RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 KCNN2Q9H2S1 579 aa7.2□□□□□ -1.26
HTT-209ENST00000512068 ACKR4Q9NPB9 350 aa7.2□□□□□ -1.26
HTT-209ENST00000512068 EMC3Q9P0I2 261 aa7.2□□□□□ -1.26
HTT-209ENST00000512068 B3GAT1Q9P2W7 334 aa7.2□□□□□ -1.26
HTT-209ENST00000512068 COA3Q9Y2R0 106 aaPredicted RBP7.2□□□□□ -1.26
HTT-209ENST00000512068 MSRB2Q9Y3D2 182 aa7.2□□□□□ -1.26
HTT-209ENST00000512068 MED12Q93074 2177 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 METTL15A6NJ78 407 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 ZNF593O00488 134 aaPredicted RBP7.19□□□□□ -1.26
HTT-209ENST00000512068 GPR171O14626 319 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 SLC43A1O75387 559 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 CEACAM4O75871 244 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 GLSO94925 669 aaPredicted RBP7.19□□□□□ -1.26
HTT-209ENST00000512068 TFP02787 698 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 CTLA4P16410 223 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 ZNF182P17025 639 aaPredicted RBP7.19□□□□□ -1.26
HTT-209ENST00000512068 CD53P19397 219 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 LAP3P28838 519 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 UGT2B10P36537 528 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 PEX19P40855 299 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 P2RY4P51582 365 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 AGFG1P52594 562 aaKnown RBP7.19□□□□□ -1.26
HTT-209ENST00000512068 UCNP55089 124 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 CLDN20P56880 219 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 NCS1P62166 190 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 ZNF85Q03923 595 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 RUNX1T1Q06455 604 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 FMODQ06828 376 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 EGR3Q06889 387 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 RASGEF1BQ0VAM2 473 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 GPR50Q13585 617 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 TPBGQ13641 420 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 EIF2B1Q14232 305 aaKnown RBP7.19□□□□□ -1.26
HTT-209ENST00000512068 ZNF169Q14929 603 aaPredicted RBP7.19□□□□□ -1.26
HTT-209ENST00000512068 SSX1Q16384 188 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 BCL2A1Q16548 175 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 CTF1Q16619 201 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 CDONQ4KMG0 1287 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 TP53I3Q53FA7 332 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 LINC01590Q5TEZ4 76 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 IGFL2Q6UWQ7 119 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 PAMR1Q6UXH9 720 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 ASB18Q6ZVZ8 466 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 CREB3L2Q70SY1 520 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 AAED1Q7RTV5 226 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 DPY19L4Q7Z388 723 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 P4HA3Q7Z4N8 544 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 KRT77Q7Z794 578 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 GGNQ86UU5 652 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 CDC20BQ86Y33 519 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 EGFL6Q8IUX8 553 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 TIGD4Q8IY51 512 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 ZFP41Q8N8Y5 198 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 EXD3Q8N9H8 876 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 OR2AJ1Q8NGZ0 328 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 NEIL3Q8TAT5 605 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 NDNFQ8TB73 568 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 KCTD7Q96MP8 289 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 FOXN4Q96NZ1 517 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 SMAD5Q99717 465 aaKnown RBP7.19□□□□□ -1.26
HTT-209ENST00000512068 TMED9Q9BVK6 235 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 MROQ9BYG7 248 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 SRXN1Q9BYN0 137 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 ULBP2Q9BZM5 246 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 COMMD4Q9H0A8 199 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 DEFB127Q9H1M4 99 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 ISG20L2Q9H9L3 353 aaKnown RBP7.19□□□□□ -1.26
HTT-209ENST00000512068 SEC61A2Q9H9S3 476 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 KLHL9Q9P2J3 617 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 KCNG2Q9UJ96 466 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 CAMK2AQ9UQM7 478 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 RCE1Q9Y256 329 aa7.19□□□□□ -1.26
HTT-209ENST00000512068 PCDHGA9Q9Y5G4 932 aaKnown RBP7.19□□□□□ -1.26
HTT-209ENST00000512068 ZNF292O60281 2723 aa7.18□□□□□ -1.26
HTT-209ENST00000512068 IGLV1-36A0A0B4J1U3 117 aa7.18□□□□□ -1.26
HTT-209ENST00000512068 DCTN6O00399 190 aa7.18□□□□□ -1.26
HTT-209ENST00000512068 SMAD9O15198 467 aaKnown RBP7.18□□□□□ -1.26
HTT-209ENST00000512068 SULT1C4O75897 302 aa7.18□□□□□ -1.26
HTT-209ENST00000512068 RPP14O95059 124 aaKnown RBP7.18□□□□□ -1.26
HTT-209ENST00000512068 HRGP04196 525 aa7.18□□□□□ -1.26
HTT-209ENST00000512068 QDPRP09417 244 aa7.18□□□□□ -1.26
HTT-209ENST00000512068 PGA4P0DJD7 388 aa7.18□□□□□ -1.26
HTT-209ENST00000512068 PGA3P0DJD8 388 aa7.18□□□□□ -1.26
HTT-209ENST00000512068 FCGR2AP12318 317 aa7.18□□□□□ -1.26
HTT-209ENST00000512068 ZNF708P17019 499 aa7.18□□□□□ -1.26
HTT-209ENST00000512068 MYL9P24844 172 aa7.18□□□□□ -1.26
HTT-209ENST00000512068 CD79BP40259 229 aa7.18□□□□□ -1.26
HTT-209ENST00000512068 LHX2P50458 406 aa7.18□□□□□ -1.26
HTT-209ENST00000512068 RIDAP52758 137 aaKnown RBP7.18□□□□□ -1.26
HTT-209ENST00000512068 SUCLG1P53597 346 aaKnown RBP7.18□□□□□ -1.26
HTT-209ENST00000512068 HCCSP53701 268 aa7.18□□□□□ -1.26
HTT-209ENST00000512068 OR12D2P58182 307 aa7.18□□□□□ -1.26
HTT-209ENST00000512068 RPS25P62851 125 aaKnown RBP7.18□□□□□ -1.26
HTT-209ENST00000512068 H3F3AP84243 136 aa7.18□□□□□ -1.26
HTT-209ENST00000512068 SLC3A1Q07837 685 aa7.18□□□□□ -1.26
HTT-209ENST00000512068 AQP6Q13520 282 aa7.18□□□□□ -1.26
HTT-209ENST00000512068 SLC17A1Q14916 467 aa7.18□□□□□ -1.26
HTT-209ENST00000512068 SPCS2Q15005 226 aa7.18□□□□□ -1.26
HTT-209ENST00000512068 TAF13Q15543 124 aa7.18□□□□□ -1.26
HTT-209ENST00000512068 CCDC58Q4VC31 144 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms