RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 STK35Q8TDR2 534 aa5.89□□□□□ -1.47
VCAN-207ENST00000507162 NPRL2Q8WTW4 380 aa5.89□□□□□ -1.47
VCAN-207ENST00000507162 MOAP1Q96BY2 351 aa5.89□□□□□ -1.47
VCAN-207ENST00000507162 ROPN1LQ96C74 230 aa5.89□□□□□ -1.47
VCAN-207ENST00000507162 SLC35G5Q96KT7 338 aa5.89□□□□□ -1.47
VCAN-207ENST00000507162 TMEM237Q96Q45 408 aa5.89□□□□□ -1.47
VCAN-207ENST00000507162 PRR25Q96S07 402 aa5.89□□□□□ -1.47
VCAN-207ENST00000507162 CCT7Q99832 543 aa5.89□□□□□ -1.47
VCAN-207ENST00000507162 SSX3Q99909 188 aa5.89□□□□□ -1.47
VCAN-207ENST00000507162 PCDHAC1Q9H158 963 aa5.89□□□□□ -1.47
VCAN-207ENST00000507162 RAB18Q9NP72 206 aa5.89□□□□□ -1.47
VCAN-207ENST00000507162 SERTAD4Q9NUC0 356 aa5.89□□□□□ -1.47
VCAN-207ENST00000507162 DUX4Q9UBX2 424 aa5.89□□□□□ -1.47
VCAN-207ENST00000507162 ZMAT5Q9UDW3 170 aaKnown RBP5.89□□□□□ -1.47
VCAN-207ENST00000507162 CGGBP1Q9UFW8 167 aaPredicted RBP5.89□□□□□ -1.47
VCAN-207ENST00000507162 TBK1Q9UHD2 729 aa5.89□□□□□ -1.47
VCAN-207ENST00000507162 HIF3AQ9Y2N7 669 aa5.89□□□□□ -1.47
VCAN-207ENST00000507162 JRKLQ9Y4A0 524 aa5.89□□□□□ -1.47
VCAN-207ENST00000507162 MAB21L2Q9Y586 359 aa5.89□□□□□ -1.47
VCAN-207ENST00000507162 TCRBV4S1A1TA0A5B7 111 aa5.88□□□□□ -1.47
VCAN-207ENST00000507162 LRRC30A6NM36 301 aa5.88□□□□□ -1.47
VCAN-207ENST00000507162 IFNL4K9M1U5 179 aa5.88□□□□□ -1.47
VCAN-207ENST00000507162 FAAHO00519 579 aa5.88□□□□□ -1.47
VCAN-207ENST00000507162 NPFFO15130 113 aa5.88□□□□□ -1.47
VCAN-207ENST00000507162 NPIPB7O75200 414 aa5.88□□□□□ -1.47
VCAN-207ENST00000507162 HPRP00739 348 aa5.88□□□□□ -1.47
VCAN-207ENST00000507162 IL7RP16871 459 aa5.88□□□□□ -1.47
VCAN-207ENST00000507162 IMPDH1P20839 514 aa5.88□□□□□ -1.47
VCAN-207ENST00000507162 GRPRP30550 384 aa5.88□□□□□ -1.47
VCAN-207ENST00000507162 HPCAL1P37235 193 aa5.88□□□□□ -1.47
VCAN-207ENST00000507162 NPY4RP50391 375 aa5.88□□□□□ -1.47
VCAN-207ENST00000507162 GDI2P50395 445 aaKnown RBP5.88□□□□□ -1.47
VCAN-207ENST00000507162 ZNF75DP51815 510 aa5.88□□□□□ -1.47
VCAN-207ENST00000507162 RPL38P63173 70 aaKnown RBP5.88□□□□□ -1.47
VCAN-207ENST00000507162 HPCAP84074 193 aa5.88□□□□□ -1.47
VCAN-207ENST00000507162 NAB1Q13506 487 aa5.88□□□□□ -1.47
VCAN-207ENST00000507162 GNA13Q14344 377 aa5.88□□□□□ -1.47
VCAN-207ENST00000507162 RFTN2Q52LD8 501 aaPredicted RBP5.88□□□□□ -1.47
VCAN-207ENST00000507162 PABPC1L2AQ5JQF8 200 aa5.88□□□□□ -1.47
VCAN-207ENST00000507162 LIPMQ5VYY2 423 aa5.88□□□□□ -1.47
VCAN-207ENST00000507162 KCTD18Q6PI47 426 aaPredicted RBP5.88□□□□□ -1.47
VCAN-207ENST00000507162 DCDC5Q6ZRR9 648 aa5.88□□□□□ -1.47
VCAN-207ENST00000507162 MOGAT3Q86VF5 341 aa5.88□□□□□ -1.47
VCAN-207ENST00000507162 PNKDQ8N490 385 aa5.88□□□□□ -1.47
VCAN-207ENST00000507162 OR5AU1Q8NGC0 362 aa5.88□□□□□ -1.47
VCAN-207ENST00000507162 AKR7LQ8NHP1 331 aa5.88□□□□□ -1.47
VCAN-207ENST00000507162 PSMA8Q8TAA3 256 aa5.88□□□□□ -1.47
VCAN-207ENST00000507162 VANGL1Q8TAA9 524 aaPredicted RBP5.88□□□□□ -1.47
VCAN-207ENST00000507162 SLC7A13Q8TCU3 470 aa5.88□□□□□ -1.47
VCAN-207ENST00000507162 C10orf82Q8WW14 230 aa5.88□□□□□ -1.47
VCAN-207ENST00000507162 RORBQ92753 470 aa5.88□□□□□ -1.47
VCAN-207ENST00000507162 TAAR8Q969N4 342 aa5.88□□□□□ -1.47
VCAN-207ENST00000507162 MTERF3Q96E29 417 aa5.88□□□□□ -1.47
VCAN-207ENST00000507162 PTDSS2Q9BVG9 487 aa5.88□□□□□ -1.47
VCAN-207ENST00000507162 FAM234AQ9H0X4 552 aa5.88□□□□□ -1.47
VCAN-207ENST00000507162 RANBP3Q9H6Z4 567 aaPredicted RBP5.88□□□□□ -1.47
VCAN-207ENST00000507162 SIRT7Q9NRC8 400 aa5.88□□□□□ -1.47
VCAN-207ENST00000507162 POLE3Q9NRF9 147 aa5.88□□□□□ -1.47
VCAN-207ENST00000507162 MAN2C1Q9NTJ4 1040 aa5.88□□□□□ -1.47
VCAN-207ENST00000507162 TMEM38BQ9NVV0 291 aa5.88□□□□□ -1.47
VCAN-207ENST00000507162 RLIMQ9NVW2 624 aa5.88□□□□□ -1.47
VCAN-207ENST00000507162 GLTPQ9NZD2 209 aa5.88□□□□□ -1.47
VCAN-207ENST00000507162 ONECUT1Q9UBC0 465 aa5.88□□□□□ -1.47
VCAN-207ENST00000507162 TRBV23-1A0A0A0MS06 115 aa5.87□□□□□ -1.47
VCAN-207ENST00000507162 KRTAP9-6A0A140TA67 174 aa5.87□□□□□ -1.47
VCAN-207ENST00000507162 LOC102725191A0A1B0GVB3 256 aa5.87□□□□□ -1.47
VCAN-207ENST00000507162 ELOVL7A1L3X0 281 aa5.87□□□□□ -1.47
VCAN-207ENST00000507162 H0YHG0 523 aa5.87□□□□□ -1.47
VCAN-207ENST00000507162 SLC28A1O00337 649 aa5.87□□□□□ -1.47
VCAN-207ENST00000507162 FBP2O00757 339 aa5.87□□□□□ -1.47
VCAN-207ENST00000507162 EIF3HO15372 352 aaKnown RBP eCLIP5.87□□□□□ -1.47
VCAN-207ENST00000507162 OR10H3O60404 316 aa5.87□□□□□ -1.47
VCAN-207ENST00000507162 AGR2O95994 175 aa5.87□□□□□ -1.47
VCAN-207ENST00000507162 ARRB2P32121 409 aa5.87□□□□□ -1.47
VCAN-207ENST00000507162 ARHGDIAP52565 204 aa5.87□□□□□ -1.47
VCAN-207ENST00000507162 BIDP55957 195 aa5.87□□□□□ -1.47
VCAN-207ENST00000507162 DLX1P56177 255 aa5.87□□□□□ -1.47
VCAN-207ENST00000507162 HBA1P69905 142 aa5.87□□□□□ -1.47
VCAN-207ENST00000507162 MRPS25P82663 173 aaKnown RBP5.87□□□□□ -1.47
VCAN-207ENST00000507162 CD83Q01151 205 aa5.87□□□□□ -1.47
VCAN-207ENST00000507162 C2orf54Q08AI8 447 aa5.87□□□□□ -1.47
VCAN-207ENST00000507162 TAF11Q15544 211 aa5.87□□□□□ -1.47
VCAN-207ENST00000507162 GALNTL6Q49A17 601 aa5.87□□□□□ -1.47
VCAN-207ENST00000507162 KHDC1LQ5JSQ8 128 aa5.87□□□□□ -1.47
VCAN-207ENST00000507162 MRPL2Q5T653 305 aaKnown RBP5.87□□□□□ -1.47
VCAN-207ENST00000507162 WDR88Q6ZMY6 472 aa5.87□□□□□ -1.47
VCAN-207ENST00000507162 LHFPL2Q6ZUX7 228 aa5.87□□□□□ -1.47
VCAN-207ENST00000507162 RFPL4BQ6ZWI9 263 aa5.87□□□□□ -1.47
VCAN-207ENST00000507162 BTN2A1Q7KYR7 527 aa5.87□□□□□ -1.47
VCAN-207ENST00000507162 DPPA2Q7Z7J5 298 aa5.87□□□□□ -1.47
VCAN-207ENST00000507162 SBSPONQ8IVN8 264 aa5.87□□□□□ -1.47
VCAN-207ENST00000507162 ZNF440Q8IYI8 595 aa5.87□□□□□ -1.47
VCAN-207ENST00000507162 C1orf87Q8N0U7 546 aa5.87□□□□□ -1.47
VCAN-207ENST00000507162 OR5AS1Q8N127 324 aa5.87□□□□□ -1.47
VCAN-207ENST00000507162 BOLLQ8N9W6 283 aaKnown RBP5.87□□□□□ -1.47
VCAN-207ENST00000507162 OR51G2Q8NGK0 314 aa5.87□□□□□ -1.47
VCAN-207ENST00000507162 OIT3Q8WWZ8 545 aa5.87□□□□□ -1.47
VCAN-207ENST00000507162 CMBLQ96DG6 245 aa5.87□□□□□ -1.47
VCAN-207ENST00000507162 MAELQ96JY0 434 aaKnown RBP5.87□□□□□ -1.47
VCAN-207ENST00000507162 POM121L2Q96KW2 1035 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms