RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 PSMG2Q969U7 264 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 AKR1E2Q96JD6 320 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 TSSK3Q96PN8 268 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 TAAR1Q96RJ0 339 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 ZNF251Q9BRH9 671 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 SLC30A2Q9BRI3 323 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 C19orf24Q9BVV8 132 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 PARD6BQ9BYG5 372 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 OR2AG1Q9H205 316 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 GANQ9H2C0 597 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 SLC38A1Q9H2H9 487 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 OR51B6Q9H340 312 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 ZNF702PQ9H963 129 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 CD209Q9NNX6 404 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 SAMSN1Q9NSI8 373 aaKnown RBP3.04□□□□□ -1.92
NUP54-209ENST00000510569 UFSP2Q9NUQ7 469 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 LYARQ9NX58 379 aaKnown RBP3.04□□□□□ -1.92
NUP54-209ENST00000510569 MRPL39Q9NYK5 338 aaKnown RBP3.04□□□□□ -1.92
NUP54-209ENST00000510569 PTTG3PQ9NZH4 202 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 CD274Q9NZQ7 290 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 ZNF490Q9ULM2 529 aaPredicted RBP3.04□□□□□ -1.92
NUP54-209ENST00000510569 PAIP2BQ9ULR5 123 aaKnown RBP3.04□□□□□ -1.92
NUP54-209ENST00000510569 SCML1Q9UN30 329 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 V9GYQ6 96 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 PLCH1Q4KWH8 1693 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 LMO7Q8WWI1 1683 aa3.04□□□□□ -1.92
NUP54-209ENST00000510569 ABCC6O95255 1503 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 MRC1P22897 1456 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 USP6P35125 1406 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 DCCP43146 1447 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 GRIN2DO15399 1336 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 IGLV8-61A0A075B6I0 122 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 PPIAL4CA0A0B4J2A2 164 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 A0A1B0GW15 77 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 GOLGA6L10A6NI86 522 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 PRAMEF26H0Y7S4 382 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 MKRN2OSH3BPM6 223 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 KLRC4-KLRK1H3BQV0 150 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 DLGAP1O14490 977 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 RAB29O14966 203 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 OR10H3O60404 316 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 NDUFA7O95182 113 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 BRI3O95415 125 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 HIST1H2AGP0C0S8 130 aaPredicted RBP3.03□□□□□ -1.92
NUP54-209ENST00000510569 SMIM10L1P0DMW3 83 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 PPIAL4GP0DN37 164 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 SYT1P21579 422 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 STOMP27105 288 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 HMOX2P30519 316 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 IL2RGP31785 369 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 HNRNPH3P31942 346 aaKnown RBP3.03□□□□□ -1.92
NUP54-209ENST00000510569 PCK1P35558 622 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 MAGEA2P43356 314 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 XCR1P46094 333 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 MRPL19P49406 292 aaKnown RBP3.03□□□□□ -1.92
NUP54-209ENST00000510569 OR2B6P58173 313 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 AP3S2P59780 193 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 VSNL1P62760 191 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 HERV-K104P63124 156 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 ADARB1P78563 741 aaKnown RBP3.03□□□□□ -1.92
NUP54-209ENST00000510569 MRPS25P82663 173 aaKnown RBP3.03□□□□□ -1.92
NUP54-209ENST00000510569 PITPNAQ00169 270 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 CHRNB3Q05901 458 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 OR1C1Q15619 314 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 CAMK4Q16566 473 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 C5orf64Q2M2E5 130 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 LINC01620Q4KN68 170 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 C5orf47Q569G3 176 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 BEND6Q5SZJ8 279 aaPredicted RBP3.03□□□□□ -1.92
NUP54-209ENST00000510569 KRTAP5-7Q6L8G8 165 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 FAM71F2Q6NXP2 309 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 KCNIP4Q6PIL6 250 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 CLEC18BQ6UXF7 455 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 ASCL4Q6XD76 172 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 RTL4Q6ZR62 310 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 H2BFWTQ7Z2G1 175 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 TRIM69Q86WT6 500 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.03□□□□□ -1.92
NUP54-209ENST00000510569 MKXQ8IYA7 352 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 SLC38A6Q8IZM9 456 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 ZNF786Q8N393 782 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 ALLCQ8N6M5 410 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 C19orf18Q8NEA5 215 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 CCDC112Q8NEF3 446 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 OR4D6Q8NGJ1 314 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 OR51G2Q8NGK0 314 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 OR5M1Q8NGP8 315 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 RPL3LQ92901 407 aaKnown RBP3.03□□□□□ -1.92
NUP54-209ENST00000510569 SMARCD2Q92925 531 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 HIST1H2ACQ93077 130 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 TMEM45BQ96B21 275 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 C8orf44Q96CB5 159 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 RAB39BQ96DA2 213 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 RAB3CQ96E17 227 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 SMIM10Q96HG1 83 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 SH3YL1Q96HL8 342 aaPredicted RBP3.03□□□□□ -1.92
NUP54-209ENST00000510569 HPDLQ96IR7 371 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 CAPNS2Q96L46 248 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 ZNF578Q96N58 590 aaPredicted RBP3.03□□□□□ -1.92
NUP54-209ENST00000510569 CYP2S1Q96SQ9 504 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms