RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 SMAD7O15105 426 aaKnown RBP17.15■□□□□ 0.34
SFXN1-209ENST00000508290 ARPC3O15145 178 aa17.15■□□□□ 0.34
SFXN1-209ENST00000508290 ZNF26P17031 533 aaPredicted RBP17.15■□□□□ 0.34
SFXN1-209ENST00000508290 TRAP1Q12931 704 aaKnown RBP17.15■□□□□ 0.34
SFXN1-209ENST00000508290 RFX4Q33E94 735 aa17.15■□□□□ 0.34
SFXN1-209ENST00000508290 MESTQ5EB52 335 aa17.15■□□□□ 0.34
SFXN1-209ENST00000508290 C1orf94Q6P1W5 598 aa17.15■□□□□ 0.34
SFXN1-209ENST00000508290 DNM1P34Q6PK57 102 aa17.15■□□□□ 0.34
SFXN1-209ENST00000508290 ZER1Q7Z7L7 766 aa17.15■□□□□ 0.34
SFXN1-209ENST00000508290 GNPDA2Q8TDQ7 276 aa17.15■□□□□ 0.34
SFXN1-209ENST00000508290 FAM168AQ92567 244 aa17.15■□□□□ 0.34
SFXN1-209ENST00000508290 SNX18Q96RF0 628 aa17.15■□□□□ 0.34
SFXN1-209ENST00000508290 VRK1Q99986 396 aaPredicted RBP17.15■□□□□ 0.34
SFXN1-209ENST00000508290 MS4A5Q9H3V2 200 aa17.15■□□□□ 0.34
SFXN1-209ENST00000508290 GSX1Q9H4S2 264 aaPredicted RBP17.15■□□□□ 0.34
SFXN1-209ENST00000508290 VSX1Q9NZR4 365 aaPredicted RBP17.15■□□□□ 0.34
SFXN1-209ENST00000508290 TIMM10BQ9Y5J6 103 aa17.15■□□□□ 0.34
SFXN1-209ENST00000508290 IGKV1D-43A0A0B4J1Z2 117 aa17.14■□□□□ 0.33
SFXN1-209ENST00000508290 TEX13CA0A0J9YWL9 993 aa17.14■□□□□ 0.33
SFXN1-209ENST00000508290 A0A1W2PPL8 197 aa17.14■□□□□ 0.33
SFXN1-209ENST00000508290 TCRBV5S2A0A599 114 aa17.14■□□□□ 0.33
SFXN1-209ENST00000508290 RNF223E7ERA6 249 aa17.14■□□□□ 0.33
SFXN1-209ENST00000508290 SYNGR3O43761 229 aa17.14■□□□□ 0.33
SFXN1-209ENST00000508290 IDH3BO43837 385 aa17.14■□□□□ 0.33
SFXN1-209ENST00000508290 CDAP32320 146 aa17.14■□□□□ 0.33
SFXN1-209ENST00000508290 GSSP48637 474 aa17.14■□□□□ 0.33
SFXN1-209ENST00000508290 TSPAN31Q12999 210 aa17.14■□□□□ 0.33
SFXN1-209ENST00000508290 PABPC1L2AQ5JQF8 200 aa17.14■□□□□ 0.33
SFXN1-209ENST00000508290 PGM2L1Q6PCE3 622 aa17.14■□□□□ 0.33
SFXN1-209ENST00000508290 SVOPLQ8N434 492 aa17.14■□□□□ 0.33
SFXN1-209ENST00000508290 ZNF540Q8NDQ6 660 aa17.14■□□□□ 0.33
SFXN1-209ENST00000508290 POLE4Q9NR33 117 aa17.14■□□□□ 0.33
SFXN1-209ENST00000508290 LYVE1Q9Y5Y7 322 aa17.14■□□□□ 0.33
SFXN1-209ENST00000508290 M0R233 179 aa17.13■□□□□ 0.33
SFXN1-209ENST00000508290 TNFRSF11BO00300 401 aa17.13■□□□□ 0.33
SFXN1-209ENST00000508290 LY6G6DO95868 133 aa17.13■□□□□ 0.33
SFXN1-209ENST00000508290 ZNF32P17041 273 aa17.13■□□□□ 0.33
SFXN1-209ENST00000508290 STOMP27105 288 aa17.13■□□□□ 0.33
SFXN1-209ENST00000508290 LAP3P28838 519 aa17.13■□□□□ 0.33
SFXN1-209ENST00000508290 CRABP1P29762 137 aa17.13■□□□□ 0.33
SFXN1-209ENST00000508290 PDLIM4P50479 330 aa17.13■□□□□ 0.33
SFXN1-209ENST00000508290 SCRN3Q0VDG4 424 aa17.13■□□□□ 0.33
SFXN1-209ENST00000508290 MOGQ16653 247 aa17.13■□□□□ 0.33
SFXN1-209ENST00000508290 ARL9Q6T311 187 aa17.13■□□□□ 0.33
SFXN1-209ENST00000508290 THSD4Q6ZMP0 1018 aa17.13■□□□□ 0.33
SFXN1-209ENST00000508290 GLB1L2Q8IW92 636 aa17.13■□□□□ 0.33
SFXN1-209ENST00000508290 CLDN22Q8N7P3 220 aa17.13■□□□□ 0.33
SFXN1-209ENST00000508290 SORCS2Q96PQ0 1159 aa17.13■□□□□ 0.33
SFXN1-209ENST00000508290 OR52D1Q9H346 318 aa17.13■□□□□ 0.33
SFXN1-209ENST00000508290 EIF3KQ9UBQ5 218 aaKnown RBP17.13■□□□□ 0.33
SFXN1-209ENST00000508290 NDRG4Q9ULP0 352 aaKnown RBP17.13■□□□□ 0.33
SFXN1-209ENST00000508290 IER3IP1Q9Y5U9 82 aa17.13■□□□□ 0.33
SFXN1-209ENST00000508290 SETD2Q9BYW2 2564 aaPredicted RBP17.13■□□□□ 0.33
SFXN1-209ENST00000508290 LOC390937A0A1W2PQ73 354 aa17.12■□□□□ 0.33
SFXN1-209ENST00000508290 TMEM129A0AVI4 362 aa17.12■□□□□ 0.33
SFXN1-209ENST00000508290 AQP12BA6NM10 295 aa17.12■□□□□ 0.33
SFXN1-209ENST00000508290 GYG2O15488 501 aa17.12■□□□□ 0.33
SFXN1-209ENST00000508290 ICMTO60725 284 aa17.12■□□□□ 0.33
SFXN1-209ENST00000508290 KHDRBS3O75525 346 aaKnown RBP17.12■□□□□ 0.33
SFXN1-209ENST00000508290 TP53P04637 393 aaPredicted RBP17.12■□□□□ 0.33
SFXN1-209ENST00000508290 RAP2AP10114 183 aa17.12■□□□□ 0.33
SFXN1-209ENST00000508290 COX5BP10606 129 aa17.12■□□□□ 0.33
SFXN1-209ENST00000508290 GDI2P50395 445 aaKnown RBP17.12■□□□□ 0.33
SFXN1-209ENST00000508290 UCP2P55851 309 aa17.12■□□□□ 0.33
SFXN1-209ENST00000508290 FXYD6P3P58550 94 aa17.12■□□□□ 0.33
SFXN1-209ENST00000508290 LSM6P62312 80 aaKnown RBP17.12■□□□□ 0.33
SFXN1-209ENST00000508290 RGS7BPQ6MZT1 257 aaPredicted RBP17.12■□□□□ 0.33
SFXN1-209ENST00000508290 AQP12AQ8IXF9 295 aa17.12■□□□□ 0.33
SFXN1-209ENST00000508290 ZNF525Q8N782 197 aa17.12■□□□□ 0.33
SFXN1-209ENST00000508290 C10orf105Q8TEF2 133 aa17.12■□□□□ 0.33
SFXN1-209ENST00000508290 C11orf40Q8WZ69 217 aa17.12■□□□□ 0.33
SFXN1-209ENST00000508290 HTRA1Q92743 480 aa17.12■□□□□ 0.33
SFXN1-209ENST00000508290 GPA33Q99795 319 aa17.12■□□□□ 0.33
SFXN1-209ENST00000508290 SMR3AQ99954 134 aa17.12■□□□□ 0.33
SFXN1-209ENST00000508290 THTPAQ9BU02 230 aa17.12■□□□□ 0.33
SFXN1-209ENST00000508290 OR2H1Q9GZK4 316 aa17.12■□□□□ 0.33
SFXN1-209ENST00000508290 SYT4Q9H2B2 425 aa17.12■□□□□ 0.33
SFXN1-209ENST00000508290 REEP1Q9H902 201 aa17.12■□□□□ 0.33
SFXN1-209ENST00000508290 NF1P21359 2839 aa17.12■□□□□ 0.33
SFXN1-209ENST00000508290 C2CD3Q4AC94 2353 aa17.11■□□□□ 0.33
SFXN1-209ENST00000508290 H3BSA7 217 aa17.11■□□□□ 0.33
SFXN1-209ENST00000508290 H7C1C5 153 aa17.11■□□□□ 0.33
SFXN1-209ENST00000508290 SOCS2O14508 198 aa17.11■□□□□ 0.33
SFXN1-209ENST00000508290 GPRIN2O60269 458 aa17.11■□□□□ 0.33
SFXN1-209ENST00000508290 CCNB2O95067 398 aa17.11■□□□□ 0.33
SFXN1-209ENST00000508290 TUBG1P23258 451 aa17.11■□□□□ 0.33
SFXN1-209ENST00000508290 APEX1P27695 318 aaKnown RBP17.11■□□□□ 0.33
SFXN1-209ENST00000508290 LCN6P62502 163 aa17.11■□□□□ 0.33
SFXN1-209ENST00000508290 PSG4Q00888 419 aa17.11■□□□□ 0.33
SFXN1-209ENST00000508290 MS4A2Q01362 244 aa17.11■□□□□ 0.33
SFXN1-209ENST00000508290 LOXL1Q08397 574 aaPredicted RBP17.11■□□□□ 0.33
SFXN1-209ENST00000508290 OR2T5Q6IEZ7 315 aa17.11■□□□□ 0.33
SFXN1-209ENST00000508290 PGBD2Q6P3X8 592 aa17.11■□□□□ 0.33
SFXN1-209ENST00000508290 ZNF620Q6ZNG0 422 aa17.11■□□□□ 0.33
SFXN1-209ENST00000508290 JAZF1Q86VZ6 243 aa17.11■□□□□ 0.33
SFXN1-209ENST00000508290 OR52L1Q8NGH7 329 aa17.11■□□□□ 0.33
SFXN1-209ENST00000508290 OR2T29Q8NH02 315 aa17.11■□□□□ 0.33
SFXN1-209ENST00000508290 CCDC124Q96CT7 223 aaKnown RBP17.11■□□□□ 0.33
SFXN1-209ENST00000508290 RASD2Q96D21 266 aa17.11■□□□□ 0.33
SFXN1-209ENST00000508290 POM121L2Q96KW2 1035 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms