RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 ELK3P41970 407 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 ASMTP46597 345 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 CCNG1P51959 295 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 NCBP2P52298 156 aaKnown RBP eCLIP3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 TERF1P54274 439 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 ATP12AP54707 1039 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 SLC35A1P78382 337 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 LCN2P80188 198 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 SNTB2Q13425 540 aaKnown RBP3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 DCTN2Q13561 401 aaKnown RBP3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 QPRTQ15274 297 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 TOMM34Q15785 309 aaPredicted RBP3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 FAM83EQ2M2I3 478 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 TRMT5Q32P41 509 aaKnown RBP3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 SPIN4Q56A73 249 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 DEFB121Q5J5C9 76 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 C9orf135Q5VTT2 229 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 TMEM268Q5VZI3 342 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 AP1ARQ63HQ0 302 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 TMEM154Q6P9G4 183 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 C11orf88Q6PI97 169 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 CCDC137Q6PK04 289 aaKnown RBP3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 LRRN1Q6UXK5 716 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 CASP12Q6UXS9 341 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 GDPGP1Q6ZNW5 385 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 Q6ZTK2 550 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 AAED1Q7RTV5 226 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 GOLGA7Q7Z5G4 137 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 DDIASQ8IXT1 998 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 C1orf52Q8N6N3 182 aaKnown RBP3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 WFDC9Q8NEX5 89 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 C16orf78Q8WTQ4 265 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 GRK7Q8WTQ7 553 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 SSMEM1Q8WWF3 244 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 SELENOMQ8WWX9 145 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 OIT3Q8WWZ8 545 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 PIK3R3Q92569 461 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 CDKL2Q92772 493 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 MAGOHBQ96A72 148 aaKnown RBP3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 UPRTQ96BW1 309 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 ELMOD3Q96FG2 381 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 SLC47A1Q96FL8 570 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 AURKBQ96GD4 344 aaPredicted RBP3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 AMDHD1Q96NU7 426 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 STACQ99469 402 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 GPR22Q99680 433 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 B9D2Q9BPU9 175 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 LINC00470Q9BZP3 86 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 PIGUQ9H490 435 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 GLIPR2Q9H4G4 154 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 ALG9Q9H6U8 611 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 NOL11Q9H8H0 719 aaKnown RBP3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 NOX3Q9HBY0 568 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 CRLF2Q9HC73 371 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 MMP26Q9NRE1 261 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 ACER3Q9NUN7 267 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 SLCO1C1Q9NYB5 712 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 TXNDC16Q9P2K2 825 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 KCNG2Q9UJ96 466 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 FBXL3Q9UKT7 428 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 TMCO1Q9UM00 188 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 PCDHGB4Q9UN71 923 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 SNX6Q9UNH7 406 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 CARD8Q9Y2G2 431 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 PSAT1Q9Y617 370 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 TENM2Q9NT68 2774 aa3.04□□□□□ -1.92
PDLIM5-218ENST00000513341 IGLV3-9A0A075B6K5 115 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 A0A096LPK6 155 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 KIR2DS1A0A191URI9 304 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 GNG14A0A1W2PPG7 69 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 OR6C68A6NDL8 312 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 SH2D7A6NKC9 451 aaPredicted RBP3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 TRIM49D1C9J1S8 452 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 NPIPB9F8W1W9 429 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 NR5A2O00482 541 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 DNALI1O14645 258 aaPredicted RBP3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 ZNF208O43345 1280 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 RAD51CO43502 376 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 OTCP00480 354 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 PDYNP01213 254 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 KRT6AP02538 564 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 KRT6BP04259 564 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 ANXA4P09525 319 aaPredicted RBP3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 TFPIP10646 304 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 GFAPP14136 432 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 ATP6V1C1P21283 382 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 CD80P33681 288 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 SPRP35270 261 aaPredicted RBP3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 PGM1P36871 562 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 KRT6CP48668 564 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 GALK2Q01415 458 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 ACSM2AQ08AH3 577 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 C2orf80Q0P641 193 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 MERTKQ12866 999 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 HERPUD1Q15011 391 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 CD226Q15762 336 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 DEFB112Q30KQ8 113 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 GLIPR1L2Q4G1C9 344 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 TMEM155Q4W5P6 130 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 AVPI1Q5T686 147 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms