RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 CCL2P13500 99 aa16.04■□□□□ 0.16
UBE3D-207ENST00000509102 ZNF32P17041 273 aa16.04■□□□□ 0.16
UBE3D-207ENST00000509102 MSR1P21757 451 aa16.04■□□□□ 0.16
UBE3D-207ENST00000509102 APEX1P27695 318 aaKnown RBP16.04■□□□□ 0.16
UBE3D-207ENST00000509102 GDI2P50395 445 aaKnown RBP16.04■□□□□ 0.16
UBE3D-207ENST00000509102 UCP2P55851 309 aa16.04■□□□□ 0.16
UBE3D-207ENST00000509102 GPR139Q6DWJ6 353 aa16.04■□□□□ 0.16
UBE3D-207ENST00000509102 DEFB107AQ8IZN7 70 aa16.04■□□□□ 0.16
UBE3D-207ENST00000509102 ZNF786Q8N393 782 aa16.04■□□□□ 0.16
UBE3D-207ENST00000509102 OR52J3Q8NH60 311 aa16.04■□□□□ 0.16
UBE3D-207ENST00000509102 SYNPRQ8TBG9 265 aa16.04■□□□□ 0.16
UBE3D-207ENST00000509102 NABP1Q96AH0 204 aa16.04■□□□□ 0.16
UBE3D-207ENST00000509102 C7orf34Q96L11 122 aa16.04■□□□□ 0.16
UBE3D-207ENST00000509102 WACQ9BTA9 647 aa16.04■□□□□ 0.16
UBE3D-207ENST00000509102 OR51B6Q9H340 312 aa16.04■□□□□ 0.16
UBE3D-207ENST00000509102 ARL8BQ9NVJ2 186 aa16.04■□□□□ 0.16
UBE3D-207ENST00000509102 SLCO1C1Q9NYB5 712 aa16.04■□□□□ 0.16
UBE3D-207ENST00000509102 TIMM10BQ9Y5J6 103 aa16.04■□□□□ 0.16
UBE3D-207ENST00000509102 JMJD1CQ15652 2540 aa16.04■□□□□ 0.16
UBE3D-207ENST00000509102 ARPC2O15144 300 aa16.03■□□□□ 0.16
UBE3D-207ENST00000509102 GADD45GO95257 159 aa16.03■□□□□ 0.16
UBE3D-207ENST00000509102 STAMBPO95630 424 aa16.03■□□□□ 0.16
UBE3D-207ENST00000509102 FABP3P05413 133 aa16.03■□□□□ 0.16
UBE3D-207ENST00000509102 LAP3P28838 519 aa16.03■□□□□ 0.16
UBE3D-207ENST00000509102 SDHAP31040 664 aa16.03■□□□□ 0.16
UBE3D-207ENST00000509102 IFNGR2P38484 337 aa16.03■□□□□ 0.16
UBE3D-207ENST00000509102 ALDH3B1P43353 468 aa16.03■□□□□ 0.16
UBE3D-207ENST00000509102 SPIBQ01892 262 aa16.03■□□□□ 0.16
UBE3D-207ENST00000509102 ARL9Q6T311 187 aa16.03■□□□□ 0.16
UBE3D-207ENST00000509102 C1orf174Q8IYL3 243 aa16.03■□□□□ 0.16
UBE3D-207ENST00000509102 FAM86B1Q8N7N1 296 aa16.03■□□□□ 0.16
UBE3D-207ENST00000509102 CLDN22Q8N7P3 220 aa16.03■□□□□ 0.16
UBE3D-207ENST00000509102 RSRC1Q96IZ7 334 aaKnown RBP16.03■□□□□ 0.16
UBE3D-207ENST00000509102 BPESC1Q9GZL8 116 aa16.03■□□□□ 0.16
UBE3D-207ENST00000509102 ADAM21Q9UKJ8 722 aa16.03■□□□□ 0.16
UBE3D-207ENST00000509102 TMCC3Q9ULS5 477 aa16.03■□□□□ 0.16
UBE3D-207ENST00000509102 ADAM18Q9Y3Q7 739 aa16.03■□□□□ 0.16
UBE3D-207ENST00000509102 IGKV1D-43A0A0B4J1Z2 117 aa16.02■□□□□ 0.16
UBE3D-207ENST00000509102 PRSS37A4D1T9 235 aa16.02■□□□□ 0.16
UBE3D-207ENST00000509102 C5orf49A4QMS7 147 aa16.02■□□□□ 0.16
UBE3D-207ENST00000509102 UNC119BA6NIH7 251 aa16.02■□□□□ 0.16
UBE3D-207ENST00000509102 H7C1C5 153 aa16.02■□□□□ 0.16
UBE3D-207ENST00000509102 DIRAS1O95057 198 aa16.02■□□□□ 0.16
UBE3D-207ENST00000509102 GIFP27352 417 aa16.02■□□□□ 0.16
UBE3D-207ENST00000509102 GCH1P30793 250 aa16.02■□□□□ 0.16
UBE3D-207ENST00000509102 RPS6KA3P51812 740 aa16.02■□□□□ 0.16
UBE3D-207ENST00000509102 CHN2P52757 468 aa16.02■□□□□ 0.16
UBE3D-207ENST00000509102 LCN6P62502 163 aa16.02■□□□□ 0.16
UBE3D-207ENST00000509102 KRR1Q13601 381 aaKnown RBP16.02■□□□□ 0.16
UBE3D-207ENST00000509102 FHL1Q13642 323 aa16.02■□□□□ 0.16
UBE3D-207ENST00000509102 CHRFAM7AQ494W8 412 aa16.02■□□□□ 0.16
UBE3D-207ENST00000509102 TMEM154Q6P9G4 183 aa16.02■□□□□ 0.16
UBE3D-207ENST00000509102 TSEN54Q7Z6J9 526 aaKnown RBP16.02■□□□□ 0.16
UBE3D-207ENST00000509102 SYT9Q86SS6 491 aa16.02■□□□□ 0.16
UBE3D-207ENST00000509102 ADCK1Q86TW2 530 aa16.02■□□□□ 0.16
UBE3D-207ENST00000509102 LRP11Q86VZ4 500 aa16.02■□□□□ 0.16
UBE3D-207ENST00000509102 PAQR4Q8N4S7 273 aaPredicted RBP16.02■□□□□ 0.16
UBE3D-207ENST00000509102 CPEB3Q8NE35 698 aaKnown RBP16.02■□□□□ 0.16
UBE3D-207ENST00000509102 OR1J1Q8NGS3 322 aa16.02■□□□□ 0.16
UBE3D-207ENST00000509102 Q96M85 177 aa16.02■□□□□ 0.16
UBE3D-207ENST00000509102 TAAR3PQ9P1P4 343 aa16.02■□□□□ 0.16
UBE3D-207ENST00000509102 CD300AQ9UGN4 299 aa16.02■□□□□ 0.16
UBE3D-207ENST00000509102 CDC42EP3Q9UKI2 254 aa16.02■□□□□ 0.16
UBE3D-207ENST00000509102 SIGLEC7Q9Y286 467 aa16.02■□□□□ 0.16
UBE3D-207ENST00000509102 SONP18583 2426 aaKnown RBP16.02■□□□□ 0.15
UBE3D-207ENST00000509102 TEX13CA0A0J9YWL9 993 aa16.01■□□□□ 0.15
UBE3D-207ENST00000509102 TRBV4-1A0A0J9YWV2 114 aa16.01■□□□□ 0.15
UBE3D-207ENST00000509102 IFNA2P01563 188 aa16.01■□□□□ 0.15
UBE3D-207ENST00000509102 IGHV4-31P0DP07 118 aa16.01■□□□□ 0.15
UBE3D-207ENST00000509102 ZNF250P15622 560 aa16.01■□□□□ 0.15
UBE3D-207ENST00000509102 ZNF23P17027 643 aa16.01■□□□□ 0.15
UBE3D-207ENST00000509102 MSX2P35548 267 aaPredicted RBP16.01■□□□□ 0.15
UBE3D-207ENST00000509102 OMPP47874 163 aa16.01■□□□□ 0.15
UBE3D-207ENST00000509102 LIMS1P48059 325 aa16.01■□□□□ 0.15
UBE3D-207ENST00000509102 PSG4Q00888 419 aa16.01■□□□□ 0.15
UBE3D-207ENST00000509102 SCRN3Q0VDG4 424 aa16.01■□□□□ 0.15
UBE3D-207ENST00000509102 MAD2L1BPQ15013 274 aaPredicted RBP16.01■□□□□ 0.15
UBE3D-207ENST00000509102 MSMPQ1L6U9 139 aa16.01■□□□□ 0.15
UBE3D-207ENST00000509102 PCGF3Q3KNV8 242 aa16.01■□□□□ 0.15
UBE3D-207ENST00000509102 MESTQ5EB52 335 aa16.01■□□□□ 0.15
UBE3D-207ENST00000509102 FAM166AQ6J272 317 aa16.01■□□□□ 0.15
UBE3D-207ENST00000509102 DPY19L2P2Q6ZN68 376 aa16.01■□□□□ 0.15
UBE3D-207ENST00000509102 FOXL2NBQ6ZUU3 175 aa16.01■□□□□ 0.15
UBE3D-207ENST00000509102 HIPK1Q86Z02 1210 aa16.01■□□□□ 0.15
UBE3D-207ENST00000509102 AKR7LQ8NHP1 331 aa16.01■□□□□ 0.15
UBE3D-207ENST00000509102 DHRS1Q96LJ7 313 aa16.01■□□□□ 0.15
UBE3D-207ENST00000509102 CCT8L2Q96SF2 557 aa16.01■□□□□ 0.15
UBE3D-207ENST00000509102 GPX7Q96SL4 187 aaPredicted RBP16.01■□□□□ 0.15
UBE3D-207ENST00000509102 OR2H1Q9GZK4 316 aa16.01■□□□□ 0.15
UBE3D-207ENST00000509102 POLE4Q9NR33 117 aa16.01■□□□□ 0.15
UBE3D-207ENST00000509102 NDRG4Q9ULP0 352 aaKnown RBP16.01■□□□□ 0.15
UBE3D-207ENST00000509102 KCNS2Q9ULS6 477 aa16.01■□□□□ 0.15
UBE3D-207ENST00000509102 IGHV4-61A0A0C4DH41 118 aa16■□□□□ 0.15
UBE3D-207ENST00000509102 DYNC1I1O14576 645 aa16■□□□□ 0.15
UBE3D-207ENST00000509102 OR10H3O60404 316 aa16■□□□□ 0.15
UBE3D-207ENST00000509102 PTP4A3O75365 173 aa16■□□□□ 0.15
UBE3D-207ENST00000509102 NAT2P11245 290 aa16■□□□□ 0.15
UBE3D-207ENST00000509102 ZNF16P17020 682 aaPredicted RBP16■□□□□ 0.15
UBE3D-207ENST00000509102 ARHGDIAP52565 204 aa16■□□□□ 0.15
UBE3D-207ENST00000509102 ZNF718Q3SXZ3 478 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms