RNA–Protein interactions for RNA: ENST00000508169.1

COL6A4P1-204, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 3

Gene COL6A4P1, Length 527 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-204ENST00000508169 DNAJC3Q13217 504 aa4.87□□□□□ -1.63
COL6A4P1-204ENST00000508169 ELAVL3Q14576 367 aaKnown RBP4.87□□□□□ -1.63
COL6A4P1-204ENST00000508169 PSMD5Q16401 504 aa4.87□□□□□ -1.63
COL6A4P1-204ENST00000508169 AANATQ16613 207 aa4.87□□□□□ -1.63
COL6A4P1-204ENST00000508169 LRRC26Q2I0M4 334 aa4.87□□□□□ -1.63
COL6A4P1-204ENST00000508169 KLHL38Q2WGJ6 581 aa4.87□□□□□ -1.63
COL6A4P1-204ENST00000508169 TRIM16LQ309B1 348 aa4.87□□□□□ -1.63
COL6A4P1-204ENST00000508169 DNM1P46Q6ZS02 220 aa4.87□□□□□ -1.63
COL6A4P1-204ENST00000508169 TRPM8Q7Z2W7 1104 aa4.87□□□□□ -1.63
COL6A4P1-204ENST00000508169 C17orf82Q86X59 251 aaPredicted RBP4.87□□□□□ -1.63
COL6A4P1-204ENST00000508169 ZNF679Q8IYX0 411 aa4.87□□□□□ -1.63
COL6A4P1-204ENST00000508169 DRAXINQ8NBI3 349 aaPredicted RBP4.87□□□□□ -1.63
COL6A4P1-204ENST00000508169 PYROXD1Q8WU10 500 aa4.87□□□□□ -1.63
COL6A4P1-204ENST00000508169 ANKRD49Q8WVL7 239 aa4.87□□□□□ -1.63
COL6A4P1-204ENST00000508169 TCTEX1D2Q8WW35 142 aa4.87□□□□□ -1.63
COL6A4P1-204ENST00000508169 NDRG1Q92597 394 aaKnown RBP4.87□□□□□ -1.63
COL6A4P1-204ENST00000508169 MRPS31Q92665 395 aaKnown RBP4.87□□□□□ -1.63
COL6A4P1-204ENST00000508169 SLC41A3Q96GZ6 507 aa4.87□□□□□ -1.63
COL6A4P1-204ENST00000508169 COQ2Q96H96 371 aa4.87□□□□□ -1.63
COL6A4P1-204ENST00000508169 CYTH2Q99418 400 aa4.87□□□□□ -1.63
COL6A4P1-204ENST00000508169 LRRN3Q9H3W5 708 aa4.87□□□□□ -1.63
COL6A4P1-204ENST00000508169 ZNF702PQ9H963 129 aa4.87□□□□□ -1.63
COL6A4P1-204ENST00000508169 LRRC40Q9H9A6 602 aa4.87□□□□□ -1.63
COL6A4P1-204ENST00000508169 ETNK2Q9NVF9 386 aa4.87□□□□□ -1.63
COL6A4P1-204ENST00000508169 UXTQ9UBK9 157 aaPredicted RBP4.87□□□□□ -1.63
COL6A4P1-204ENST00000508169 GGA2Q9UJY4 613 aa4.87□□□□□ -1.63
COL6A4P1-204ENST00000508169 CA5BQ9Y2D0 317 aa4.87□□□□□ -1.63
COL6A4P1-204ENST00000508169 HEY1Q9Y5J3 304 aa4.87□□□□□ -1.63
COL6A4P1-204ENST00000508169 SMAD5-AS1Q9Y6J3 95 aa4.87□□□□□ -1.63
COL6A4P1-204ENST00000508169 ZNF638Q14966 1978 aaKnown RBP4.87□□□□□ -1.63
COL6A4P1-204ENST00000508169 DOCK4Q8N1I0 1966 aa4.87□□□□□ -1.63
COL6A4P1-204ENST00000508169 NUP205Q92621 2012 aa4.87□□□□□ -1.63
COL6A4P1-204ENST00000508169 CHD5Q8TDI0 1954 aa4.86□□□□□ -1.63
COL6A4P1-204ENST00000508169 MYO18AQ92614 2054 aaKnown RBP4.86□□□□□ -1.63
COL6A4P1-204ENST00000508169 C5orf67F2Z3F1 127 aa4.86□□□□□ -1.63
COL6A4P1-204ENST00000508169 RGS16O15492 202 aaPredicted RBP4.86□□□□□ -1.63
COL6A4P1-204ENST00000508169 ZNF208O43345 1280 aa4.86□□□□□ -1.63
COL6A4P1-204ENST00000508169 LYPLA1O75608 230 aaPredicted RBP4.86□□□□□ -1.63
COL6A4P1-204ENST00000508169 APOEP02649 317 aa4.86□□□□□ -1.63
COL6A4P1-204ENST00000508169 C1QAP02745 245 aa4.86□□□□□ -1.63
COL6A4P1-204ENST00000508169 OR4Q2P0C623 313 aa4.86□□□□□ -1.63
COL6A4P1-204ENST00000508169 OR8U8P0C7N1 319 aa4.86□□□□□ -1.63
COL6A4P1-204ENST00000508169 P0C879 139 aa4.86□□□□□ -1.63
COL6A4P1-204ENST00000508169 HSMCR30P0CW71 290 aa4.86□□□□□ -1.63
COL6A4P1-204ENST00000508169 DBTP11182 482 aaKnown RBP4.86□□□□□ -1.63
COL6A4P1-204ENST00000508169 HMGA1P17096 107 aaKnown RBP4.86□□□□□ -1.63
COL6A4P1-204ENST00000508169 ATF6P18850 670 aa4.86□□□□□ -1.63
COL6A4P1-204ENST00000508169 PCMT1P22061 227 aa4.86□□□□□ -1.63
COL6A4P1-204ENST00000508169 ATP5C1P36542 298 aaKnown RBP4.86□□□□□ -1.63
COL6A4P1-204ENST00000508169 LEPP41159 167 aa4.86□□□□□ -1.63
COL6A4P1-204ENST00000508169 OR3A4PP47883 348 aa4.86□□□□□ -1.63
COL6A4P1-204ENST00000508169 GPX6P59796 221 aa4.86□□□□□ -1.63
COL6A4P1-204ENST00000508169 IGLV3-21P80748 117 aaPredicted RBP4.86□□□□□ -1.63
COL6A4P1-204ENST00000508169 FGL1Q08830 312 aa4.86□□□□□ -1.63
COL6A4P1-204ENST00000508169 PDIA2Q13087 525 aaKnown RBP4.86□□□□□ -1.63
COL6A4P1-204ENST00000508169 PLD1Q13393 1074 aa4.86□□□□□ -1.63
COL6A4P1-204ENST00000508169 NAB1Q13506 487 aa4.86□□□□□ -1.63
COL6A4P1-204ENST00000508169 C1orf61Q13536 156 aa4.86□□□□□ -1.63
COL6A4P1-204ENST00000508169 TRIP13Q15645 432 aaPredicted RBP4.86□□□□□ -1.63
COL6A4P1-204ENST00000508169 LRRC36Q1X8D7 754 aa4.86□□□□□ -1.63
COL6A4P1-204ENST00000508169 KRT71Q3SY84 523 aa4.86□□□□□ -1.63
COL6A4P1-204ENST00000508169 PARP15Q460N3 678 aa4.86□□□□□ -1.63
COL6A4P1-204ENST00000508169 STEAP4Q687X5 459 aa4.86□□□□□ -1.63
COL6A4P1-204ENST00000508169 TTC19Q6DKK2 380 aaPredicted RBP4.86□□□□□ -1.63
COL6A4P1-204ENST00000508169 LRRC31Q6UY01 552 aa4.86□□□□□ -1.63
COL6A4P1-204ENST00000508169 TFAP2EQ6VUC0 442 aa4.86□□□□□ -1.63
COL6A4P1-204ENST00000508169 TIFABQ6ZNK6 161 aa4.86□□□□□ -1.63
COL6A4P1-204ENST00000508169 C3orf62Q6ZUJ4 267 aa4.86□□□□□ -1.63
COL6A4P1-204ENST00000508169 DEFB128Q7Z7B8 93 aa4.86□□□□□ -1.63
COL6A4P1-204ENST00000508169 LINC00523Q86TU6 105 aa4.86□□□□□ -1.63
COL6A4P1-204ENST00000508169 TMEM135Q86UB9 458 aa4.86□□□□□ -1.63
COL6A4P1-204ENST00000508169 PAQR8Q8TEZ7 354 aa4.86□□□□□ -1.63
COL6A4P1-204ENST00000508169 PEX13Q92968 403 aa4.86□□□□□ -1.63
COL6A4P1-204ENST00000508169 FBXO32Q969P5 355 aa4.86□□□□□ -1.63
COL6A4P1-204ENST00000508169 IL4I1Q96RQ9 567 aa4.86□□□□□ -1.63
COL6A4P1-204ENST00000508169 NPAS2Q99743 824 aa4.86□□□□□ -1.63
COL6A4P1-204ENST00000508169 EBNA1BP2Q99848 306 aaKnown RBP4.86□□□□□ -1.63
COL6A4P1-204ENST00000508169 CAPS2Q9BXY5 557 aa4.86□□□□□ -1.63
COL6A4P1-204ENST00000508169 GPATCH2LQ9NWQ4 482 aa4.86□□□□□ -1.63
COL6A4P1-204ENST00000508169 PHF11Q9UIL8 331 aa4.86□□□□□ -1.63
COL6A4P1-204ENST00000508169 TIMM10BQ9Y5J6 103 aa4.86□□□□□ -1.63
COL6A4P1-204ENST00000508169 BRCA2P51587 3418 aa4.86□□□□□ -1.63
COL6A4P1-204ENST00000508169 TRAV26-1A0A087WT03 109 aa4.85□□□□□ -1.63
COL6A4P1-204ENST00000508169 SYNJ2BP-COX16A0A087WUM0 186 aa4.85□□□□□ -1.63
COL6A4P1-204ENST00000508169 VSTM2BA6NLU5 285 aa4.85□□□□□ -1.63
COL6A4P1-204ENST00000508169 POLR3GO15318 223 aaPredicted RBP4.85□□□□□ -1.63
COL6A4P1-204ENST00000508169 MFSD11O43934 449 aa4.85□□□□□ -1.63
COL6A4P1-204ENST00000508169 AP2A1O95782 977 aa4.85□□□□□ -1.63
COL6A4P1-204ENST00000508169 LALBAP00709 142 aa4.85□□□□□ -1.63
COL6A4P1-204ENST00000508169 IGHV3-23P01764 117 aa4.85□□□□□ -1.63
COL6A4P1-204ENST00000508169 SHBGP04278 402 aa4.85□□□□□ -1.63
COL6A4P1-204ENST00000508169 CCNB1P14635 433 aa4.85□□□□□ -1.63
COL6A4P1-204ENST00000508169 POLR2EP19388 210 aaKnown RBP4.85□□□□□ -1.63
COL6A4P1-204ENST00000508169 GCAP28676 217 aa4.85□□□□□ -1.63
COL6A4P1-204ENST00000508169 NTSP30990 170 aa4.85□□□□□ -1.63
COL6A4P1-204ENST00000508169 HOXA9P31269 272 aa4.85□□□□□ -1.63
COL6A4P1-204ENST00000508169 GRIA1P42261 906 aa4.85□□□□□ -1.63
COL6A4P1-204ENST00000508169 DAP3P51398 398 aaKnown RBP4.85□□□□□ -1.63
COL6A4P1-204ENST00000508169 MNAT1P51948 309 aa4.85□□□□□ -1.63
COL6A4P1-204ENST00000508169 KRTAP10-6P60371 365 aaPredicted RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms