RNA–Protein interactions for RNA: ENST00000498280.1

RBM39-242, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-242ENST00000498280 GABARAPO95166 117 aa1.41□□□□□ -2.18
RBM39-242ENST00000498280 SERPINA5P05154 406 aa1.41□□□□□ -2.18
RBM39-242ENST00000498280 TROVE2P10155 538 aaKnown RBP eCLIP1.41□□□□□ -2.18
RBM39-242ENST00000498280 RPS2P15880 293 aaKnown RBP1.41□□□□□ -2.18
RBM39-242ENST00000498280 ZNF24P17028 368 aa1.41□□□□□ -2.18
RBM39-242ENST00000498280 PGAM1P18669 254 aa1.41□□□□□ -2.18
RBM39-242ENST00000498280 CEACAM6P40199 344 aa1.41□□□□□ -2.18
RBM39-242ENST00000498280 NAA10P41227 235 aaPredicted RBP1.41□□□□□ -2.18
RBM39-242ENST00000498280 MNAT1P51948 309 aa1.41□□□□□ -2.18
RBM39-242ENST00000498280 ZNF138P52744 262 aa1.41□□□□□ -2.18
RBM39-242ENST00000498280 MXD1Q05195 221 aa1.41□□□□□ -2.18
RBM39-242ENST00000498280 TGM3Q08188 693 aa1.41□□□□□ -2.18
RBM39-242ENST00000498280 LRRC74AQ0VAA2 488 aa1.41□□□□□ -2.18
RBM39-242ENST00000498280 TWF1Q12792 350 aa1.41□□□□□ -2.18
RBM39-242ENST00000498280 SRSF5Q13243 272 aaKnown RBP1.41□□□□□ -2.18
RBM39-242ENST00000498280 MAB21L1Q13394 359 aa1.41□□□□□ -2.18
RBM39-242ENST00000498280 GINS1Q14691 196 aa1.41□□□□□ -2.18
RBM39-242ENST00000498280 ALKBH6Q3KRA9 238 aa1.41□□□□□ -2.18
RBM39-242ENST00000498280 LINC00483Q53H64 154 aa1.41□□□□□ -2.18
RBM39-242ENST00000498280 HSP90AB3PQ58FF7 597 aa1.41□□□□□ -2.18
RBM39-242ENST00000498280 PPM1LQ5SGD2 360 aa1.41□□□□□ -2.18
RBM39-242ENST00000498280 CCNJQ5T5M9 372 aa1.41□□□□□ -2.18
RBM39-242ENST00000498280 ARMC12Q5T9G4 340 aa1.41□□□□□ -2.18
RBM39-242ENST00000498280 ANKRD22Q5VYY1 191 aa1.41□□□□□ -2.18
RBM39-242ENST00000498280 TEX43Q6ZNM6 134 aa1.41□□□□□ -2.18
RBM39-242ENST00000498280 ABHD13Q7L211 337 aa1.41□□□□□ -2.18
RBM39-242ENST00000498280 ZNF695Q8IW36 515 aa1.41□□□□□ -2.18
RBM39-242ENST00000498280 PGAM4Q8N0Y7 254 aa1.41□□□□□ -2.18
RBM39-242ENST00000498280 C15orf56Q8N910 161 aa1.41□□□□□ -2.18
RBM39-242ENST00000498280 OR10G4Q8NGN3 311 aa1.41□□□□□ -2.18
RBM39-242ENST00000498280 OR5W2Q8NH69 310 aa1.41□□□□□ -2.18
RBM39-242ENST00000498280 ACMSDQ8TDX5 336 aa1.41□□□□□ -2.18
RBM39-242ENST00000498280 ELMO1Q92556 727 aa1.41□□□□□ -2.18
RBM39-242ENST00000498280 EXOSC8Q96B26 276 aaKnown RBP1.41□□□□□ -2.18
RBM39-242ENST00000498280 CREB3L1Q96BA8 519 aa1.41□□□□□ -2.18
RBM39-242ENST00000498280 SERPINB12Q96P63 405 aa1.41□□□□□ -2.18
RBM39-242ENST00000498280 RTBDNQ9BSG5 229 aaPredicted RBP1.41□□□□□ -2.18
RBM39-242ENST00000498280 RACGAP1Q9H0H5 632 aa1.41□□□□□ -2.18
RBM39-242ENST00000498280 LINC00597Q9H2U6 94 aa1.41□□□□□ -2.18
RBM39-242ENST00000498280 OR12D3Q9UGF7 316 aa1.41□□□□□ -2.18
RBM39-242ENST00000498280 ZNF222Q9UK12 451 aa1.41□□□□□ -2.18
RBM39-242ENST00000498280 PITPNC1Q9UKF7 332 aa1.41□□□□□ -2.18
RBM39-242ENST00000498280 GOLT1BQ9Y3E0 138 aa1.41□□□□□ -2.18
RBM39-242ENST00000498280 CAMTA1Q9Y6Y1 1673 aa1.4□□□□□ -2.19
RBM39-242ENST00000498280 USP47Q96K76 1375 aa1.4□□□□□ -2.19
RBM39-242ENST00000498280 IGHV3-74A0A0B4J1X5 117 aa1.4□□□□□ -2.19
RBM39-242ENST00000498280 A0A1W2PP18 115 aa1.4□□□□□ -2.19
RBM39-242ENST00000498280 SMCO3A2RU48 225 aa1.4□□□□□ -2.19
RBM39-242ENST00000498280 AIM2O14862 343 aa1.4□□□□□ -2.19
RBM39-242ENST00000498280 LSM1O15116 133 aaKnown RBP1.4□□□□□ -2.19
RBM39-242ENST00000498280 MED6O75586 246 aa1.4□□□□□ -2.19
RBM39-242ENST00000498280 CTDNEP1O95476 244 aa1.4□□□□□ -2.19
RBM39-242ENST00000498280 RAB3DO95716 219 aa1.4□□□□□ -2.19
RBM39-242ENST00000498280 BCHEP06276 602 aa1.4□□□□□ -2.19
RBM39-242ENST00000498280 ACSM4P0C7M7 580 aa1.4□□□□□ -2.19
RBM39-242ENST00000498280 IGFBP3P17936 291 aaPredicted RBP1.4□□□□□ -2.19
RBM39-242ENST00000498280 GPX4P36969 197 aaPredicted RBP1.4□□□□□ -2.19
RBM39-242ENST00000498280 CSNK1A1P48729 337 aa1.4□□□□□ -2.19
RBM39-242ENST00000498280 RND2P52198 227 aa1.4□□□□□ -2.19
RBM39-242ENST00000498280 RAP1AP62834 184 aa1.4□□□□□ -2.19
RBM39-242ENST00000498280 BEX3Q00994 111 aa1.4□□□□□ -2.19
RBM39-242ENST00000498280 SELENBP1Q13228 472 aa1.4□□□□□ -2.19
RBM39-242ENST00000498280 EIF4EBP1Q13541 118 aaPredicted RBP1.4□□□□□ -2.19
RBM39-242ENST00000498280 RGNQ15493 299 aa1.4□□□□□ -2.19
RBM39-242ENST00000498280 CHRNA6Q15825 494 aa1.4□□□□□ -2.19
RBM39-242ENST00000498280 STK11Q15831 433 aa1.4□□□□□ -2.19
RBM39-242ENST00000498280 XKR4Q5GH76 650 aa1.4□□□□□ -2.19
RBM39-242ENST00000498280 RAET1LQ5VY80 246 aa1.4□□□□□ -2.19
RBM39-242ENST00000498280 LRRC66Q68CR7 880 aa1.4□□□□□ -2.19
RBM39-242ENST00000498280 CEMP1Q6PRD7 247 aaPredicted RBP1.4□□□□□ -2.19
RBM39-242ENST00000498280 PLET1Q6UQ28 207 aa1.4□□□□□ -2.19
RBM39-242ENST00000498280 HDDC2Q7Z4H3 204 aa1.4□□□□□ -2.19
RBM39-242ENST00000498280 CNPY4Q8N129 248 aa1.4□□□□□ -2.19
RBM39-242ENST00000498280 GTPBP8Q8N3Z3 284 aaPredicted RBP1.4□□□□□ -2.19
RBM39-242ENST00000498280 PRELID2Q8N945 189 aa1.4□□□□□ -2.19
RBM39-242ENST00000498280 OR7G2Q8NG99 324 aa1.4□□□□□ -2.19
RBM39-242ENST00000498280 OR10J6PQ8NGY7 276 aa1.4□□□□□ -2.19
RBM39-242ENST00000498280 LKAAEAR1Q8TD35 194 aa1.4□□□□□ -2.19
RBM39-242ENST00000498280 ZNF578Q96N58 590 aaPredicted RBP1.4□□□□□ -2.19
RBM39-242ENST00000498280 TSNARE1Q96NA8 513 aa1.4□□□□□ -2.19
RBM39-242ENST00000498280 FOPNLQ96NB1 174 aa1.4□□□□□ -2.19
RBM39-242ENST00000498280 PANX1Q96RD7 426 aa1.4□□□□□ -2.19
RBM39-242ENST00000498280 PLIN2Q99541 437 aa1.4□□□□□ -2.19
RBM39-242ENST00000498280 SLC25A2Q9BXI2 301 aa1.4□□□□□ -2.19
RBM39-242ENST00000498280 RPP21Q9H633 154 aaKnown RBP1.4□□□□□ -2.19
RBM39-242ENST00000498280 ZNF430Q9H8G1 570 aaPredicted RBP1.4□□□□□ -2.19
RBM39-242ENST00000498280 C12orf10Q9HB07 376 aa1.4□□□□□ -2.19
RBM39-242ENST00000498280 CYTL1Q9NRR1 136 aa1.4□□□□□ -2.19
RBM39-242ENST00000498280 SAMSN1Q9NSI8 373 aaKnown RBP1.4□□□□□ -2.19
RBM39-242ENST00000498280 NECAP2Q9NVZ3 263 aa1.4□□□□□ -2.19
RBM39-242ENST00000498280 UVRAGQ9P2Y5 699 aa1.4□□□□□ -2.19
RBM39-242ENST00000498280 IGKV2-28A0A075B6P5 120 aa1.39□□□□□ -2.19
RBM39-242ENST00000498280 IGLV1-36A0A0B4J1U3 117 aa1.39□□□□□ -2.19
RBM39-242ENST00000498280 IGHV5-10-1A0A0J9YXX1 117 aa1.39□□□□□ -2.19
RBM39-242ENST00000498280 CTAGE15A4D2H0 777 aa1.39□□□□□ -2.19
RBM39-242ENST00000498280 C9JVG2 144 aa1.39□□□□□ -2.19
RBM39-242ENST00000498280 NUPL2O15504 423 aaKnown RBP1.39□□□□□ -2.19
RBM39-242ENST00000498280 WBP4O75554 376 aaKnown RBP1.39□□□□□ -2.19
RBM39-242ENST00000498280 IGKV2D-28P01615 120 aa1.39□□□□□ -2.19
RBM39-242ENST00000498280 FTH1P02794 183 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms