RNA–Protein interactions for RNA: ENST00000508312.5

DDR1-262, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene DDR1, Length 3,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-262ENST00000508312 CTNSO60931 367 aa11.53□□□□□ -0.56
DDR1-262ENST00000508312 ZFPL1O95159 310 aa11.53□□□□□ -0.56
DDR1-262ENST00000508312 IGFALSP35858 605 aa11.53□□□□□ -0.56
DDR1-262ENST00000508312 EFNB2P52799 333 aa11.53□□□□□ -0.56
DDR1-262ENST00000508312 DEFB110Q30KQ9 67 aa11.53□□□□□ -0.56
DDR1-262ENST00000508312 STAC2Q6ZMT1 411 aa11.53□□□□□ -0.56
DDR1-262ENST00000508312 MTSS1LQ765P7 747 aa11.53□□□□□ -0.56
DDR1-262ENST00000508312 ZNF627Q7L945 461 aa11.53□□□□□ -0.56
DDR1-262ENST00000508312 FAM24BQ8N5W8 94 aa11.53□□□□□ -0.56
DDR1-262ENST00000508312 OR7G2Q8NG99 324 aa11.53□□□□□ -0.56
DDR1-262ENST00000508312 GTF3AQ92664 365 aaKnown RBP11.53□□□□□ -0.56
DDR1-262ENST00000508312 SLC35A4Q96G79 324 aa11.53□□□□□ -0.56
DDR1-262ENST00000508312 CLDND1Q9NY35 253 aa11.53□□□□□ -0.56
DDR1-262ENST00000508312 TREM2Q9NZC2 230 aa11.53□□□□□ -0.56
DDR1-262ENST00000508312 CXorf65A6NEN9 183 aa11.53□□□□□ -0.56
DDR1-262ENST00000508312 EPOPA6NHQ4 379 aa11.53□□□□□ -0.56
DDR1-262ENST00000508312 RNASEK-C17orf49H0YIS7 233 aa11.53□□□□□ -0.56
DDR1-262ENST00000508312 CSNK2A2P19784 350 aaPredicted RBP11.53□□□□□ -0.56
DDR1-262ENST00000508312 S100A2P29034 98 aa11.53□□□□□ -0.56
DDR1-262ENST00000508312 RIDAP52758 137 aaKnown RBP11.53□□□□□ -0.56
DDR1-262ENST00000508312 TDGQ13569 410 aa11.53□□□□□ -0.56
DDR1-262ENST00000508312 PON3Q15166 354 aa11.53□□□□□ -0.56
DDR1-262ENST00000508312 TMEM52BQ4KMG9 183 aa11.53□□□□□ -0.56
DDR1-262ENST00000508312 WDR88Q6ZMY6 472 aa11.53□□□□□ -0.56
DDR1-262ENST00000508312 FAM219AQ8IW50 185 aa11.53□□□□□ -0.56
DDR1-262ENST00000508312 YAF2Q8IY57 180 aa11.53□□□□□ -0.56
DDR1-262ENST00000508312 OR2L3Q8NG85 312 aa11.53□□□□□ -0.56
DDR1-262ENST00000508312 OR4K14Q8NGD5 310 aa11.53□□□□□ -0.56
DDR1-262ENST00000508312 NECAB3Q96P71 396 aaPredicted RBP11.53□□□□□ -0.56
DDR1-262ENST00000508312 POTEKPQ9BYX7 375 aa11.53□□□□□ -0.56
DDR1-262ENST00000508312 SFXN1Q9H9B4 322 aa11.53□□□□□ -0.56
DDR1-262ENST00000508312 PRDM7Q9NQW5 492 aa11.53□□□□□ -0.56
DDR1-262ENST00000508312 STEAP1Q9UHE8 339 aa11.53□□□□□ -0.56
DDR1-262ENST00000508312 ZNF281Q9Y2X9 895 aa11.53□□□□□ -0.56
DDR1-262ENST00000508312 WDR45Q9Y484 360 aa11.53□□□□□ -0.56
DDR1-262ENST00000508312 AP4M1O00189 453 aa11.52□□□□□ -0.56
DDR1-262ENST00000508312 SERPINA5P05154 406 aa11.52□□□□□ -0.56
DDR1-262ENST00000508312 FCARP24071 287 aa11.52□□□□□ -0.56
DDR1-262ENST00000508312 TSPAN7P41732 249 aa11.52□□□□□ -0.56
DDR1-262ENST00000508312 EEF1A1P68104 462 aaKnown RBP11.52□□□□□ -0.56
DDR1-262ENST00000508312 EXOSC7Q15024 291 aaKnown RBP11.52□□□□□ -0.56
DDR1-262ENST00000508312 EEF1A1P5Q5VTE0 462 aa11.52□□□□□ -0.56
DDR1-262ENST00000508312 ZNF585AQ6P3V2 769 aa11.52□□□□□ -0.56
DDR1-262ENST00000508312 CD163Q86VB7 1156 aa11.52□□□□□ -0.56
DDR1-262ENST00000508312 OR4K17Q8NGC6 315 aa11.52□□□□□ -0.56
DDR1-262ENST00000508312 LCN9Q8WX39 176 aa11.52□□□□□ -0.56
DDR1-262ENST00000508312 MOAP1Q96BY2 351 aa11.52□□□□□ -0.56
DDR1-262ENST00000508312 RAB3CQ96E17 227 aa11.52□□□□□ -0.56
DDR1-262ENST00000508312 ZNF780BQ9Y6R6 833 aa11.52□□□□□ -0.56
DDR1-262ENST00000508312 KIF26AQ9ULI4 1882 aaPredicted RBP11.52□□□□□ -0.57
DDR1-262ENST00000508312 P2RX6O15547 441 aa11.52□□□□□ -0.57
DDR1-262ENST00000508312 IFNGP01579 166 aa11.52□□□□□ -0.57
DDR1-262ENST00000508312 MT-ND4LP03901 98 aa11.52□□□□□ -0.57
DDR1-262ENST00000508312 ARG1P05089 322 aa11.52□□□□□ -0.57
DDR1-262ENST00000508312 LAP3P28838 519 aa11.52□□□□□ -0.57
DDR1-262ENST00000508312 RBM34P42696 430 aaKnown RBP11.52□□□□□ -0.57
DDR1-262ENST00000508312 CASP6P55212 293 aa11.52□□□□□ -0.57
DDR1-262ENST00000508312 USF2Q15853 346 aaPredicted RBP11.52□□□□□ -0.57
DDR1-262ENST00000508312 CDNFQ49AH0 187 aa11.52□□□□□ -0.57
DDR1-262ENST00000508312 C10orf91Q5T1B1 145 aa11.52□□□□□ -0.57
DDR1-262ENST00000508312 ABHD17CQ6PCB6 329 aa11.52□□□□□ -0.57
DDR1-262ENST00000508312 ZNF227Q86WZ6 799 aa11.52□□□□□ -0.57
DDR1-262ENST00000508312 GABRG1Q8N1C3 465 aa11.52□□□□□ -0.57
DDR1-262ENST00000508312 PIK3IP1Q96FE7 263 aa11.52□□□□□ -0.57
DDR1-262ENST00000508312 TNFRSF13CQ96RJ3 184 aa11.52□□□□□ -0.57
DDR1-262ENST00000508312 LMF1Q96S06 567 aa11.52□□□□□ -0.57
DDR1-262ENST00000508312 ATG5Q9H1Y0 275 aa11.52□□□□□ -0.57
DDR1-262ENST00000508312 SEMA6CQ9H3T2 930 aa11.52□□□□□ -0.57
DDR1-262ENST00000508312 FN3KRPQ9HA64 309 aa11.52□□□□□ -0.57
DDR1-262ENST00000508312 CSAG2Q9Y5P2 127 aa11.52□□□□□ -0.57
DDR1-262ENST00000508312 KIAA1549LQ6ZVL6 1849 aa11.52□□□□□ -0.57
DDR1-262ENST00000508312 XRCC3O43542 346 aa11.51□□□□□ -0.57
DDR1-262ENST00000508312 HCRTR1O43613 425 aa11.51□□□□□ -0.57
DDR1-262ENST00000508312 HNRNPA1P09651 372 aaKnown RBP eCLIP11.51□□□□□ -0.57
DDR1-262ENST00000508312 CALCBP10092 127 aa11.51□□□□□ -0.57
DDR1-262ENST00000508312 FOLR2P14207 255 aa11.51□□□□□ -0.57
DDR1-262ENST00000508312 ZNF28P17035 718 aa11.51□□□□□ -0.57
DDR1-262ENST00000508312 ACTR1BP42025 376 aa11.51□□□□□ -0.57
DDR1-262ENST00000508312 C1orf53Q5VUE5 145 aa11.51□□□□□ -0.57
DDR1-262ENST00000508312 ADAMTSL4Q6UY14 1074 aa11.51□□□□□ -0.57
DDR1-262ENST00000508312 BEND4Q6ZU67 534 aa11.51□□□□□ -0.57
DDR1-262ENST00000508312 TAF8Q7Z7C8 310 aa11.51□□□□□ -0.57
DDR1-262ENST00000508312 RANBP3LQ86VV4 465 aaPredicted RBP11.51□□□□□ -0.57
DDR1-262ENST00000508312 GALNT16Q8N428 558 aa11.51□□□□□ -0.57
DDR1-262ENST00000508312 FOXRED1Q96CU9 486 aaPredicted RBP11.51□□□□□ -0.57
DDR1-262ENST00000508312 LURAP1Q96LR2 239 aa11.51□□□□□ -0.57
DDR1-262ENST00000508312 SEC61A2Q9H9S3 476 aa11.51□□□□□ -0.57
DDR1-262ENST00000508312 RNF122Q9H9V4 155 aa11.51□□□□□ -0.57
DDR1-262ENST00000508312 THAP10Q9P2Z0 257 aaPredicted RBP11.51□□□□□ -0.57
DDR1-262ENST00000508312 MED6O75586 246 aa11.51□□□□□ -0.57
DDR1-262ENST00000508312 CD8AP01732 235 aa11.51□□□□□ -0.57
DDR1-262ENST00000508312 LAMP2P13473 410 aa11.51□□□□□ -0.57
DDR1-262ENST00000508312 ADRA2CP18825 462 aa11.51□□□□□ -0.57
DDR1-262ENST00000508312 COL9A1P20849 921 aa11.51□□□□□ -0.57
DDR1-262ENST00000508312 NANOS3P60323 173 aaKnown RBP11.51□□□□□ -0.57
DDR1-262ENST00000508312 ILF3Q12906 894 aaKnown RBP eCLIP11.51□□□□□ -0.57
DDR1-262ENST00000508312 DUSP5Q16690 384 aa11.51□□□□□ -0.57
DDR1-262ENST00000508312 ARHGAP40Q5TG30 622 aa11.51□□□□□ -0.57
DDR1-262ENST00000508312 LIPNQ5VXI9 398 aa11.51□□□□□ -0.57
DDR1-262ENST00000508312 TTLL10Q6ZVT0 673 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms