RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 FOXG1P55316 489 aaPredicted RBP8.97□□□□□ -0.97
HTT-204ENST00000508321 SNRPGP62308 76 aaKnown RBP8.97□□□□□ -0.97
HTT-204ENST00000508321 TEKQ02763 1124 aa8.97□□□□□ -0.97
HTT-204ENST00000508321 HSF2Q03933 536 aa8.97□□□□□ -0.97
HTT-204ENST00000508321 SCRN3Q0VDG4 424 aa8.97□□□□□ -0.97
HTT-204ENST00000508321 AQP6Q13520 282 aa8.97□□□□□ -0.97
HTT-204ENST00000508321 TAB1Q15750 504 aa8.97□□□□□ -0.97
HTT-204ENST00000508321 GSG1Q2KHT4 349 aa8.97□□□□□ -0.97
HTT-204ENST00000508321 ZIK1Q3SY52 487 aaPredicted RBP8.97□□□□□ -0.97
HTT-204ENST00000508321 HIKESHIQ53FT3 197 aa8.97□□□□□ -0.97
HTT-204ENST00000508321 TMEM236Q5W0B7 351 aa8.97□□□□□ -0.97
HTT-204ENST00000508321 TMEM53Q6P2H8 277 aa8.97□□□□□ -0.97
HTT-204ENST00000508321 PLBD1Q6P4A8 553 aa8.97□□□□□ -0.97
HTT-204ENST00000508321 MEX3BQ6ZN04 569 aaKnown RBP8.97□□□□□ -0.97
HTT-204ENST00000508321 SLC16A14Q7RTX9 510 aa8.97□□□□□ -0.97
HTT-204ENST00000508321 DHRSXQ8N5I4 330 aa8.97□□□□□ -0.97
HTT-204ENST00000508321 OR10H5Q8NGA6 315 aa8.97□□□□□ -0.97
HTT-204ENST00000508321 NRG4Q8WWG1 115 aa8.97□□□□□ -0.97
HTT-204ENST00000508321 ZNF837Q96EG3 531 aaPredicted RBP8.97□□□□□ -0.97
HTT-204ENST00000508321 SEC61A2Q9H9S3 476 aa8.97□□□□□ -0.97
HTT-204ENST00000508321 FAM118AQ9NWS6 357 aa8.97□□□□□ -0.97
HTT-204ENST00000508321 CRNNQ9UBG3 495 aaPredicted RBP8.97□□□□□ -0.97
HTT-204ENST00000508321 ATPIF1Q9UII2 106 aa8.97□□□□□ -0.97
HTT-204ENST00000508321 COA3Q9Y2R0 106 aaPredicted RBP8.97□□□□□ -0.97
HTT-204ENST00000508321 POLR1DQ9Y2S0 133 aa8.97□□□□□ -0.97
HTT-204ENST00000508321 SLC25A15Q9Y619 301 aa8.97□□□□□ -0.97
HTT-204ENST00000508321 A0A096LPE4 126 aa8.96□□□□□ -0.98
HTT-204ENST00000508321 A0A1W2PPZ6 126 aa8.96□□□□□ -0.98
HTT-204ENST00000508321 A1L4Q6 167 aa8.96□□□□□ -0.98
HTT-204ENST00000508321 C19orf84I3L1E1 186 aa8.96□□□□□ -0.98
HTT-204ENST00000508321 DCTN6O00399 190 aa8.96□□□□□ -0.98
HTT-204ENST00000508321 CASKO14936 926 aa8.96□□□□□ -0.98
HTT-204ENST00000508321 TLX2O43763 284 aaPredicted RBP8.96□□□□□ -0.98
HTT-204ENST00000508321 PRKYO43930 277 aa8.96□□□□□ -0.98
HTT-204ENST00000508321 TMCC2O75069 709 aa8.96□□□□□ -0.98
HTT-204ENST00000508321 PTHP01270 115 aa8.96□□□□□ -0.98
HTT-204ENST00000508321 IGKV3-15P01624 115 aa8.96□□□□□ -0.98
HTT-204ENST00000508321 HLA-DQA2P01906 255 aa8.96□□□□□ -0.98
HTT-204ENST00000508321 SLC2A5P22732 501 aa8.96□□□□□ -0.98
HTT-204ENST00000508321 FMO3P31513 532 aa8.96□□□□□ -0.98
HTT-204ENST00000508321 POLR2IP36954 125 aaKnown RBP8.96□□□□□ -0.98
HTT-204ENST00000508321 CAPZA2P47755 286 aa8.96□□□□□ -0.98
HTT-204ENST00000508321 EFNB1P98172 346 aa8.96□□□□□ -0.98
HTT-204ENST00000508321 POU4F2Q12837 409 aa8.96□□□□□ -0.98
HTT-204ENST00000508321 GGTLC2Q14390 218 aa8.96□□□□□ -0.98
HTT-204ENST00000508321 TSC22D1Q15714 1073 aa8.96□□□□□ -0.98
HTT-204ENST00000508321 SNCBQ16143 134 aa8.96□□□□□ -0.98
HTT-204ENST00000508321 BEX5Q5H9J7 111 aa8.96□□□□□ -0.98
HTT-204ENST00000508321 TMEM108Q6UXF1 575 aa8.96□□□□□ -0.98
HTT-204ENST00000508321 CPOQ8IVL8 374 aa8.96□□□□□ -0.98
HTT-204ENST00000508321 TCEANCQ8N8B7 351 aa8.96□□□□□ -0.98
HTT-204ENST00000508321 WDR31Q8NA23 367 aa8.96□□□□□ -0.98
HTT-204ENST00000508321 OR9Q1Q8NGQ5 310 aa8.96□□□□□ -0.98
HTT-204ENST00000508321 OR6K6Q8NGW6 343 aa8.96□□□□□ -0.98
HTT-204ENST00000508321 OR52N5Q8NH56 324 aa8.96□□□□□ -0.98
HTT-204ENST00000508321 CYGBQ8WWM9 190 aa8.96□□□□□ -0.98
HTT-204ENST00000508321 IPCEF1Q8WWN9 437 aaPredicted RBP8.96□□□□□ -0.98
HTT-204ENST00000508321 Q96MT0 163 aa8.96□□□□□ -0.98
HTT-204ENST00000508321 TSSK2Q96PF2 358 aa8.96□□□□□ -0.98
HTT-204ENST00000508321 RERGLQ9H628 205 aa8.96□□□□□ -0.98
HTT-204ENST00000508321 MARCH7Q9H992 704 aa8.96□□□□□ -0.98
HTT-204ENST00000508321 CCNB1IP1Q9NPC3 277 aa8.96□□□□□ -0.98
HTT-204ENST00000508321 HAO2Q9NYQ3 351 aa8.96□□□□□ -0.98
HTT-204ENST00000508321 H2AFY2Q9P0M6 372 aaPredicted RBP8.96□□□□□ -0.98
HTT-204ENST00000508321 PLEKHB1Q9UF11 243 aaPredicted RBP8.96□□□□□ -0.98
HTT-204ENST00000508321 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.96□□□□□ -0.98
HTT-204ENST00000508321 COMMD3-BMI1R4GMX3 469 aa8.96□□□□□ -0.98
HTT-204ENST00000508321 PKDREJQ9NTG1 2253 aa8.95□□□□□ -0.98
HTT-204ENST00000508321 FAM183AA6NL82 134 aa8.95□□□□□ -0.98
HTT-204ENST00000508321 SEC14L2O76054 403 aa8.95□□□□□ -0.98
HTT-204ENST00000508321 IGLV1-44P01699 117 aa8.95□□□□□ -0.98
HTT-204ENST00000508321 CBR1P16152 277 aa8.95□□□□□ -0.98
HTT-204ENST00000508321 ZNF823P16415 610 aa8.95□□□□□ -0.98
HTT-204ENST00000508321 PTAFRP25105 342 aa8.95□□□□□ -0.98
HTT-204ENST00000508321 CDAP32320 146 aa8.95□□□□□ -0.98
HTT-204ENST00000508321 ENTPD1P49961 510 aa8.95□□□□□ -0.98
HTT-204ENST00000508321 AQP4P55087 323 aa8.95□□□□□ -0.98
HTT-204ENST00000508321 CDH11P55287 796 aa8.95□□□□□ -0.98
HTT-204ENST00000508321 RPS7P62081 194 aaKnown RBP8.95□□□□□ -0.98
HTT-204ENST00000508321 ADAM8P78325 824 aa8.95□□□□□ -0.98
HTT-204ENST00000508321 ADARB1P78563 741 aaKnown RBP8.95□□□□□ -0.98
HTT-204ENST00000508321 DAZAP2Q15038 168 aaPredicted RBP8.95□□□□□ -0.98
HTT-204ENST00000508321 ETFDHQ16134 617 aa8.95□□□□□ -0.98
HTT-204ENST00000508321 SGCAQ16586 387 aa8.95□□□□□ -0.98
HTT-204ENST00000508321 OCLNQ16625 522 aa8.95□□□□□ -0.98
HTT-204ENST00000508321 PCK2Q16822 640 aa8.95□□□□□ -0.98
HTT-204ENST00000508321 KLHL12Q53G59 568 aa8.95□□□□□ -0.98
HTT-204ENST00000508321 TEX30Q5JUR7 227 aa8.95□□□□□ -0.98
HTT-204ENST00000508321 LINC01590Q5TEZ4 76 aa8.95□□□□□ -0.98
HTT-204ENST00000508321 AADACL4Q5VUY2 407 aa8.95□□□□□ -0.98
HTT-204ENST00000508321 ZNF691Q5VV52 312 aa8.95□□□□□ -0.98
HTT-204ENST00000508321 SEZ6L2Q6UXD5 910 aa8.95□□□□□ -0.98
HTT-204ENST00000508321 IZUMO2Q6UXV1 221 aa8.95□□□□□ -0.98
HTT-204ENST00000508321 SKA3Q8IX90 412 aa8.95□□□□□ -0.98
HTT-204ENST00000508321 ZNF454Q8N9F8 522 aa8.95□□□□□ -0.98
HTT-204ENST00000508321 IL17RDQ8NFM7 739 aa8.95□□□□□ -0.98
HTT-204ENST00000508321 C11orf40Q8WZ69 217 aa8.95□□□□□ -0.98
HTT-204ENST00000508321 TFAP2CQ92754 450 aa8.95□□□□□ -0.98
HTT-204ENST00000508321 PTP4A1Q93096 173 aa8.95□□□□□ -0.98
HTT-204ENST00000508321 OTULINQ96BN8 352 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms