RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 TNP2Q05952 138 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 ZP4Q12836 540 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 CCNIQ14094 377 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 SF3A2Q15428 464 aaKnown RBP4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 PDZD11Q5EBL8 140 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 SAXO2Q658L1 398 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 LPCAT3Q6P1A2 487 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 CEACAM20Q6UY09 585 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 DPY19L2P2Q6ZN68 376 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 AMIGO2Q86SJ2 522 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 LAS2Q8IYD9 372 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 TSTD1Q8NFU3 115 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 OR2AK2Q8NG84 335 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 OR52I1Q8NGK6 324 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 OR4A4PQ8NGN8 299 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 OR10X1Q8NGY0 326 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 OR6K3Q8NGY3 331 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 TMEM163Q8TC26 289 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 C10orf82Q8WW14 230 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 UFD1Q92890 307 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 TMBIM1Q969X1 311 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 ZBTB8AQ96BR9 441 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 CXorf40BQ96DE9 158 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 MS4A14Q96JA4 679 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 GPR137Q96N19 417 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 ATF6BQ99941 703 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 TCEAL7Q9BRU2 100 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 CHRNA10Q9GZZ6 450 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 RHOJQ9H4E5 214 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 KIR3DX1Q9H7L2 352 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 HMG20AQ9NP66 347 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 PHPT1Q9NRX4 125 aaPredicted RBP4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 GLTPQ9NZD2 209 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 MIOXQ9UGB7 285 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 EBF1Q9UH73 591 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 ZNF223Q9UK11 482 aaPredicted RBP4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 NEU3Q9UQ49 428 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 MRPS28Q9Y2Q9 187 aaKnown RBP4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 LSM4Q9Y4Z0 139 aaKnown RBP4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 GON4LQ3T8J9 2241 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 MYO18AQ92614 2054 aaKnown RBP4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 A0A0X1KG70 313 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 CDHR4A6H8M9 788 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 LEUTXA8MZ59 168 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 CLDN25C9JDP6 229 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 TSTD3H0UI37 97 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 J3KR12 359 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 XRCC3O43542 346 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 FZD7O75084 574 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 AGFG2O95081 481 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 C9P02748 559 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 ALDOBP05062 364 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 SFTPBP07988 381 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 OR8U9P0C7N5 309 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 DANCRP0C864 163 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 DAOP14920 347 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 LHCGRP22888 699 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 KDELR1P24390 212 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 DDOSTP39656 456 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 CEACAM6P40199 344 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 IDH3GP51553 393 aaPredicted RBP4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 RHOAP61586 193 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 SEMG2Q02383 582 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 TLE3Q04726 772 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 GRK1Q15835 563 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 OGFRL1Q5TC84 451 aaPredicted RBP4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 MROH9Q5TGP6 573 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 TMEM65Q6PI78 240 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 DNM1P34Q6PK57 102 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 KYAT3Q6YP21 454 aaKnown RBP4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 ZNF767PQ75MW2 155 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 ZNF605Q86T29 641 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 OR6V1Q8N148 313 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 SPEM1Q8N4L4 309 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 CLDN22Q8N7P3 220 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 MDGA1Q8NFP4 955 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 OR8J3Q8NGG0 315 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 OR13D1Q8NGV5 346 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 OR2AJ1Q8NGZ0 328 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 OR2T11Q8NH01 316 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 ADAMTS14Q8WXS8 1223 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 MOB3AQ96BX8 217 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 C8orf44Q96CB5 159 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 NXPE2Q96DL1 559 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 YIPF6Q96EC8 236 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 SMIM12Q96EX1 92 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 FOPNLQ96NB1 174 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 KLHL32Q96NJ5 620 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 TIMP4Q99727 224 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 VPS25Q9BRG1 176 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 NDUFAF3Q9BU61 184 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 TRAF4Q9BUZ4 470 aaPredicted RBP4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 MND1Q9BWT6 205 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 NEUROG2Q9H2A3 272 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 RPF2Q9H7B2 306 aaKnown RBP4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 VNN3Q9NY84 501 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 TREM2Q9NZC2 230 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 GHRLQ9UBU3 117 aa4.5□□□□□ -1.69
TRAPPC11-208ENST00000511955 IGLV3-10A0A075B6K4 115 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 141 ms