RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 TRIM64A6NGJ6 449 aa11.06□□□□□ -0.64
HSPG2-213ENST00000498495 TRIM64BA6NI03 449 aa11.06□□□□□ -0.64
HSPG2-213ENST00000498495 H7C417 338 aa11.06□□□□□ -0.64
HSPG2-213ENST00000498495 ARPC3O15145 178 aa11.06□□□□□ -0.64
HSPG2-213ENST00000498495 SSX4O60224 188 aa11.06□□□□□ -0.64
HSPG2-213ENST00000498495 SLC16A7O60669 478 aa11.06□□□□□ -0.64
HSPG2-213ENST00000498495 CST2P09228 141 aa11.06□□□□□ -0.64
HSPG2-213ENST00000498495 CCL2P13500 99 aa11.06□□□□□ -0.64
HSPG2-213ENST00000498495 HOXB6P17509 224 aaKnown RBP11.06□□□□□ -0.64
HSPG2-213ENST00000498495 MSR1P21757 451 aa11.06□□□□□ -0.64
HSPG2-213ENST00000498495 APLNRP35414 380 aa11.06□□□□□ -0.64
HSPG2-213ENST00000498495 CDKN2AP42771 156 aaKnown RBP11.06□□□□□ -0.64
HSPG2-213ENST00000498495 NUDT6P53370 316 aa11.06□□□□□ -0.64
HSPG2-213ENST00000498495 EFNB3Q15768 340 aa11.06□□□□□ -0.64
HSPG2-213ENST00000498495 TBC1D28Q2M2D7 210 aa11.06□□□□□ -0.64
HSPG2-213ENST00000498495 PABPC1L2AQ5JQF8 200 aa11.06□□□□□ -0.64
HSPG2-213ENST00000498495 RPL13AP3Q6NVV1 102 aa11.06□□□□□ -0.64
HSPG2-213ENST00000498495 FOXL2NBQ6ZUU3 175 aa11.06□□□□□ -0.64
HSPG2-213ENST00000498495 ADCK1Q86TW2 530 aa11.06□□□□□ -0.64
HSPG2-213ENST00000498495 JAZF1Q86VZ6 243 aa11.06□□□□□ -0.64
HSPG2-213ENST00000498495 AQP11Q8NBQ7 271 aa11.06□□□□□ -0.64
HSPG2-213ENST00000498495 VRK1Q99986 396 aaPredicted RBP11.06□□□□□ -0.64
HSPG2-213ENST00000498495 CADM1Q9BY67 442 aaKnown RBP11.06□□□□□ -0.64
HSPG2-213ENST00000498495 PLK3Q9H4B4 646 aa11.06□□□□□ -0.64
HSPG2-213ENST00000498495 YY1AP1Q9H869 796 aa11.06□□□□□ -0.64
HSPG2-213ENST00000498495 POLE4Q9NR33 117 aa11.06□□□□□ -0.64
HSPG2-213ENST00000498495 VSX1Q9NZR4 365 aaPredicted RBP11.06□□□□□ -0.64
HSPG2-213ENST00000498495 SLC7A8Q9UHI5 535 aa11.06□□□□□ -0.64
HSPG2-213ENST00000498495 FBXO9Q9UK97 447 aaPredicted RBP11.06□□□□□ -0.64
HSPG2-213ENST00000498495 COA3Q9Y2R0 106 aaPredicted RBP11.06□□□□□ -0.64
HSPG2-213ENST00000498495 TIMM10BQ9Y5J6 103 aa11.06□□□□□ -0.64
HSPG2-213ENST00000498495 ARID1AO14497 2285 aa11.05□□□□□ -0.64
HSPG2-213ENST00000498495 C12orf71A8MTZ7 269 aa11.05□□□□□ -0.64
HSPG2-213ENST00000498495 H7C1Q1 480 aa11.05□□□□□ -0.64
HSPG2-213ENST00000498495 IDH3BO43837 385 aa11.05□□□□□ -0.64
HSPG2-213ENST00000498495 RENP00797 406 aa11.05□□□□□ -0.64
HSPG2-213ENST00000498495 INHBBP09529 407 aa11.05□□□□□ -0.64
HSPG2-213ENST00000498495 CTLA4P16410 223 aa11.05□□□□□ -0.64
HSPG2-213ENST00000498495 CCNOP22674 350 aa11.05□□□□□ -0.64
HSPG2-213ENST00000498495 STOMP27105 288 aa11.05□□□□□ -0.64
HSPG2-213ENST00000498495 APEX1P27695 318 aaKnown RBP11.05□□□□□ -0.64
HSPG2-213ENST00000498495 CRABP1P29762 137 aa11.05□□□□□ -0.64
HSPG2-213ENST00000498495 RAD52P43351 418 aa11.05□□□□□ -0.64
HSPG2-213ENST00000498495 CENPAP49450 140 aa11.05□□□□□ -0.64
HSPG2-213ENST00000498495 RPS23P62266 143 aaKnown RBP11.05□□□□□ -0.64
HSPG2-213ENST00000498495 PSG4Q00888 419 aa11.05□□□□□ -0.64
HSPG2-213ENST00000498495 GK3PQ14409 553 aa11.05□□□□□ -0.64
HSPG2-213ENST00000498495 ZNF770Q6IQ21 691 aaPredicted RBP11.05□□□□□ -0.64
HSPG2-213ENST00000498495 LEG1Q6P5S2 330 aa11.05□□□□□ -0.64
HSPG2-213ENST00000498495 DNM1P34Q6PK57 102 aa11.05□□□□□ -0.64
HSPG2-213ENST00000498495 ZNF620Q6ZNG0 422 aa11.05□□□□□ -0.64
HSPG2-213ENST00000498495 PTCHD4Q6ZW05 846 aa11.05□□□□□ -0.64
HSPG2-213ENST00000498495 SYT9Q86SS6 491 aa11.05□□□□□ -0.64
HSPG2-213ENST00000498495 CPEB3Q8NE35 698 aaKnown RBP11.05□□□□□ -0.64
HSPG2-213ENST00000498495 OR52L1Q8NGH7 329 aa11.05□□□□□ -0.64
HSPG2-213ENST00000498495 OR4K13Q8NH42 304 aa11.05□□□□□ -0.64
HSPG2-213ENST00000498495 AKR7LQ8NHP1 331 aa11.05□□□□□ -0.64
HSPG2-213ENST00000498495 FOXN4Q96NZ1 517 aa11.05□□□□□ -0.64
HSPG2-213ENST00000498495 DOK1Q99704 481 aa11.05□□□□□ -0.64
HSPG2-213ENST00000498495 WACQ9BTA9 647 aa11.05□□□□□ -0.64
HSPG2-213ENST00000498495 ZNF416Q9BWM5 594 aa11.05□□□□□ -0.64
HSPG2-213ENST00000498495 NUAK2Q9H093 628 aa11.05□□□□□ -0.64
HSPG2-213ENST00000498495 MMADHCQ9H3L0 296 aaPredicted RBP11.05□□□□□ -0.64
HSPG2-213ENST00000498495 EGLN3Q9H6Z9 239 aa11.05□□□□□ -0.64
HSPG2-213ENST00000498495 SRA1Q9HD15 236 aaKnown RBP11.05□□□□□ -0.64
HSPG2-213ENST00000498495 DLL4Q9NR61 685 aa11.05□□□□□ -0.64
HSPG2-213ENST00000498495 USF3Q68DE3 2245 aa11.05□□□□□ -0.64
HSPG2-213ENST00000498495 MED13LQ71F56 2210 aa11.04□□□□□ -0.64
HSPG2-213ENST00000498495 TMEM129A0AVI4 362 aa11.04□□□□□ -0.64
HSPG2-213ENST00000498495 SMAD7O15105 426 aaKnown RBP11.04□□□□□ -0.64
HSPG2-213ENST00000498495 F12P00748 615 aaPredicted RBP11.04□□□□□ -0.64
HSPG2-213ENST00000498495 SCG5P05408 212 aa11.04□□□□□ -0.64
HSPG2-213ENST00000498495 FAM157BP0CG42 384 aa11.04□□□□□ -0.64
HSPG2-213ENST00000498495 HIST1H1CP16403 213 aaKnown RBP11.04□□□□□ -0.64
HSPG2-213ENST00000498495 GSTM3P21266 225 aa11.04□□□□□ -0.64
HSPG2-213ENST00000498495 GDI2P50395 445 aaKnown RBP11.04□□□□□ -0.64
HSPG2-213ENST00000498495 EFNA4P52798 201 aa11.04□□□□□ -0.64
HSPG2-213ENST00000498495 TNK1Q13470 666 aa11.04□□□□□ -0.64
HSPG2-213ENST00000498495 CLEC12AQ5QGZ9 265 aa11.04□□□□□ -0.64
HSPG2-213ENST00000498495 SLC35F1Q5T1Q4 408 aa11.04□□□□□ -0.64
HSPG2-213ENST00000498495 RGS7BPQ6MZT1 257 aaPredicted RBP11.04□□□□□ -0.64
HSPG2-213ENST00000498495 UGT2A3Q6UWM9 527 aa11.04□□□□□ -0.64
HSPG2-213ENST00000498495 RASSF6Q6ZTQ3 369 aa11.04□□□□□ -0.64
HSPG2-213ENST00000498495 GLB1L2Q8IW92 636 aa11.04□□□□□ -0.64
HSPG2-213ENST00000498495 CIARTQ8N365 385 aaPredicted RBP11.04□□□□□ -0.64
HSPG2-213ENST00000498495 SVOPLQ8N434 492 aa11.04□□□□□ -0.64
HSPG2-213ENST00000498495 OR10G2Q8NGC3 310 aa11.04□□□□□ -0.64
HSPG2-213ENST00000498495 OR52E2Q8NGJ4 325 aa11.04□□□□□ -0.64
HSPG2-213ENST00000498495 GIPC3Q8TF64 312 aa11.04□□□□□ -0.64
HSPG2-213ENST00000498495 MRPL24Q96A35 216 aaKnown RBP11.04□□□□□ -0.64
HSPG2-213ENST00000498495 NMNAT3Q96T66 252 aa11.04□□□□□ -0.64
HSPG2-213ENST00000498495 RHNO1Q9BSD3 238 aa11.04□□□□□ -0.64
HSPG2-213ENST00000498495 OR2H1Q9GZK4 316 aa11.04□□□□□ -0.64
HSPG2-213ENST00000498495 RAB1BQ9H0U4 201 aa11.04□□□□□ -0.64
HSPG2-213ENST00000498495 EMC7Q9NPA0 242 aa11.04□□□□□ -0.64
HSPG2-213ENST00000498495 VNN3Q9NY84 501 aa11.04□□□□□ -0.64
HSPG2-213ENST00000498495 IL20Q9NYY1 176 aa11.04□□□□□ -0.64
HSPG2-213ENST00000498495 EIF3KQ9UBQ5 218 aaKnown RBP11.04□□□□□ -0.64
HSPG2-213ENST00000498495 B9D1Q9UPM9 204 aa11.04□□□□□ -0.64
HSPG2-213ENST00000498495 CDH10Q9Y6N8 788 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms