RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 C1orf74Q96LT6 269 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 SPATA33Q96N06 139 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 GPR20Q99678 358 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 ABHD6Q9BV23 337 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 ELOVL1Q9BW60 279 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 C1QTNF2Q9BXJ5 285 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 PRRG4Q9BZD6 226 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 ACPTQ9BZG2 426 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 RAB33BQ9H082 229 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 PLEKHF2Q9H8W4 249 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 CHODLQ9H9P2 273 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 ARNT2Q9HBZ2 717 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 PLSCR4Q9NRQ2 329 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 CUTCQ9NTM9 273 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 LPAR3Q9UBY5 353 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 IL17BQ9UHF5 180 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 ICAM5Q9UMF0 924 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 SLC22A13Q9Y226 551 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 RCE1Q9Y256 329 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 HEG1Q9ULI3 1381 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 CCDC88AQ3V6T2 1871 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 A0A087WUU8 490 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 LOC100289279A0A1B0GTE1 492 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 TTC24A2A3L6 582 aaPredicted RBP3.3□□□□□ -1.88
USP53-205ENST00000509769 LINC01549A6NIU2 74 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 AQP7P3A6NL99 342 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 M0R2N6 131 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 HAS3O00219 553 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 SDHDO14521 159 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 CYB561D2O14569 222 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 DVL2O14641 736 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 CTDSPLO15194 276 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 EMC8O43402 210 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 DOK2O60496 412 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 PAPLNO95428 1278 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 NTSR2O95665 410 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 HBZP02008 142 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 ANKRD34CP0C6C1 535 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 TRGC1P0CF51 173 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 PGA3P0DJD8 388 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 DPP4P27487 766 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 OTX1P32242 354 aaPredicted RBP3.3□□□□□ -1.88
USP53-205ENST00000509769 BRS3P32247 399 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 SLC6A12P48065 614 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 PSMB2P49721 201 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 DSC2Q02487 901 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 SLC10A2Q12908 348 aaPredicted RBP3.3□□□□□ -1.88
USP53-205ENST00000509769 IL10RAQ13651 578 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 IL13RA2Q14627 380 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 MBTPS1Q14703 1052 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 PCLAFQ15004 111 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 SHHQ15465 462 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 HLA-DRB5Q30154 266 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 MAJINQ3KP22 176 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.3□□□□□ -1.88
USP53-205ENST00000509769 MEPCEQ7L2J0 689 aaKnown RBP3.3□□□□□ -1.88
USP53-205ENST00000509769 OTOP2Q7RTS6 562 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 ADGRE4PQ86SQ3 457 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 FBXL6Q8N531 539 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 DUSP18Q8NEJ0 188 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 OR10W1Q8NGF6 305 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 OR8B3Q8NGG8 313 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 HMGCLL1Q8TB92 370 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 FBXW5Q969U6 566 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 SLC25A44Q96H78 314 aaPredicted RBP3.3□□□□□ -1.88
USP53-205ENST00000509769 TSGA13Q96PP4 275 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 MCHR1Q99705 422 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 SMIM3Q9BZL3 60 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 CRISPLD2Q9H0B8 497 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 KCNMB3Q9NPA1 279 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 GPRC5CQ9NQ84 441 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 PHPT1Q9NRX4 125 aaPredicted RBP3.3□□□□□ -1.88
USP53-205ENST00000509769 EMC9Q9Y3B6 208 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 PLIN4Q96Q06 1357 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 A0A1B0GV90 55 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 OR2W5A6NFC9 320 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 VSTM2BA6NLU5 285 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 J3KRW8 73 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 MAN2B1O00754 1011 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 ISLRO14498 428 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 CTDNEP1O95476 244 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 SP9P0CG40 484 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 FGF3P11487 239 aaPredicted RBP3.3□□□□□ -1.88
USP53-205ENST00000509769 GABRB1P18505 474 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 IDSP22304 550 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 SLC6A1P30531 599 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 CPOXP36551 454 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 RAD52P43351 418 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 COMPP49747 757 aaPredicted RBP3.3□□□□□ -1.88
USP53-205ENST00000509769 RABGGTBP53611 331 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 ATP1B3P54709 279 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 CDKN2DP55273 166 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 ERVFC1-1P60608 527 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 RPS20P60866 119 aaKnown RBP3.3□□□□□ -1.88
USP53-205ENST00000509769 ROM1Q03395 351 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 ZNF415Q09FC8 603 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 SELENBP1Q13228 472 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 EIF3IQ13347 325 aaKnown RBP3.3□□□□□ -1.88
USP53-205ENST00000509769 CEACAM7Q14002 265 aa3.3□□□□□ -1.88
USP53-205ENST00000509769 Q5PR19 223 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms