RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 RAB3BP20337 219 aa1.55□□□□□ -2.16
SMC4-227ENST00000497984 CEACAM6P40199 344 aa1.55□□□□□ -2.16
SMC4-227ENST00000497984 SLC11A1P49279 550 aa1.55□□□□□ -2.16
SMC4-227ENST00000497984 PSTKQ8IV42 348 aaKnown RBP1.55□□□□□ -2.16
SMC4-227ENST00000497984 MIR7-3HGQ8N6C7 128 aa1.55□□□□□ -2.16
SMC4-227ENST00000497984 LILRB4Q8NHJ6 448 aa1.55□□□□□ -2.16
SMC4-227ENST00000497984 FAM110BQ8TC76 370 aa1.55□□□□□ -2.16
SMC4-227ENST00000497984 NEURL3Q96EH8 262 aa1.55□□□□□ -2.16
SMC4-227ENST00000497984 SLC41A3Q96GZ6 507 aa1.55□□□□□ -2.16
SMC4-227ENST00000497984 ETNK2Q9NVF9 386 aa1.55□□□□□ -2.16
SMC4-227ENST00000497984 AHDC1Q5TGY3 1603 aaPredicted RBP1.55□□□□□ -2.16
SMC4-227ENST00000497984 IGHV1OR15-9A0A0B4J2B8 117 aa1.54□□□□□ -2.16
SMC4-227ENST00000497984 A0A1W2PPV9 198 aa1.54□□□□□ -2.16
SMC4-227ENST00000497984 BICDL2A1A5D9 508 aa1.54□□□□□ -2.16
SMC4-227ENST00000497984 HAS3O00219 553 aa1.54□□□□□ -2.16
SMC4-227ENST00000497984 SOCS1O15524 211 aa1.54□□□□□ -2.16
SMC4-227ENST00000497984 CBR3O75828 277 aa1.54□□□□□ -2.16
SMC4-227ENST00000497984 CT62P0C5K7 136 aa1.54□□□□□ -2.16
SMC4-227ENST00000497984 UBTFL6P0CB48 400 aaPredicted RBP1.54□□□□□ -2.16
SMC4-227ENST00000497984 DTYMKP23919 212 aa1.54□□□□□ -2.16
SMC4-227ENST00000497984 CDKN1BP46527 198 aa1.54□□□□□ -2.16
SMC4-227ENST00000497984 NUTF2P61970 127 aaKnown RBP1.54□□□□□ -2.16
SMC4-227ENST00000497984 CCDC152Q4G0S7 254 aa1.54□□□□□ -2.16
SMC4-227ENST00000497984 PHYHD1Q5SRE7 291 aa1.54□□□□□ -2.16
SMC4-227ENST00000497984 GPATCH11Q8N954 259 aa1.54□□□□□ -2.16
SMC4-227ENST00000497984 OR8U1Q8NH10 309 aa1.54□□□□□ -2.16
SMC4-227ENST00000497984 NTAN1Q96AB6 310 aa1.54□□□□□ -2.16
SMC4-227ENST00000497984 MRGPRFQ96AM1 343 aa1.54□□□□□ -2.16
SMC4-227ENST00000497984 TBC1D31Q96DN5 1066 aa1.54□□□□□ -2.16
SMC4-227ENST00000497984 GALNT14Q96FL9 552 aa1.54□□□□□ -2.16
SMC4-227ENST00000497984 LZTS2Q9BRK4 669 aa1.54□□□□□ -2.16
SMC4-227ENST00000497984 TIMM29Q9BSF4 260 aa1.54□□□□□ -2.16
SMC4-227ENST00000497984 ZSCAN5AQ9BUG6 496 aa1.54□□□□□ -2.16
SMC4-227ENST00000497984 TEKT3Q9BXF9 490 aa1.54□□□□□ -2.16
SMC4-227ENST00000497984 C1orf198Q9H425 327 aa1.54□□□□□ -2.16
SMC4-227ENST00000497984 TMED5Q9Y3A6 229 aa1.54□□□□□ -2.16
SMC4-227ENST00000497984 C15orf38-AP3S2A0A0A6YYH1 394 aa1.53□□□□□ -2.16
SMC4-227ENST00000497984 SPECC1L-ADORA2AF8WAN1 911 aa1.53□□□□□ -2.16
SMC4-227ENST00000497984 GMFGO60234 142 aa1.53□□□□□ -2.16
SMC4-227ENST00000497984 AIFM1O95831 613 aa1.53□□□□□ -2.16
SMC4-227ENST00000497984 GUCA1CO95843 209 aa1.53□□□□□ -2.16
SMC4-227ENST00000497984 COL8A2P25067 703 aa1.53□□□□□ -2.16
SMC4-227ENST00000497984 MAS1LP35410 378 aa1.53□□□□□ -2.16
SMC4-227ENST00000497984 KIR3DL2P43630 455 aa1.53□□□□□ -2.16
SMC4-227ENST00000497984 CEBPDP49716 269 aaPredicted RBP1.53□□□□□ -2.16
SMC4-227ENST00000497984 PPIL2Q13356 520 aa1.53□□□□□ -2.16
SMC4-227ENST00000497984 RGNQ15493 299 aa1.53□□□□□ -2.16
SMC4-227ENST00000497984 CCNJQ5T5M9 372 aa1.53□□□□□ -2.16
SMC4-227ENST00000497984 SPECC1LQ69YQ0 1117 aa1.53□□□□□ -2.16
SMC4-227ENST00000497984 GALNT17Q6IS24 598 aa1.53□□□□□ -2.16
SMC4-227ENST00000497984 ZFP1Q6P2D0 407 aa1.53□□□□□ -2.16
SMC4-227ENST00000497984 FBXW12Q6X9E4 464 aa1.53□□□□□ -2.16
SMC4-227ENST00000497984 CCDC73Q6ZRK6 1079 aa1.53□□□□□ -2.16
SMC4-227ENST00000497984 TGIF2LXQ8IUE1 241 aa1.53□□□□□ -2.16
SMC4-227ENST00000497984 LIX1Q8N485 282 aa1.53□□□□□ -2.16
SMC4-227ENST00000497984 ST20-AS1Q8NBB2 130 aa1.53□□□□□ -2.16
SMC4-227ENST00000497984 OR4F6Q8NGB9 312 aa1.53□□□□□ -2.16
SMC4-227ENST00000497984 OR4K5Q8NGD3 323 aa1.53□□□□□ -2.16
SMC4-227ENST00000497984 OR10J6PQ8NGY7 276 aa1.53□□□□□ -2.16
SMC4-227ENST00000497984 FLYWCH2Q96CP2 140 aaKnown RBP1.53□□□□□ -2.16
SMC4-227ENST00000497984 ERP44Q9BS26 406 aa1.53□□□□□ -2.16
SMC4-227ENST00000497984 NT5MQ9NPB1 228 aa1.53□□□□□ -2.16
SMC4-227ENST00000497984 ZNF229Q9UJW7 825 aa1.53□□□□□ -2.16
SMC4-227ENST00000497984 MAPK8IP3Q9UPT6 1336 aa1.53□□□□□ -2.16
SMC4-227ENST00000497984 IKBKGQ9Y6K9 419 aa1.53□□□□□ -2.16
SMC4-227ENST00000497984 CENPVL3A0A0U1RRI6 287 aa1.52□□□□□ -2.17
SMC4-227ENST00000497984 GOSR2O14653 212 aa1.52□□□□□ -2.17
SMC4-227ENST00000497984 ZNF208O43345 1280 aa1.52□□□□□ -2.17
SMC4-227ENST00000497984 TMEM50AO95807 157 aa1.52□□□□□ -2.17
SMC4-227ENST00000497984 DESP17661 470 aa1.52□□□□□ -2.17
SMC4-227ENST00000497984 IL1RNP18510 177 aa1.52□□□□□ -2.17
SMC4-227ENST00000497984 WARSP23381 471 aaKnown RBP1.52□□□□□ -2.17
SMC4-227ENST00000497984 GPX6P59796 221 aa1.52□□□□□ -2.17
SMC4-227ENST00000497984 FLI1Q01543 452 aaPredicted RBP1.52□□□□□ -2.17
SMC4-227ENST00000497984 SRSF5Q13243 272 aaKnown RBP1.52□□□□□ -2.17
SMC4-227ENST00000497984 TAF9Q16594 264 aa1.52□□□□□ -2.17
SMC4-227ENST00000497984 IMMTQ16891 758 aaKnown RBP1.52□□□□□ -2.17
SMC4-227ENST00000497984 ORMDL2Q53FV1 153 aa1.52□□□□□ -2.17
SMC4-227ENST00000497984 OR2A2Q6IF42 318 aa1.52□□□□□ -2.17
SMC4-227ENST00000497984 SLC16A13Q7RTY0 426 aa1.52□□□□□ -2.17
SMC4-227ENST00000497984 CDKL3Q8IVW4 592 aaPredicted RBP1.52□□□□□ -2.17
SMC4-227ENST00000497984 LRRC52Q8N7C0 313 aa1.52□□□□□ -2.17
SMC4-227ENST00000497984 OR1L4Q8NGR5 311 aa1.52□□□□□ -2.17
SMC4-227ENST00000497984 RHEBL1Q8TAI7 183 aa1.52□□□□□ -2.17
SMC4-227ENST00000497984 UBE2Q2Q8WVN8 375 aa1.52□□□□□ -2.17
SMC4-227ENST00000497984 SLC25A46Q96AG3 418 aa1.52□□□□□ -2.17
SMC4-227ENST00000497984 TSGA13Q96PP4 275 aa1.52□□□□□ -2.17
SMC4-227ENST00000497984 NPY6RQ99463 290 aa1.52□□□□□ -2.17
SMC4-227ENST00000497984 FMO2Q99518 471 aa1.52□□□□□ -2.17
SMC4-227ENST00000497984 FRMD8P1Q9BZ68 369 aaPredicted RBP1.52□□□□□ -2.17
SMC4-227ENST00000497984 FN3KRPQ9HA64 309 aa1.52□□□□□ -2.17
SMC4-227ENST00000497984 HYOU1Q9Y4L1 999 aa1.52□□□□□ -2.17
SMC4-227ENST00000497984 NPTNQ9Y639 398 aa1.52□□□□□ -2.17
SMC4-227ENST00000497984 KCNE3Q9Y6H6 103 aa1.52□□□□□ -2.17
SMC4-227ENST00000497984 A0A1B0GVL5 298 aa1.51□□□□□ -2.17
SMC4-227ENST00000497984 VGLL3A8MV65 326 aa1.51□□□□□ -2.17
SMC4-227ENST00000497984 UBXN8O00124 270 aa1.51□□□□□ -2.17
SMC4-227ENST00000497984 NDC80O14777 642 aa1.51□□□□□ -2.17
SMC4-227ENST00000497984 MRPS12O15235 138 aaKnown RBP1.51□□□□□ -2.17
SMC4-227ENST00000497984 PSTPIP1O43586 416 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms