RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 CD3EP07766 207 aa6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 CD14P08571 375 aa6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 QDPRP09417 244 aa6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 CDKN1AP38936 164 aa6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 CDKN2AP42771 156 aaKnown RBP6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 DAP3P51398 398 aaKnown RBP6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 MNAT1P51948 309 aa6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 ART1P52961 327 aa6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 NR1H2P55055 460 aa6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 SH3BGRP55822 239 aaPredicted RBP6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 RPL27P61353 136 aaKnown RBP6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 NAAAQ02083 359 aa6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 MST1LQ2TV78 715 aa6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 ZBED5Q49AG3 693 aa6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 DNAL1Q4LDG9 190 aa6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 MTX3Q5HYI7 312 aa6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 ZNF362Q5T0B9 420 aaPredicted RBP6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 C1orf94Q6P1W5 598 aa6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 OAFQ86UD1 273 aa6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 DTX2Q86UW9 622 aa6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 CYP4Z1Q86W10 505 aa6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 AQP12AQ8IXF9 295 aa6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 RNF113BQ8IZP6 322 aaKnown RBP6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 CIARTQ8N365 385 aaPredicted RBP6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 ARIH2OSQ8N7S6 290 aa6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 ZNF611Q8N823 705 aa6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 PAPD5Q8NDF8 572 aaKnown RBP6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 OR6N1Q8NGY5 312 aa6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 NSMAFQ92636 917 aa6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 PPP1R14AQ96A00 147 aa6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 FBXO17Q96EF6 278 aa6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 SAMD8Q96LT4 415 aa6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 ADAD1Q96M93 576 aaKnown RBP6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 TSSK2Q96PF2 358 aa6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 FOXC2Q99958 501 aa6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 OR52D1Q9H346 318 aa6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 POFUT1Q9H488 388 aa6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 EMC7Q9NPA0 242 aa6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 ARMC1Q9NVT9 282 aa6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 ITGB1BP2Q9UKP3 347 aa6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 MOKQ9UQ07 419 aa6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 U3KQV3 271 aa6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 NSD1Q96L73 2696 aaPredicted RBP6.23□□□□□ -1.41
TOPBP1-207ENST00000509162 A0A096LNT2 108 aa6.22□□□□□ -1.41
TOPBP1-207ENST00000509162 OR6C65A6NJZ3 312 aa6.22□□□□□ -1.41
TOPBP1-207ENST00000509162 TNFRSF11BO00300 401 aa6.22□□□□□ -1.41
TOPBP1-207ENST00000509162 SOCS2O14508 198 aa6.22□□□□□ -1.41
TOPBP1-207ENST00000509162 CASKO14936 926 aa6.22□□□□□ -1.41
TOPBP1-207ENST00000509162 NDUFB2O95178 105 aa6.22□□□□□ -1.41
TOPBP1-207ENST00000509162 BCL10O95999 233 aa6.22□□□□□ -1.41
TOPBP1-207ENST00000509162 GASTP01350 101 aa6.22□□□□□ -1.41
TOPBP1-207ENST00000509162 IGHV4-39P01824 125 aa6.22□□□□□ -1.41
TOPBP1-207ENST00000509162 RAP2AP10114 183 aa6.22□□□□□ -1.41
TOPBP1-207ENST00000509162 HIST1H1CP16403 213 aaKnown RBP6.22□□□□□ -1.41
TOPBP1-207ENST00000509162 ACVR1BP36896 505 aa6.22□□□□□ -1.41
TOPBP1-207ENST00000509162 WNT5AP41221 380 aa6.22□□□□□ -1.41
TOPBP1-207ENST00000509162 PTH2RP49190 550 aa6.22□□□□□ -1.41
TOPBP1-207ENST00000509162 ERVS71-1P61550 626 aa6.22□□□□□ -1.41
TOPBP1-207ENST00000509162 KRTAP1-1Q07627 177 aa6.22□□□□□ -1.41
TOPBP1-207ENST00000509162 TRAP1Q12931 704 aaKnown RBP6.22□□□□□ -1.41
TOPBP1-207ENST00000509162 NPRL3Q12980 569 aa6.22□□□□□ -1.41
TOPBP1-207ENST00000509162 TSPAN31Q12999 210 aa6.22□□□□□ -1.41
TOPBP1-207ENST00000509162 FLOT2Q14254 428 aa6.22□□□□□ -1.41
TOPBP1-207ENST00000509162 RAB39AQ14964 217 aa6.22□□□□□ -1.41
TOPBP1-207ENST00000509162 OR2T5Q6IEZ7 315 aa6.22□□□□□ -1.41
TOPBP1-207ENST00000509162 OR7E24Q6IFN5 339 aa6.22□□□□□ -1.41
TOPBP1-207ENST00000509162 SMARCD3Q6STE5 483 aa6.22□□□□□ -1.41
TOPBP1-207ENST00000509162 DNM1P46Q6ZS02 220 aa6.22□□□□□ -1.41
TOPBP1-207ENST00000509162 P2RY8Q86VZ1 359 aa6.22□□□□□ -1.41
TOPBP1-207ENST00000509162 SLC22A24Q8N4F4 322 aa6.22□□□□□ -1.41
TOPBP1-207ENST00000509162 IQCF1Q8N6M8 205 aa6.22□□□□□ -1.41
TOPBP1-207ENST00000509162 AQP11Q8NBQ7 271 aa6.22□□□□□ -1.41
TOPBP1-207ENST00000509162 CPEB3Q8NE35 698 aaKnown RBP6.22□□□□□ -1.41
TOPBP1-207ENST00000509162 SDR9C7Q8NEX9 313 aa6.22□□□□□ -1.41
TOPBP1-207ENST00000509162 OR10G2Q8NGC3 310 aa6.22□□□□□ -1.41
TOPBP1-207ENST00000509162 OR2T29Q8NH02 315 aa6.22□□□□□ -1.41
TOPBP1-207ENST00000509162 GTF3AQ92664 365 aaKnown RBP6.22□□□□□ -1.41
TOPBP1-207ENST00000509162 PERPQ96FX8 193 aa6.22□□□□□ -1.41
TOPBP1-207ENST00000509162 ZNF570Q96NI8 536 aa6.22□□□□□ -1.41
TOPBP1-207ENST00000509162 CCL19Q99731 98 aa6.22□□□□□ -1.41
TOPBP1-207ENST00000509162 ALG12Q9BV10 488 aa6.22□□□□□ -1.41
TOPBP1-207ENST00000509162 CHID1Q9BWS9 393 aa6.22□□□□□ -1.41
TOPBP1-207ENST00000509162 HCAR1Q9BXC0 346 aa6.22□□□□□ -1.41
TOPBP1-207ENST00000509162 TRIM15Q9C019 465 aa6.22□□□□□ -1.41
TOPBP1-207ENST00000509162 WNT5BQ9H1J7 359 aa6.22□□□□□ -1.41
TOPBP1-207ENST00000509162 SYT4Q9H2B2 425 aa6.22□□□□□ -1.41
TOPBP1-207ENST00000509162 ZNF701Q9NV72 531 aaPredicted RBP6.22□□□□□ -1.41
TOPBP1-207ENST00000509162 VSX1Q9NZR4 365 aaPredicted RBP6.22□□□□□ -1.41
TOPBP1-207ENST00000509162 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.22□□□□□ -1.41
TOPBP1-207ENST00000509162 MYEF2Q9P2K5 600 aaKnown RBP6.22□□□□□ -1.41
TOPBP1-207ENST00000509162 TMEM5Q9Y2B1 443 aa6.22□□□□□ -1.41
TOPBP1-207ENST00000509162 SAMHD1Q9Y3Z3 626 aaKnown RBP6.22□□□□□ -1.41
TOPBP1-207ENST00000509162 IER3IP1Q9Y5U9 82 aa6.22□□□□□ -1.41
TOPBP1-207ENST00000509162 CDH10Q9Y6N8 788 aa6.22□□□□□ -1.41
TOPBP1-207ENST00000509162 CR1P17927 2039 aa6.21□□□□□ -1.41
TOPBP1-207ENST00000509162 RTTNQ86VV8 2226 aa6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 LOC100509620A0A075B734 347 aa6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 A0A1W2PRG6 482 aa6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 TMEM129A0AVI4 362 aa6.21□□□□□ -1.42
TOPBP1-207ENST00000509162 PRSS37A4D1T9 235 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms