RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 MSR1P21757 451 aa11□□□□□ -0.65
PDPN-210ENST00000513143 CRHBPP24387 322 aa11□□□□□ -0.65
PDPN-210ENST00000513143 LSM6P62312 80 aaKnown RBP11□□□□□ -0.65
PDPN-210ENST00000513143 TGFBR3Q03167 851 aa11□□□□□ -0.65
PDPN-210ENST00000513143 POU4F2Q12837 409 aa11□□□□□ -0.65
PDPN-210ENST00000513143 SGCAQ16586 387 aa11□□□□□ -0.65
PDPN-210ENST00000513143 PCK2Q16822 640 aa11□□□□□ -0.65
PDPN-210ENST00000513143 SLC25A35Q3KQZ1 300 aa11□□□□□ -0.65
PDPN-210ENST00000513143 TEX30Q5JUR7 227 aa11□□□□□ -0.65
PDPN-210ENST00000513143 FAM27BQ5VT28 67 aa11□□□□□ -0.65
PDPN-210ENST00000513143 C9orf135Q5VTT2 229 aa11□□□□□ -0.65
PDPN-210ENST00000513143 ZNF786Q8N393 782 aa11□□□□□ -0.65
PDPN-210ENST00000513143 ZNF433Q8N7K0 673 aaPredicted RBP11□□□□□ -0.65
PDPN-210ENST00000513143 OR51G2Q8NGK0 314 aa11□□□□□ -0.65
PDPN-210ENST00000513143 OR1K1Q8NGR3 316 aa11□□□□□ -0.65
PDPN-210ENST00000513143 LILRB4Q8NHJ6 448 aa11□□□□□ -0.65
PDPN-210ENST00000513143 C11orf40Q8WZ69 217 aa11□□□□□ -0.65
PDPN-210ENST00000513143 GGHQ92820 318 aa11□□□□□ -0.65
PDPN-210ENST00000513143 WDR76Q9H967 626 aa11□□□□□ -0.65
PDPN-210ENST00000513143 ADGRL4Q9HBW9 690 aa11□□□□□ -0.65
PDPN-210ENST00000513143 FKBP14Q9NWM8 211 aa11□□□□□ -0.65
PDPN-210ENST00000513143 SCN3BQ9NY72 215 aa11□□□□□ -0.65
PDPN-210ENST00000513143 ELOVL5Q9NYP7 299 aa11□□□□□ -0.65
PDPN-210ENST00000513143 CNOT2Q9NZN8 540 aaKnown RBP11□□□□□ -0.65
PDPN-210ENST00000513143 EXOGQ9Y2C4 368 aaKnown RBP11□□□□□ -0.65
PDPN-210ENST00000513143 COMMD3-BMI1R4GMX3 469 aa11□□□□□ -0.65
PDPN-210ENST00000513143 CACNA1CQ13936 2221 aa10.99□□□□□ -0.65
PDPN-210ENST00000513143 IRGMA1A4Y4 181 aa10.99□□□□□ -0.65
PDPN-210ENST00000513143 EFCAB10A6NFE3 127 aa10.99□□□□□ -0.65
PDPN-210ENST00000513143 J3QRE1 110 aa10.99□□□□□ -0.65
PDPN-210ENST00000513143 ZNF593O00488 134 aaPredicted RBP10.99□□□□□ -0.65
PDPN-210ENST00000513143 SELENOFO60613 162 aa10.99□□□□□ -0.65
PDPN-210ENST00000513143 FAM20BO75063 409 aa10.99□□□□□ -0.65
PDPN-210ENST00000513143 OR8G3PP0DMU2 310 aa10.99□□□□□ -0.65
PDPN-210ENST00000513143 PIPP12273 146 aaPredicted RBP10.99□□□□□ -0.65
PDPN-210ENST00000513143 B4GALT1P15291 398 aa10.99□□□□□ -0.65
PDPN-210ENST00000513143 ZNF823P16415 610 aa10.99□□□□□ -0.65
PDPN-210ENST00000513143 AGAP20933 346 aa10.99□□□□□ -0.65
PDPN-210ENST00000513143 ENTPD1P49961 510 aa10.99□□□□□ -0.65
PDPN-210ENST00000513143 RAB40BQ12829 278 aa10.99□□□□□ -0.65
PDPN-210ENST00000513143 ENDOGQ14249 297 aaKnown RBP10.99□□□□□ -0.65
PDPN-210ENST00000513143 GABRA6Q16445 453 aa10.99□□□□□ -0.65
PDPN-210ENST00000513143 MEP1BQ16820 701 aa10.99□□□□□ -0.65
PDPN-210ENST00000513143 FBXL19-AS1Q494R0 122 aa10.99□□□□□ -0.65
PDPN-210ENST00000513143 KLHL22Q53GT1 634 aa10.99□□□□□ -0.65
PDPN-210ENST00000513143 SFRP5Q5T4F7 317 aa10.99□□□□□ -0.65
PDPN-210ENST00000513143 ANKRD16Q6P6B7 361 aa10.99□□□□□ -0.65
PDPN-210ENST00000513143 STAC2Q6ZMT1 411 aa10.99□□□□□ -0.65
PDPN-210ENST00000513143 ZNF813Q6ZN06 617 aa10.99□□□□□ -0.65
PDPN-210ENST00000513143 SLC16A9Q7RTY1 509 aa10.99□□□□□ -0.65
PDPN-210ENST00000513143 CXorf67Q86X51 503 aaPredicted RBP10.99□□□□□ -0.65
PDPN-210ENST00000513143 ERI1Q8IV48 349 aaKnown RBP10.99□□□□□ -0.65
PDPN-210ENST00000513143 SLC22A24Q8N4F4 322 aa10.99□□□□□ -0.65
PDPN-210ENST00000513143 C1orf162Q8NEQ5 155 aaPredicted RBP10.99□□□□□ -0.65
PDPN-210ENST00000513143 OR10H5Q8NGA6 315 aa10.99□□□□□ -0.65
PDPN-210ENST00000513143 HTRA1Q92743 480 aa10.99□□□□□ -0.65
PDPN-210ENST00000513143 BCL2L2Q92843 193 aaPredicted RBP10.99□□□□□ -0.65
PDPN-210ENST00000513143 LGALS12Q96DT0 336 aa10.99□□□□□ -0.65
PDPN-210ENST00000513143 INTS14Q96SY0 518 aa10.99□□□□□ -0.65
PDPN-210ENST00000513143 CNN2Q99439 309 aaKnown RBP10.99□□□□□ -0.65
PDPN-210ENST00000513143 RHNO1Q9BSD3 238 aa10.99□□□□□ -0.65
PDPN-210ENST00000513143 HDHD5Q9BXW7 423 aa10.99□□□□□ -0.65
PDPN-210ENST00000513143 FGF20Q9NP95 211 aaPredicted RBP10.99□□□□□ -0.65
PDPN-210ENST00000513143 KCNG2Q9UJ96 466 aa10.99□□□□□ -0.65
PDPN-210ENST00000513143 TPRKBQ9Y3C4 175 aa10.99□□□□□ -0.65
PDPN-210ENST00000513143 CIB4A0PJX0 185 aa10.98□□□□□ -0.65
PDPN-210ENST00000513143 LYZL6O75951 148 aa10.98□□□□□ -0.65
PDPN-210ENST00000513143 SEC14L2O76054 403 aa10.98□□□□□ -0.65
PDPN-210ENST00000513143 APOL3O95236 402 aa10.98□□□□□ -0.65
PDPN-210ENST00000513143 FARS2O95363 451 aaKnown RBP10.98□□□□□ -0.65
PDPN-210ENST00000513143 MRPL3P09001 348 aaKnown RBP10.98□□□□□ -0.65
PDPN-210ENST00000513143 CST2P09228 141 aa10.98□□□□□ -0.65
PDPN-210ENST00000513143 PSMB1P20618 241 aaKnown RBP10.98□□□□□ -0.65
PDPN-210ENST00000513143 ATP6V1E1P36543 226 aa10.98□□□□□ -0.65
PDPN-210ENST00000513143 CD79BP40259 229 aa10.98□□□□□ -0.65
PDPN-210ENST00000513143 NAA10P41227 235 aaPredicted RBP10.98□□□□□ -0.65
PDPN-210ENST00000513143 ASCL1P50553 236 aa10.98□□□□□ -0.65
PDPN-210ENST00000513143 CHN2P52757 468 aa10.98□□□□□ -0.65
PDPN-210ENST00000513143 ADAM8P78325 824 aa10.98□□□□□ -0.65
PDPN-210ENST00000513143 SLC35A2P78381 396 aa10.98□□□□□ -0.65
PDPN-210ENST00000513143 OTPQ5XKR4 325 aa10.98□□□□□ -0.65
PDPN-210ENST00000513143 OR7E24Q6IFN5 339 aa10.98□□□□□ -0.65
PDPN-210ENST00000513143 XKRXQ6PP77 449 aa10.98□□□□□ -0.65
PDPN-210ENST00000513143 KLHL24Q6TFL4 600 aa10.98□□□□□ -0.65
PDPN-210ENST00000513143 CDC20BQ86Y33 519 aa10.98□□□□□ -0.65
PDPN-210ENST00000513143 ZNF540Q8NDQ6 660 aa10.98□□□□□ -0.65
PDPN-210ENST00000513143 OR4F15Q8NGB8 312 aa10.98□□□□□ -0.65
PDPN-210ENST00000513143 OR52I1Q8NGK6 324 aa10.98□□□□□ -0.65
PDPN-210ENST00000513143 OR6N2Q8NGY6 317 aa10.98□□□□□ -0.65
PDPN-210ENST00000513143 IPCEF1Q8WWN9 437 aaPredicted RBP10.98□□□□□ -0.65
PDPN-210ENST00000513143 NR1H4Q96RI1 486 aaPredicted RBP10.98□□□□□ -0.65
PDPN-210ENST00000513143 WACQ9BTA9 647 aa10.98□□□□□ -0.65
PDPN-210ENST00000513143 ZNF416Q9BWM5 594 aa10.98□□□□□ -0.65
PDPN-210ENST00000513143 YIPF3Q9GZM5 350 aa10.98□□□□□ -0.65
PDPN-210ENST00000513143 DUSP21Q9H596 190 aa10.98□□□□□ -0.65
PDPN-210ENST00000513143 EMC7Q9NPA0 242 aa10.98□□□□□ -0.65
PDPN-210ENST00000513143 CYB5R1Q9UHQ9 305 aa10.98□□□□□ -0.65
PDPN-210ENST00000513143 BLOC1S6Q9UL45 172 aa10.98□□□□□ -0.65
PDPN-210ENST00000513143 MYRFQ9Y2G1 1151 aa10.98□□□□□ -0.65
PDPN-210ENST00000513143 PCDHGB1Q9Y5G3 927 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms