RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 ZNF566Q969W8 418 aa7.59□□□□□ -1.19
PDLIM5-213ENST00000509357 SLC25A44Q96H78 314 aaPredicted RBP7.59□□□□□ -1.19
PDLIM5-213ENST00000509357 BOD1Q96IK1 185 aa7.59□□□□□ -1.19
PDLIM5-213ENST00000509357 LRR1Q96L50 414 aa7.59□□□□□ -1.19
PDLIM5-213ENST00000509357 GLTPQ9NZD2 209 aa7.59□□□□□ -1.19
PDLIM5-213ENST00000509357 TMCC3Q9ULS5 477 aa7.59□□□□□ -1.19
PDLIM5-213ENST00000509357 CDH10Q9Y6N8 788 aa7.59□□□□□ -1.19
PDLIM5-213ENST00000509357 RTTNQ86VV8 2226 aa7.58□□□□□ -1.2
PDLIM5-213ENST00000509357 IGLV1-36A0A0B4J1U3 117 aa7.58□□□□□ -1.2
PDLIM5-213ENST00000509357 SLC22A23A1A5C7 686 aa7.58□□□□□ -1.2
PDLIM5-213ENST00000509357 HTR3EA5X5Y0 456 aa7.58□□□□□ -1.2
PDLIM5-213ENST00000509357 DEAF1O75398 565 aaPredicted RBP7.58□□□□□ -1.2
PDLIM5-213ENST00000509357 MPZL1O95297 269 aa7.58□□□□□ -1.2
PDLIM5-213ENST00000509357 FARS2O95363 451 aaKnown RBP7.58□□□□□ -1.2
PDLIM5-213ENST00000509357 RAB36O95755 333 aa7.58□□□□□ -1.2
PDLIM5-213ENST00000509357 HLA-HP01893 362 aa7.58□□□□□ -1.2
PDLIM5-213ENST00000509357 QDPRP09417 244 aa7.58□□□□□ -1.2
PDLIM5-213ENST00000509357 OR4A8P0C604 315 aa7.58□□□□□ -1.2
PDLIM5-213ENST00000509357 CECR9P0C854 216 aa7.58□□□□□ -1.2
PDLIM5-213ENST00000509357 CLUP10909 449 aa7.58□□□□□ -1.2
PDLIM5-213ENST00000509357 B4GALT1P15291 398 aa7.58□□□□□ -1.2
PDLIM5-213ENST00000509357 CBR1P16152 277 aa7.58□□□□□ -1.2
PDLIM5-213ENST00000509357 ANOS1P23352 680 aa7.58□□□□□ -1.2
PDLIM5-213ENST00000509357 FASP25445 335 aa7.58□□□□□ -1.2
PDLIM5-213ENST00000509357 SDHAP31040 664 aa7.58□□□□□ -1.2
PDLIM5-213ENST00000509357 SERPINF1P36955 418 aa7.58□□□□□ -1.2
PDLIM5-213ENST00000509357 CLRN1P58418 232 aa7.58□□□□□ -1.2
PDLIM5-213ENST00000509357 NAAAQ02083 359 aa7.58□□□□□ -1.2
PDLIM5-213ENST00000509357 PIGFQ07326 219 aa7.58□□□□□ -1.2
PDLIM5-213ENST00000509357 KRR1Q13601 381 aaKnown RBP7.58□□□□□ -1.2
PDLIM5-213ENST00000509357 CARTPTQ16568 116 aa7.58□□□□□ -1.2
PDLIM5-213ENST00000509357 GSG1Q2KHT4 349 aa7.58□□□□□ -1.2
PDLIM5-213ENST00000509357 SLC35F1Q5T1Q4 408 aa7.58□□□□□ -1.2
PDLIM5-213ENST00000509357 C10orf128Q5T292 105 aa7.58□□□□□ -1.2
PDLIM5-213ENST00000509357 DPY19L2P2Q6ZN68 376 aa7.58□□□□□ -1.2
PDLIM5-213ENST00000509357 FOXL2NBQ6ZUU3 175 aa7.58□□□□□ -1.2
PDLIM5-213ENST00000509357 ZNF627Q7L945 461 aa7.58□□□□□ -1.2
PDLIM5-213ENST00000509357 RRM2BQ7LG56 351 aa7.58□□□□□ -1.2
PDLIM5-213ENST00000509357 ZNF584Q8IVC4 421 aa7.58□□□□□ -1.2
PDLIM5-213ENST00000509357 MAPK1IP1LQ8NDC0 245 aa7.58□□□□□ -1.2
PDLIM5-213ENST00000509357 NPEPL1Q8NDH3 523 aa7.58□□□□□ -1.2
PDLIM5-213ENST00000509357 ICA1LQ8NDH6 482 aa7.58□□□□□ -1.2
PDLIM5-213ENST00000509357 SDR9C7Q8NEX9 313 aa7.58□□□□□ -1.2
PDLIM5-213ENST00000509357 OR4F15Q8NGB8 312 aa7.58□□□□□ -1.2
PDLIM5-213ENST00000509357 OR4K13Q8NH42 304 aa7.58□□□□□ -1.2
PDLIM5-213ENST00000509357 NRBF2Q96F24 287 aa7.58□□□□□ -1.2
PDLIM5-213ENST00000509357 ZNF570Q96NI8 536 aa7.58□□□□□ -1.2
PDLIM5-213ENST00000509357 ERMAPQ96PL5 475 aaPredicted RBP7.58□□□□□ -1.2
PDLIM5-213ENST00000509357 NMNAT3Q96T66 252 aa7.58□□□□□ -1.2
PDLIM5-213ENST00000509357 CIB1Q99828 191 aa7.58□□□□□ -1.2
PDLIM5-213ENST00000509357 FOXB1Q99853 325 aa7.58□□□□□ -1.2
PDLIM5-213ENST00000509357 VRK1Q99986 396 aaPredicted RBP7.58□□□□□ -1.2
PDLIM5-213ENST00000509357 OSBPL10Q9BXB5 764 aa7.58□□□□□ -1.2
PDLIM5-213ENST00000509357 REG4Q9BYZ8 158 aa7.58□□□□□ -1.2
PDLIM5-213ENST00000509357 GRIP2Q9C0E4 1043 aa7.58□□□□□ -1.2
PDLIM5-213ENST00000509357 SYT4Q9H2B2 425 aa7.58□□□□□ -1.2
PDLIM5-213ENST00000509357 CA10Q9NS85 328 aa7.58□□□□□ -1.2
PDLIM5-213ENST00000509357 B3GNT2Q9NY97 397 aa7.58□□□□□ -1.2
PDLIM5-213ENST00000509357 VSX1Q9NZR4 365 aaPredicted RBP7.58□□□□□ -1.2
PDLIM5-213ENST00000509357 SPEF1Q9Y4P9 236 aa7.58□□□□□ -1.2
PDLIM5-213ENST00000509357 PRSS37A4D1T9 235 aa7.57□□□□□ -1.2
PDLIM5-213ENST00000509357 GNGT2O14610 69 aa7.57□□□□□ -1.2
PDLIM5-213ENST00000509357 EI24O14681 340 aa7.57□□□□□ -1.2
PDLIM5-213ENST00000509357 ARPC3O15145 178 aa7.57□□□□□ -1.2
PDLIM5-213ENST00000509357 DHHO43323 396 aa7.57□□□□□ -1.2
PDLIM5-213ENST00000509357 MGRN1O60291 552 aa7.57□□□□□ -1.2
PDLIM5-213ENST00000509357 E2F6O75461 281 aa7.57□□□□□ -1.2
PDLIM5-213ENST00000509357 STAMBPO95630 424 aa7.57□□□□□ -1.2
PDLIM5-213ENST00000509357 IGHG1P01857 330 aa7.57□□□□□ -1.2
PDLIM5-213ENST00000509357 ALPLP05186 524 aa7.57□□□□□ -1.2
PDLIM5-213ENST00000509357 GAAP10253 952 aa7.57□□□□□ -1.2
PDLIM5-213ENST00000509357 PCSK6P29122 969 aa7.57□□□□□ -1.2
PDLIM5-213ENST00000509357 CALCRP30988 508 aa7.57□□□□□ -1.2
PDLIM5-213ENST00000509357 RPL4P36578 427 aaKnown RBP7.57□□□□□ -1.2
PDLIM5-213ENST00000509357 PTDSS1P48651 473 aaKnown RBP7.57□□□□□ -1.2
PDLIM5-213ENST00000509357 DAP3P51398 398 aaKnown RBP7.57□□□□□ -1.2
PDLIM5-213ENST00000509357 DSCR9P59020 149 aa7.57□□□□□ -1.2
PDLIM5-213ENST00000509357 EFNB1P98172 346 aa7.57□□□□□ -1.2
PDLIM5-213ENST00000509357 CDK5Q00535 292 aa7.57□□□□□ -1.2
PDLIM5-213ENST00000509357 ENDOGQ14249 297 aaKnown RBP7.57□□□□□ -1.2
PDLIM5-213ENST00000509357 MEP1BQ16820 701 aa7.57□□□□□ -1.2
PDLIM5-213ENST00000509357 C3orf36Q3SXR2 165 aa7.57□□□□□ -1.2
PDLIM5-213ENST00000509357 ANKDD1AQ495B1 522 aa7.57□□□□□ -1.2
PDLIM5-213ENST00000509357 HDDC2Q7Z4H3 204 aa7.57□□□□□ -1.2
PDLIM5-213ENST00000509357 SKA3Q8IX90 412 aa7.57□□□□□ -1.2
PDLIM5-213ENST00000509357 CDK20Q8IZL9 346 aa7.57□□□□□ -1.2
PDLIM5-213ENST00000509357 OR6V1Q8N148 313 aa7.57□□□□□ -1.2
PDLIM5-213ENST00000509357 PQLC1Q8N2U9 271 aa7.57□□□□□ -1.2
PDLIM5-213ENST00000509357 LNX2Q8N448 690 aa7.57□□□□□ -1.2
PDLIM5-213ENST00000509357 FAM169BQ8N8A8 192 aa7.57□□□□□ -1.2
PDLIM5-213ENST00000509357 CYB561A3Q8NBI2 242 aa7.57□□□□□ -1.2
PDLIM5-213ENST00000509357 SLC37A3Q8NCC5 494 aa7.57□□□□□ -1.2
PDLIM5-213ENST00000509357 IL17RDQ8NFM7 739 aa7.57□□□□□ -1.2
PDLIM5-213ENST00000509357 NRG4Q8WWG1 115 aa7.57□□□□□ -1.2
PDLIM5-213ENST00000509357 NSMAFQ92636 917 aa7.57□□□□□ -1.2
PDLIM5-213ENST00000509357 POP5Q969H6 163 aaKnown RBP7.57□□□□□ -1.2
PDLIM5-213ENST00000509357 CENPNQ96H22 339 aaPredicted RBP7.57□□□□□ -1.2
PDLIM5-213ENST00000509357 RAB3IPQ96QF0 476 aaPredicted RBP7.57□□□□□ -1.2
PDLIM5-213ENST00000509357 MBOAT4Q96T53 435 aa7.57□□□□□ -1.2
PDLIM5-213ENST00000509357 SH3GL3Q99963 347 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms