RNA–Protein interactions for RNA: ENST00000498189.1

BBS9-215, Transcript of Bardet-Biedl syndrome 9, human

TSL 2

Gene BBS9, Length 614 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS9-215	ENST00000498189	CA10	Q9NS85	328 aa		6.06	□□□□□ -1.44
BBS9-215	ENST00000498189	CCDC167	Q9P0B6	97 aa		6.06	□□□□□ -1.44
BBS9-215	ENST00000498189	ZNF346	Q9UL40	294 aa	Known RBP	6.06	□□□□□ -1.44
BBS9-215	ENST00000498189	POFUT2	Q9Y2G5	429 aa		6.06	□□□□□ -1.44
BBS9-215	ENST00000498189	FLNA	P21333	2647 aa	Known RBP	6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	CLDN24	A6NM45	220 aa		6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	HSBP1L1	C9JCN9	74 aa		6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	FTCDNL1	E5RQL4	147 aa		6.05	□□□□□ -1.44
BBS9-215	ENST00000498189		E7EQL1	145 aa		6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	NR5A2	O00482	541 aa		6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	SLC22A2	O15244	555 aa		6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	CHP2	O43745	196 aa		6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	SSX4	O60224	188 aa		6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	SSX5	O60225	188 aa		6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	RAMP1	O60894	148 aa		6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	RAB36	O95755	333 aa		6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	IGLV1-44	P01699	117 aa		6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	IGHV3-9	P01782	118 aa		6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	IGHV4-39	P01824	125 aa		6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	GKN3P	P0CG01	181 aa		6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	FAM157C	P0CG43	387 aa		6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	THRB	P10828	461 aa		6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	ITGA2	P17301	1181 aa		6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	NPR2	P20594	1047 aa		6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	PCSK6	P29122	969 aa		6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	ACVR1B	P36896	505 aa		6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	CDKN1A	P38936	164 aa		6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	RBM34	P42696	430 aa	Known RBP	6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	GUCA1A	P43080	201 aa	Predicted RBP	6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	RPS5	P46782	204 aa	Known RBP	6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	IDH3G	P51553	393 aa	Predicted RBP	6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	AQP5	P55064	265 aa		6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	CLDN17	P56750	224 aa		6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	MRPS11	P82912	194 aa	Known RBP	6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	GALK2	Q01415	458 aa		6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	PUDP	Q08623	228 aa		6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	ZP4	Q12836	540 aa		6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	PMS2P3	Q13401	168 aa		6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	AGK	Q53H12	422 aa		6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	FAM166A	Q6J272	317 aa		6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	ZNF627	Q7L945	461 aa		6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	KCTD20	Q7Z5Y7	419 aa		6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	ARPIN	Q7Z6K5	226 aa		6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	CLIP4	Q8N3C7	705 aa		6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	WDR31	Q8NA23	367 aa		6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	CPEB3	Q8NE35	698 aa	Known RBP	6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	BCL2L2	Q92843	193 aa	Predicted RBP	6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	VPS33A	Q96AX1	596 aa		6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	SLC25A36	Q96CQ1	311 aa		6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	SLC41A3	Q96GZ6	507 aa		6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	OR52B2	Q96RD2	323 aa		6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	KRTAP4-11	Q9BYQ6	195 aa		6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	SP140L	Q9H930	580 aa		6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	SLCO1B3	Q9NPD5	702 aa		6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	RLIM	Q9NVW2	624 aa		6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	NPAP1	Q9NZP6	1156 aa		6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	ZNF229	Q9UJW7	825 aa		6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	KCNS2	Q9ULS6	477 aa		6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	CMAHP	Q9Y471	501 aa		6.05	□□□□□ -1.44
BBS9-215	ENST00000498189	SETD2	Q9BYW2	2564 aa	Predicted RBP	6.04	□□□□□ -1.44
BBS9-215	ENST00000498189		A0A0A6YYJ9	748 aa		6.04	□□□□□ -1.44
BBS9-215	ENST00000498189		A0A0B4J2E0	115 aa		6.04	□□□□□ -1.44
BBS9-215	ENST00000498189		A0A1B0GWA3	101 aa		6.04	□□□□□ -1.44
BBS9-215	ENST00000498189		A0A1B0GX12	115 aa		6.04	□□□□□ -1.44
BBS9-215	ENST00000498189	ZC3H12D	A2A288	527 aa	Known RBP	6.04	□□□□□ -1.44
BBS9-215	ENST00000498189	TRAPPC13	A5PLN9	417 aa		6.04	□□□□□ -1.44
BBS9-215	ENST00000498189	FBP2	O00757	339 aa		6.04	□□□□□ -1.44
BBS9-215	ENST00000498189	ZNF432	O94892	652 aa		6.04	□□□□□ -1.44
BBS9-215	ENST00000498189	SNAPIN	O95295	136 aa		6.04	□□□□□ -1.44
BBS9-215	ENST00000498189	LGI1	O95970	557 aa		6.04	□□□□□ -1.44
BBS9-215	ENST00000498189	CD8A	P01732	235 aa		6.04	□□□□□ -1.44
BBS9-215	ENST00000498189	ATF4	P18848	351 aa	Predicted RBP	6.04	□□□□□ -1.44
BBS9-215	ENST00000498189	CD247	P20963	164 aa		6.04	□□□□□ -1.44
BBS9-215	ENST00000498189	TUBG1	P23258	451 aa		6.04	□□□□□ -1.44
BBS9-215	ENST00000498189	DAP3	P51398	398 aa	Known RBP	6.04	□□□□□ -1.44
BBS9-215	ENST00000498189	ZNF84	P51523	738 aa		6.04	□□□□□ -1.44
BBS9-215	ENST00000498189	P2RY4	P51582	365 aa		6.04	□□□□□ -1.44
BBS9-215	ENST00000498189	ALDH3A2	P51648	485 aa		6.04	□□□□□ -1.44
BBS9-215	ENST00000498189	CHN2	P52757	468 aa		6.04	□□□□□ -1.44
BBS9-215	ENST00000498189	NAAA	Q02083	359 aa		6.04	□□□□□ -1.44
BBS9-215	ENST00000498189	MVK	Q03426	396 aa		6.04	□□□□□ -1.44
BBS9-215	ENST00000498189	PLP2	Q04941	152 aa		6.04	□□□□□ -1.44
BBS9-215	ENST00000498189	CAMK2D	Q13557	499 aa		6.04	□□□□□ -1.44
BBS9-215	ENST00000498189	NFYC	Q13952	458 aa		6.04	□□□□□ -1.44
BBS9-215	ENST00000498189	OR1Q1	Q15612	314 aa		6.04	□□□□□ -1.44
BBS9-215	ENST00000498189	GSG1	Q2KHT4	349 aa		6.04	□□□□□ -1.44
BBS9-215	ENST00000498189	VMAC	Q2NL98	169 aa		6.04	□□□□□ -1.44
BBS9-215	ENST00000498189	TMEM249	Q2WGJ8	235 aa		6.04	□□□□□ -1.44
BBS9-215	ENST00000498189	RUNDC3A	Q59EK9	446 aa		6.04	□□□□□ -1.44
BBS9-215	ENST00000498189	LIPN	Q5VXI9	398 aa		6.04	□□□□□ -1.44
BBS9-215	ENST00000498189	FAM205BP	Q63HN1	556 aa		6.04	□□□□□ -1.44
BBS9-215	ENST00000498189	DHDDS	Q86SQ9	333 aa		6.04	□□□□□ -1.44
BBS9-215	ENST00000498189	C20orf196	Q8IYI0	205 aa		6.04	□□□□□ -1.44
BBS9-215	ENST00000498189	C10orf53	Q8N6V4	93 aa		6.04	□□□□□ -1.44
BBS9-215	ENST00000498189	ZIC4	Q8N9L1	334 aa		6.04	□□□□□ -1.44
BBS9-215	ENST00000498189	OR8J3	Q8NGG0	315 aa		6.04	□□□□□ -1.44
BBS9-215	ENST00000498189	OR6N1	Q8NGY5	312 aa		6.04	□□□□□ -1.44
BBS9-215	ENST00000498189	OR5J2	Q8NH18	312 aa		6.04	□□□□□ -1.44
BBS9-215	ENST00000498189	OR6X1	Q8NH79	312 aa		6.04	□□□□□ -1.44
BBS9-215	ENST00000498189	NFKBID	Q8NI38	313 aa		6.04	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms