaKnown RBP12.2□□□□□ -0.46
TCOF1-214ENST00000515035 ZNF595Q8IYB9 648 aa12.2□□□□□ -0.46
TCOF1-214ENST00000515035 SLC16A11Q8NCK7 471 aa12.2□□□□□ -0.46
TCOF1-214ENST00000515035 FAM71CQ8NEG0 241 aa12.2□□□□□ -0.46
TCOF1-214ENST00000515035 TCTN2Q96GX1 697 aa12.2□□□□□ -0.46
TCOF1-214ENST00000515035 HHIPQ96QV1 700 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms