RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 CEACAM4O75871 244 aa11.4□□□□□ -0.58
PVT1-203ENST00000513868 AQP8O94778 261 aa11.4□□□□□ -0.58
PVT1-203ENST00000513868 RPP14O95059 124 aaKnown RBP11.4□□□□□ -0.58
PVT1-203ENST00000513868 ZFPL1O95159 310 aa11.4□□□□□ -0.58
PVT1-203ENST00000513868 LAP3P28838 519 aa11.4□□□□□ -0.58
PVT1-203ENST00000513868 NTF4P34130 210 aa11.4□□□□□ -0.58
PVT1-203ENST00000513868 EIF1AXP47813 144 aaKnown RBP11.4□□□□□ -0.58
PVT1-203ENST00000513868 ZNF133P52736 654 aaPredicted RBP11.4□□□□□ -0.58
PVT1-203ENST00000513868 PPIAP62937 165 aaKnown RBP11.4□□□□□ -0.58
PVT1-203ENST00000513868 PLGLB1Q02325 96 aa11.4□□□□□ -0.58
PVT1-203ENST00000513868 EIF2B1Q14232 305 aaKnown RBP11.4□□□□□ -0.58
PVT1-203ENST00000513868 DEFB109BQ30KR1 87 aa11.4□□□□□ -0.58
PVT1-203ENST00000513868 ACSM3Q53FZ2 586 aa11.4□□□□□ -0.58
PVT1-203ENST00000513868 ABLIM2Q6H8Q1 611 aa11.4□□□□□ -0.58
PVT1-203ENST00000513868 LRRN1Q6UXK5 716 aa11.4□□□□□ -0.58
PVT1-203ENST00000513868 FAM220AQ7Z4H9 259 aa11.4□□□□□ -0.58
PVT1-203ENST00000513868 CEACAM19Q7Z692 300 aa11.4□□□□□ -0.58
PVT1-203ENST00000513868 BTLAQ7Z6A9 289 aa11.4□□□□□ -0.58
PVT1-203ENST00000513868 ZNF454Q8N9F8 522 aa11.4□□□□□ -0.58
PVT1-203ENST00000513868 ST7LQ8TDW4 575 aa11.4□□□□□ -0.58
PVT1-203ENST00000513868 ASB17Q8WXJ9 295 aa11.4□□□□□ -0.58
PVT1-203ENST00000513868 ROBO4Q8WZ75 1007 aa11.4□□□□□ -0.58
PVT1-203ENST00000513868 RGP1Q92546 391 aaPredicted RBP11.4□□□□□ -0.58
PVT1-203ENST00000513868 TMEM54Q969K7 222 aa11.4□□□□□ -0.58
PVT1-203ENST00000513868 ZNF845Q96IR2 970 aaPredicted RBP11.4□□□□□ -0.58
PVT1-203ENST00000513868 KCNS3Q9BQ31 491 aa11.4□□□□□ -0.58
PVT1-203ENST00000513868 TTYH2Q9BSA4 534 aa11.4□□□□□ -0.58
PVT1-203ENST00000513868 C6orf62Q9GZU0 229 aaPredicted RBP11.4□□□□□ -0.58
PVT1-203ENST00000513868 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.4□□□□□ -0.582e-7■□□□□ 9.8
PVT1-203ENST00000513868 KCNN2Q9H2S1 579 aa11.4□□□□□ -0.58
PVT1-203ENST00000513868 IKZF2Q9UKS7 526 aa11.4□□□□□ -0.58
PVT1-203ENST00000513868 UGT2A1Q9Y4X1 527 aa11.4□□□□□ -0.58
PVT1-203ENST00000513868 KCNMB2Q9Y691 235 aa11.4□□□□□ -0.58
PVT1-203ENST00000513868 A0A1B0GTH9 108 aa11.4□□□□□ -0.59
PVT1-203ENST00000513868 SMIM30A4D0T7 59 aa11.4□□□□□ -0.59
PVT1-203ENST00000513868 HSPB2A8KAH6 182 aa11.4□□□□□ -0.59
PVT1-203ENST00000513868 NPIPA2E9PIF3 369 aa11.4□□□□□ -0.59
PVT1-203ENST00000513868 NPIPA3F8WFD2 350 aa11.4□□□□□ -0.59
PVT1-203ENST00000513868 J3QRK9 145 aa11.4□□□□□ -0.59
PVT1-203ENST00000513868 CTDSP2O14595 271 aa11.4□□□□□ -0.59
PVT1-203ENST00000513868 GPRIN2O60269 458 aa11.4□□□□□ -0.59
PVT1-203ENST00000513868 GFRA3O60609 400 aa11.4□□□□□ -0.59
PVT1-203ENST00000513868 ITGB2P05107 769 aa11.4□□□□□ -0.59
PVT1-203ENST00000513868 QDPRP09417 244 aa11.4□□□□□ -0.59
PVT1-203ENST00000513868 ZNF823P16415 610 aa11.4□□□□□ -0.59
PVT1-203ENST00000513868 ZNF708P17019 499 aa11.4□□□□□ -0.59
PVT1-203ENST00000513868 CAV3P56539 151 aa11.4□□□□□ -0.59
PVT1-203ENST00000513868 MRPL28Q13084 256 aaKnown RBP11.4□□□□□ -0.59
PVT1-203ENST00000513868 HNRNPA0Q13151 305 aaKnown RBP11.4□□□□□ -0.59
PVT1-203ENST00000513868 ALKBH1Q13686 389 aaKnown RBP11.4□□□□□ -0.59
PVT1-203ENST00000513868 HSPB2Q16082 182 aa11.4□□□□□ -0.59
PVT1-203ENST00000513868 FDX2Q6P4F2 183 aa11.4□□□□□ -0.59
PVT1-203ENST00000513868 UNQ9370/PRO34162Q6UXP9 181 aa11.4□□□□□ -0.59
PVT1-203ENST00000513868 NR2C2APQ86WQ0 139 aa11.4□□□□□ -0.59
PVT1-203ENST00000513868 LINC00346Q8IVM7 164 aa11.4□□□□□ -0.59
PVT1-203ENST00000513868 ZNF679Q8IYX0 411 aa11.4□□□□□ -0.59
PVT1-203ENST00000513868 PRSS35Q8N3Z0 413 aa11.4□□□□□ -0.59
PVT1-203ENST00000513868 TEX19Q8NA77 164 aa11.4□□□□□ -0.59
PVT1-203ENST00000513868 OR52N5Q8NH56 324 aa11.4□□□□□ -0.59
PVT1-203ENST00000513868 FNDC8Q8TC99 324 aa11.4□□□□□ -0.59
PVT1-203ENST00000513868 HAVCR2Q8TDQ0 301 aa11.4□□□□□ -0.59
PVT1-203ENST00000513868 ELOVL3Q9HB03 270 aa11.4□□□□□ -0.59
PVT1-203ENST00000513868 ACKR4Q9NPB9 350 aa11.4□□□□□ -0.59
PVT1-203ENST00000513868 GLTPQ9NZD2 209 aa11.4□□□□□ -0.59
PVT1-203ENST00000513868 FOXD3Q9UJU5 478 aaPredicted RBP11.4□□□□□ -0.59
PVT1-203ENST00000513868 FLVCR1Q9Y5Y0 555 aa11.4□□□□□ -0.59
PVT1-203ENST00000513868 URB1O60287 2271 aaKnown RBP11.39□□□□□ -0.59
PVT1-203ENST00000513868 IQCMA0A1B0GVH7 501 aa11.39□□□□□ -0.59
PVT1-203ENST00000513868 OR4C45A6NMZ5 311 aa11.39□□□□□ -0.59
PVT1-203ENST00000513868 CASKO14936 926 aa11.39□□□□□ -0.59
PVT1-203ENST00000513868 TLX3O43711 291 aaPredicted RBP11.39□□□□□ -0.59
PVT1-203ENST00000513868 SRSF10O75494 262 aaKnown RBP11.39□□□□□ -0.59
PVT1-203ENST00000513868 SPINK2P20155 84 aa11.39□□□□□ -0.59
PVT1-203ENST00000513868 CDAP32320 146 aa11.39□□□□□ -0.59
PVT1-203ENST00000513868 MTNR1BP49286 362 aa11.39□□□□□ -0.59
PVT1-203ENST00000513868 SELENOPP49908 381 aa11.39□□□□□ -0.59
PVT1-203ENST00000513868 ZNF846Q147U1 533 aa11.39□□□□□ -0.59
PVT1-203ENST00000513868 KCNMB1Q16558 191 aa11.39□□□□□ -0.59
PVT1-203ENST00000513868 ZMAT1Q5H9K5 638 aa11.39□□□□□ -0.59
PVT1-203ENST00000513868 DCXRQ7Z4W1 244 aa11.39□□□□□ -0.59
PVT1-203ENST00000513868 FAM109AQ8N4B1 249 aa11.39□□□□□ -0.59
PVT1-203ENST00000513868 TMEM178AQ8NBL3 297 aa11.39□□□□□ -0.59
PVT1-203ENST00000513868 OR2G2Q8NGZ5 317 aa11.39□□□□□ -0.59
PVT1-203ENST00000513868 RNF128Q8TEB7 428 aa11.39□□□□□ -0.59
PVT1-203ENST00000513868 S100ZQ8WXG8 99 aa11.39□□□□□ -0.59
PVT1-203ENST00000513868 BORCS5Q969J3 196 aa11.39□□□□□ -0.59
PVT1-203ENST00000513868 CPNE4Q96A23 557 aaPredicted RBP11.39□□□□□ -0.59
PVT1-203ENST00000513868 HMG20AQ9NP66 347 aa11.39□□□□□ -0.59
PVT1-203ENST00000513868 CYB5R1Q9UHQ9 305 aa11.39□□□□□ -0.59
PVT1-203ENST00000513868 LIPGQ9Y5X9 500 aa11.39□□□□□ -0.59
PVT1-203ENST00000513868 MED12LQ86YW9 2145 aa11.38□□□□□ -0.59
PVT1-203ENST00000513868 A0A1W2PPL8 197 aa11.38□□□□□ -0.59
PVT1-203ENST00000513868 CYTIPO60759 359 aa11.38□□□□□ -0.59
PVT1-203ENST00000513868 NCR1O76036 304 aa11.38□□□□□ -0.59
PVT1-203ENST00000513868 PNPP00491 289 aa11.38□□□□□ -0.59
PVT1-203ENST00000513868 CALRP27797 417 aaKnown RBP11.38□□□□□ -0.59
PVT1-203ENST00000513868 KIR3DL2P43630 455 aa11.38□□□□□ -0.59
PVT1-203ENST00000513868 CSNK1A1P48729 337 aa11.38□□□□□ -0.59
PVT1-203ENST00000513868 C10orf128Q5T292 105 aa11.38□□□□□ -0.59
PVT1-203ENST00000513868 KCTD18Q6PI47 426 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms