RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 GABRB1P18505 474 aa11.89□□□□□ -0.51
CPNE1-227ENST00000498056 NPR2P20594 1047 aa11.89□□□□□ -0.51
CPNE1-227ENST00000498056 GSTT1P30711 240 aa11.89□□□□□ -0.51
CPNE1-227ENST00000498056 FMO3P31513 532 aa11.89□□□□□ -0.51
CPNE1-227ENST00000498056 RPS27P42677 84 aaKnown RBP11.89□□□□□ -0.51
CPNE1-227ENST00000498056 TFF3Q07654 80 aa11.89□□□□□ -0.51
CPNE1-227ENST00000498056 SNTB1Q13884 538 aaKnown RBP11.89□□□□□ -0.51
CPNE1-227ENST00000498056 GABRA6Q16445 453 aa11.89□□□□□ -0.51
CPNE1-227ENST00000498056 SLC35D3Q5M8T2 416 aa11.89□□□□□ -0.51
CPNE1-227ENST00000498056 MEDAGQ5VYS4 303 aa11.89□□□□□ -0.51
CPNE1-227ENST00000498056 OR7E24Q6IFN5 339 aa11.89□□□□□ -0.51
CPNE1-227ENST00000498056 KRT80Q6KB66 452 aa11.89□□□□□ -0.51
CPNE1-227ENST00000498056 B3GLCTQ6Y288 498 aa11.89□□□□□ -0.51
CPNE1-227ENST00000498056 FOXL2NBQ6ZUU3 175 aa11.89□□□□□ -0.51
CPNE1-227ENST00000498056 USP51Q70EK9 711 aa11.89□□□□□ -0.51
CPNE1-227ENST00000498056 SLC16A14Q7RTX9 510 aa11.89□□□□□ -0.51
CPNE1-227ENST00000498056 C17orf78Q8N4C9 275 aa11.89□□□□□ -0.51
CPNE1-227ENST00000498056 ZNF511Q8NB15 262 aa11.89□□□□□ -0.51
CPNE1-227ENST00000498056 SLC26A10Q8NG04 563 aa11.89□□□□□ -0.51
CPNE1-227ENST00000498056 OR6N2Q8NGY6 317 aa11.89□□□□□ -0.51
CPNE1-227ENST00000498056 OR52N5Q8NH56 324 aa11.89□□□□□ -0.51
CPNE1-227ENST00000498056 APH1BQ8WW43 257 aa11.89□□□□□ -0.51
CPNE1-227ENST00000498056 C11orf40Q8WZ69 217 aa11.89□□□□□ -0.51
CPNE1-227ENST00000498056 PTP4A1Q93096 173 aa11.89□□□□□ -0.51
CPNE1-227ENST00000498056 RFKQ969G6 155 aa11.89□□□□□ -0.51
CPNE1-227ENST00000498056 ZC3HAV1LQ96H79 300 aaKnown RBP11.89□□□□□ -0.51
CPNE1-227ENST00000498056 KCNN2Q9H2S1 579 aa11.89□□□□□ -0.51
CPNE1-227ENST00000498056 CCNB1IP1Q9NPC3 277 aa11.89□□□□□ -0.51
CPNE1-227ENST00000498056 NPDC1Q9NQX5 325 aaPredicted RBP11.89□□□□□ -0.51
CPNE1-227ENST00000498056 MOKQ9UQ07 419 aa11.89□□□□□ -0.51
CPNE1-227ENST00000498056 DOPEY2Q9Y3R5 2298 aa11.89□□□□□ -0.51
CPNE1-227ENST00000498056 A1L4Q6 167 aa11.88□□□□□ -0.51
CPNE1-227ENST00000498056 OR5H1A6NKK0 313 aa11.88□□□□□ -0.51
CPNE1-227ENST00000498056 SNTNA6NMZ2 147 aa11.88□□□□□ -0.51
CPNE1-227ENST00000498056 SELENOFO60613 162 aa11.88□□□□□ -0.51
CPNE1-227ENST00000498056 APOL3O95236 402 aa11.88□□□□□ -0.51
CPNE1-227ENST00000498056 SCG5P05408 212 aa11.88□□□□□ -0.51
CPNE1-227ENST00000498056 CD79AP11912 226 aa11.88□□□□□ -0.51
CPNE1-227ENST00000498056 ZNF823P16415 610 aa11.88□□□□□ -0.51
CPNE1-227ENST00000498056 MYF6P23409 242 aa11.88□□□□□ -0.51
CPNE1-227ENST00000498056 BLVRAP53004 296 aa11.88□□□□□ -0.51
CPNE1-227ENST00000498056 EFNB1P98172 346 aa11.88□□□□□ -0.51
CPNE1-227ENST00000498056 SORDQ00796 357 aa11.88□□□□□ -0.51
CPNE1-227ENST00000498056 TEKQ02763 1124 aa11.88□□□□□ -0.51
CPNE1-227ENST00000498056 HSF2Q03933 536 aa11.88□□□□□ -0.51
CPNE1-227ENST00000498056 ZNF91Q05481 1191 aa11.88□□□□□ -0.51
CPNE1-227ENST00000498056 LINC01590Q5TEZ4 76 aa11.88□□□□□ -0.51
CPNE1-227ENST00000498056 UGT2A3Q6UWM9 527 aa11.88□□□□□ -0.51
CPNE1-227ENST00000498056 MEPCEQ7L2J0 689 aaKnown RBP11.88□□□□□ -0.51
CPNE1-227ENST00000498056 SHFQ7M4L6 423 aa11.88□□□□□ -0.51
CPNE1-227ENST00000498056 THAP5Q7Z6K1 395 aa11.88□□□□□ -0.51
CPNE1-227ENST00000498056 LINC00346Q8IVM7 164 aa11.88□□□□□ -0.51
CPNE1-227ENST00000498056 BCL2L2Q92843 193 aaPredicted RBP11.88□□□□□ -0.51
CPNE1-227ENST00000498056 Q96MT0 163 aa11.88□□□□□ -0.51
CPNE1-227ENST00000498056 INTS14Q96SY0 518 aa11.88□□□□□ -0.51
CPNE1-227ENST00000498056 CNN2Q99439 309 aaKnown RBP11.88□□□□□ -0.51
CPNE1-227ENST00000498056 MED18Q9BUE0 208 aa11.88□□□□□ -0.51
CPNE1-227ENST00000498056 ZNF416Q9BWM5 594 aa11.88□□□□□ -0.51
CPNE1-227ENST00000498056 SLC17A5Q9NRA2 495 aa11.88□□□□□ -0.51
CPNE1-227ENST00000498056 MRPL22Q9NWU5 206 aaKnown RBP11.88□□□□□ -0.51
CPNE1-227ENST00000498056 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.88□□□□□ -0.51
CPNE1-227ENST00000498056 AMDHD2Q9Y303 409 aa11.88□□□□□ -0.51
CPNE1-227ENST00000498056 HSPE1-MOB4S4R3N1 261 aa11.88□□□□□ -0.51
CPNE1-227ENST00000498056 ANKHD1Q8IWZ3 2542 aaKnown RBP11.88□□□□□ -0.51
CPNE1-227ENST00000498056 C12orf71A8MTZ7 269 aa11.87□□□□□ -0.51
CPNE1-227ENST00000498056 PRSS44E7EML9 344 aa11.87□□□□□ -0.51
CPNE1-227ENST00000498056 FAM20BO75063 409 aa11.87□□□□□ -0.51
CPNE1-227ENST00000498056 WBP4O75554 376 aaKnown RBP11.87□□□□□ -0.51
CPNE1-227ENST00000498056 HLA-HP01893 362 aa11.87□□□□□ -0.51
CPNE1-227ENST00000498056 TFP02787 698 aa11.87□□□□□ -0.51
CPNE1-227ENST00000498056 HTR1FP30939 366 aa11.87□□□□□ -0.51
CPNE1-227ENST00000498056 ENTPD1P49961 510 aa11.87□□□□□ -0.51
CPNE1-227ENST00000498056 AQP6Q13520 282 aa11.87□□□□□ -0.51
CPNE1-227ENST00000498056 ENDOGQ14249 297 aaKnown RBP11.87□□□□□ -0.51
CPNE1-227ENST00000498056 OCLNQ16625 522 aa11.87□□□□□ -0.51
CPNE1-227ENST00000498056 SMN1Q16637 294 aaKnown RBP11.87□□□□□ -0.51
CPNE1-227ENST00000498056 SLC36A2Q495M3 483 aa11.87□□□□□ -0.51
CPNE1-227ENST00000498056 NRN1LQ496H8 165 aa11.87□□□□□ -0.51
CPNE1-227ENST00000498056 ZNF627Q7L945 461 aa11.87□□□□□ -0.51
CPNE1-227ENST00000498056 OR51G2Q8NGK0 314 aa11.87□□□□□ -0.51
CPNE1-227ENST00000498056 RHOXF1Q8NHV9 184 aa11.87□□□□□ -0.51
CPNE1-227ENST00000498056 HDHD5Q9BXW7 423 aa11.87□□□□□ -0.51
CPNE1-227ENST00000498056 TTTY10Q9BZA0 68 aa11.87□□□□□ -0.51
CPNE1-227ENST00000498056 RNF121Q9H920 327 aa11.87□□□□□ -0.51
CPNE1-227ENST00000498056 WDR76Q9H967 626 aa11.87□□□□□ -0.51
CPNE1-227ENST00000498056 SIAEQ9HAT2 523 aa11.87□□□□□ -0.51
CPNE1-227ENST00000498056 ASH2LQ9UBL3 628 aa11.87□□□□□ -0.51
CPNE1-227ENST00000498056 WARS2Q9UGM6 360 aaKnown RBP11.87□□□□□ -0.51
CPNE1-227ENST00000498056 CLEC18AA5D8T8 446 aa11.86□□□□□ -0.51
CPNE1-227ENST00000498056 ZNF503-AS2A6NEH8 195 aa11.86□□□□□ -0.51
CPNE1-227ENST00000498056 WIPF3A6NGB9 483 aa11.86□□□□□ -0.51
CPNE1-227ENST00000498056 C19orf84I3L1E1 186 aa11.86□□□□□ -0.51
CPNE1-227ENST00000498056 DOK2O60496 412 aa11.86□□□□□ -0.51
CPNE1-227ENST00000498056 UBL3O95164 117 aa11.86□□□□□ -0.51
CPNE1-227ENST00000498056 RAB36O95755 333 aa11.86□□□□□ -0.51
CPNE1-227ENST00000498056 WNT11O96014 354 aa11.86□□□□□ -0.51
CPNE1-227ENST00000498056 HRGP04196 525 aa11.86□□□□□ -0.51
CPNE1-227ENST00000498056 CST2P09228 141 aa11.86□□□□□ -0.51
CPNE1-227ENST00000498056 PATE4P0C8F1 98 aa11.86□□□□□ -0.51
CPNE1-227ENST00000498056 DBTP11182 482 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms