RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 TXNDC12O95881 172 aa12.07□□□□□ -0.48
DDX41-212ENST00000511040 CST1P01037 141 aa12.07□□□□□ -0.48
DDX41-212ENST00000511040 MSR1P21757 451 aa12.07□□□□□ -0.48
DDX41-212ENST00000511040 NR4A1P22736 598 aa12.07□□□□□ -0.48
DDX41-212ENST00000511040 APEX1P27695 318 aaKnown RBP12.07□□□□□ -0.48
DDX41-212ENST00000511040 GUCA1AP43080 201 aaPredicted RBP12.07□□□□□ -0.48
DDX41-212ENST00000511040 CENPAP49450 140 aa12.07□□□□□ -0.48
DDX41-212ENST00000511040 GALK2Q01415 458 aa12.07□□□□□ -0.48
DDX41-212ENST00000511040 PLP2Q04941 152 aa12.07□□□□□ -0.48
DDX41-212ENST00000511040 ENDOGQ14249 297 aaKnown RBP12.07□□□□□ -0.48
DDX41-212ENST00000511040 MSMPQ1L6U9 139 aa12.07□□□□□ -0.48
DDX41-212ENST00000511040 MICAQ29983 383 aa12.07□□□□□ -0.48
DDX41-212ENST00000511040 SLC35F1Q5T1Q4 408 aa12.07□□□□□ -0.48
DDX41-212ENST00000511040 FAM27BQ5VT28 67 aa12.07□□□□□ -0.48
DDX41-212ENST00000511040 FOXL2NBQ6ZUU3 175 aa12.07□□□□□ -0.48
DDX41-212ENST00000511040 DPPA2Q7Z7J5 298 aa12.07□□□□□ -0.48
DDX41-212ENST00000511040 CIARTQ8N365 385 aaPredicted RBP12.07□□□□□ -0.48
DDX41-212ENST00000511040 SVOPLQ8N434 492 aa12.07□□□□□ -0.48
DDX41-212ENST00000511040 CPEB3Q8NE35 698 aaKnown RBP12.07□□□□□ -0.48
DDX41-212ENST00000511040 OR4K13Q8NH42 304 aa12.07□□□□□ -0.48
DDX41-212ENST00000511040 POP5Q969H6 163 aaKnown RBP12.07□□□□□ -0.48
DDX41-212ENST00000511040 TSSK2Q96PF2 358 aa12.07□□□□□ -0.48
DDX41-212ENST00000511040 CDH20Q9HBT6 801 aa12.07□□□□□ -0.48
DDX41-212ENST00000511040 POLE4Q9NR33 117 aa12.07□□□□□ -0.48
DDX41-212ENST00000511040 FBXL3Q9UKT7 428 aa12.07□□□□□ -0.48
DDX41-212ENST00000511040 FZR1Q9UM11 496 aa12.07□□□□□ -0.48
DDX41-212ENST00000511040 COA3Q9Y2R0 106 aaPredicted RBP12.07□□□□□ -0.48
DDX41-212ENST00000511040 CDH10Q9Y6N8 788 aa12.07□□□□□ -0.48
DDX41-212ENST00000511040 IQCMA0A1B0GVH7 501 aa12.06□□□□□ -0.48
DDX41-212ENST00000511040 TCRBV3S1A0A5B6 114 aa12.06□□□□□ -0.48
DDX41-212ENST00000511040 GNGT2O14610 69 aa12.06□□□□□ -0.48
DDX41-212ENST00000511040 AHCYL1O43865 530 aa12.06□□□□□ -0.48
DDX41-212ENST00000511040 SSX4O60224 188 aa12.06□□□□□ -0.48
DDX41-212ENST00000511040 KHDRBS3O75525 346 aaKnown RBP12.06□□□□□ -0.48
DDX41-212ENST00000511040 SOX14O95416 240 aa12.06□□□□□ -0.48
DDX41-212ENST00000511040 FAM157BP0CG42 384 aa12.06□□□□□ -0.48
DDX41-212ENST00000511040 HIST1H1CP16403 213 aaKnown RBP12.06□□□□□ -0.48
DDX41-212ENST00000511040 NOS3P29474 1203 aa12.06□□□□□ -0.48
DDX41-212ENST00000511040 SNRPD2P62316 118 aaKnown RBP12.06□□□□□ -0.48
DDX41-212ENST00000511040 PSG4Q00888 419 aa12.06□□□□□ -0.48
DDX41-212ENST00000511040 SWI5Q1ZZU3 235 aa12.06□□□□□ -0.48
DDX41-212ENST00000511040 CLEC12BQ2HXU8 276 aa12.06□□□□□ -0.48
DDX41-212ENST00000511040 LEG1Q6P5S2 330 aa12.06□□□□□ -0.48
DDX41-212ENST00000511040 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.06□□□□□ -0.48
DDX41-212ENST00000511040 TMEM179BQ7Z7N9 219 aa12.06□□□□□ -0.48
DDX41-212ENST00000511040 ADCK1Q86TW2 530 aa12.06□□□□□ -0.48
DDX41-212ENST00000511040 JAZF1Q86VZ6 243 aa12.06□□□□□ -0.48
DDX41-212ENST00000511040 LINC00471Q8N535 108 aa12.06□□□□□ -0.48
DDX41-212ENST00000511040 OR10G2Q8NGC3 310 aa12.06□□□□□ -0.48
DDX41-212ENST00000511040 OR8D4Q8NGM9 314 aa12.06□□□□□ -0.48
DDX41-212ENST00000511040 SLCO4A1Q96BD0 722 aa12.06□□□□□ -0.48
DDX41-212ENST00000511040 NMNAT3Q96T66 252 aa12.06□□□□□ -0.48
DDX41-212ENST00000511040 ZNF416Q9BWM5 594 aa12.06□□□□□ -0.48
DDX41-212ENST00000511040 PLA2G12AQ9BZM1 189 aa12.06□□□□□ -0.48
DDX41-212ENST00000511040 OR2H1Q9GZK4 316 aa12.06□□□□□ -0.48
DDX41-212ENST00000511040 NUAK2Q9H093 628 aa12.06□□□□□ -0.48
DDX41-212ENST00000511040 FN3KQ9H479 309 aa12.06□□□□□ -0.48
DDX41-212ENST00000511040 ZNF442Q9H7R0 627 aa12.06□□□□□ -0.48
DDX41-212ENST00000511040 DLL4Q9NR61 685 aa12.06□□□□□ -0.48
DDX41-212ENST00000511040 VSX1Q9NZR4 365 aaPredicted RBP12.06□□□□□ -0.48
DDX41-212ENST00000511040 SPEF1Q9Y4P9 236 aa12.06□□□□□ -0.48
DDX41-212ENST00000511040 FAM171A2A8MVW0 826 aa12.05□□□□□ -0.48
DDX41-212ENST00000511040 B9A039 149 aa12.05□□□□□ -0.48
DDX41-212ENST00000511040 DCTN6O00399 190 aa12.05□□□□□ -0.48
DDX41-212ENST00000511040 FKBP6O75344 327 aa12.05□□□□□ -0.48
DDX41-212ENST00000511040 ATP5HO75947 161 aa12.05□□□□□ -0.48
DDX41-212ENST00000511040 LY6HO94772 140 aa12.05□□□□□ -0.48
DDX41-212ENST00000511040 RENP00797 406 aa12.05□□□□□ -0.48
DDX41-212ENST00000511040 CST2P09228 141 aa12.05□□□□□ -0.48
DDX41-212ENST00000511040 APEHP13798 732 aaKnown RBP12.05□□□□□ -0.48
DDX41-212ENST00000511040 CCNOP22674 350 aa12.05□□□□□ -0.48
DDX41-212ENST00000511040 RASSF2P50749 326 aa12.05□□□□□ -0.48
DDX41-212ENST00000511040 TNK1Q13470 666 aa12.05□□□□□ -0.48
DDX41-212ENST00000511040 RAB35Q15286 201 aa12.05□□□□□ -0.48
DDX41-212ENST00000511040 TBC1D28Q2M2D7 210 aa12.05□□□□□ -0.48
DDX41-212ENST00000511040 ZNF774Q6NX45 483 aa12.05□□□□□ -0.48
DDX41-212ENST00000511040 GLB1L2Q8IW92 636 aa12.05□□□□□ -0.48
DDX41-212ENST00000511040 HS3ST5Q8IZT8 346 aa12.05□□□□□ -0.48
DDX41-212ENST00000511040 SDR9C7Q8NEX9 313 aa12.05□□□□□ -0.48
DDX41-212ENST00000511040 OR52L1Q8NGH7 329 aa12.05□□□□□ -0.48
DDX41-212ENST00000511040 OR52E2Q8NGJ4 325 aa12.05□□□□□ -0.48
DDX41-212ENST00000511040 GIPC3Q8TF64 312 aa12.05□□□□□ -0.48
DDX41-212ENST00000511040 SMR3AQ99954 134 aa12.05□□□□□ -0.48
DDX41-212ENST00000511040 VRK1Q99986 396 aaPredicted RBP12.05□□□□□ -0.48
DDX41-212ENST00000511040 SYT3Q9BQG1 590 aa12.05□□□□□ -0.48
DDX41-212ENST00000511040 WNT5BQ9H1J7 359 aa12.05□□□□□ -0.48
DDX41-212ENST00000511040 PLK3Q9H4B4 646 aa12.05□□□□□ -0.48
DDX41-212ENST00000511040 GSX1Q9H4S2 264 aaPredicted RBP12.05□□□□□ -0.48
DDX41-212ENST00000511040 SRA1Q9HD15 236 aaKnown RBP12.05□□□□□ -0.48
DDX41-212ENST00000511040 TBC1D23Q9NUY8 699 aa12.05□□□□□ -0.48
DDX41-212ENST00000511040 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.05□□□□□ -0.48
DDX41-212ENST00000511040 CMAHPQ9Y471 501 aa12.05□□□□□ -0.48
DDX41-212ENST00000511040 PMF1-BGLAPU3KQ54 211 aa12.05□□□□□ -0.48
DDX41-212ENST00000511040 VPS13CQ709C8 3753 aa12.04□□□□□ -0.48
DDX41-212ENST00000511040 ARFGEF3Q5TH69 2177 aa12.04□□□□□ -0.48
DDX41-212ENST00000511040 TMEM129A0AVI4 362 aa12.04□□□□□ -0.48
DDX41-212ENST00000511040 C12orf71A8MTZ7 269 aa12.04□□□□□ -0.48
DDX41-212ENST00000511040 VSTM5A8MXK1 200 aa12.04□□□□□ -0.48
DDX41-212ENST00000511040 H7C417 338 aa12.04□□□□□ -0.48
DDX41-212ENST00000511040 ARPC3O15145 178 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms