RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 POM121L2Q96KW2 1035 aa12.2□□□□□ -0.46
VTI1A-209ENST00000496445 BCL2L14Q9BZR8 327 aa12.2□□□□□ -0.46
VTI1A-209ENST00000496445 RACGAP1Q9H0H5 632 aa12.2□□□□□ -0.46
VTI1A-209ENST00000496445 WNT5BQ9H1J7 359 aa12.2□□□□□ -0.46
VTI1A-209ENST00000496445 MYLK2Q9H1R3 596 aa12.2□□□□□ -0.46
VTI1A-209ENST00000496445 CCNB1IP1Q9NPC3 277 aa12.2□□□□□ -0.46
VTI1A-209ENST00000496445 ZNF275Q9NSD4 429 aaPredicted RBP12.2□□□□□ -0.46
VTI1A-209ENST00000496445 LOC100509620A0A075B734 347 aa12.19□□□□□ -0.46
VTI1A-209ENST00000496445 GMNCA6NCL1 334 aa12.19□□□□□ -0.46
VTI1A-209ENST00000496445 C17orf100A8MU93 164 aa12.19□□□□□ -0.46
VTI1A-209ENST00000496445 EFCAB9A8MZ26 197 aa12.19□□□□□ -0.46
VTI1A-209ENST00000496445 H7C1C5 153 aa12.19□□□□□ -0.46
VTI1A-209ENST00000496445 GSTA4O15217 222 aa12.19□□□□□ -0.46
VTI1A-209ENST00000496445 SCG5P05408 212 aa12.19□□□□□ -0.46
VTI1A-209ENST00000496445 NR2C1P13056 603 aa12.19□□□□□ -0.46
VTI1A-209ENST00000496445 STOMP27105 288 aa12.19□□□□□ -0.46
VTI1A-209ENST00000496445 LAP3P28838 519 aa12.19□□□□□ -0.46
VTI1A-209ENST00000496445 IFNA8P32881 189 aa12.19□□□□□ -0.46
VTI1A-209ENST00000496445 GPR6P46095 362 aaPredicted RBP12.19□□□□□ -0.46
VTI1A-209ENST00000496445 SLC9A3P48764 834 aa12.19□□□□□ -0.46
VTI1A-209ENST00000496445 LCN6P62502 163 aa12.19□□□□□ -0.46
VTI1A-209ENST00000496445 MRPS11P82912 194 aaKnown RBP12.19□□□□□ -0.46
VTI1A-209ENST00000496445 PSG4Q00888 419 aa12.19□□□□□ -0.46
VTI1A-209ENST00000496445 GLO1Q04760 184 aa12.19□□□□□ -0.46
VTI1A-209ENST00000496445 THEM4Q5T1C6 240 aa12.19□□□□□ -0.46
VTI1A-209ENST00000496445 FAM27BQ5VT28 67 aa12.19□□□□□ -0.46
VTI1A-209ENST00000496445 FAM205BPQ63HN1 556 aa12.19□□□□□ -0.46
VTI1A-209ENST00000496445 ZNF730Q6ZMV8 503 aa12.19□□□□□ -0.46
VTI1A-209ENST00000496445 OAFQ86UD1 273 aa12.19□□□□□ -0.46
VTI1A-209ENST00000496445 RNF113BQ8IZP6 322 aaKnown RBP12.19□□□□□ -0.46
VTI1A-209ENST00000496445 FAM156AQ8NDB6 213 aa12.19□□□□□ -0.46
VTI1A-209ENST00000496445 ICA1LQ8NDH6 482 aa12.19□□□□□ -0.46
VTI1A-209ENST00000496445 CLDND2Q8NHS1 167 aa12.19□□□□□ -0.46
VTI1A-209ENST00000496445 TMEM158Q8WZ71 300 aa12.19□□□□□ -0.46
VTI1A-209ENST00000496445 NARFLQ9H6Q4 476 aa12.19□□□□□ -0.46
VTI1A-209ENST00000496445 EFCAB1Q9HAE3 211 aa12.19□□□□□ -0.46
VTI1A-209ENST00000496445 HINT3Q9NQE9 182 aaKnown RBP12.19□□□□□ -0.46
VTI1A-209ENST00000496445 ADAM18Q9Y3Q7 739 aa12.19□□□□□ -0.46
VTI1A-209ENST00000496445 C5orf49A4QMS7 147 aa12.18□□□□□ -0.46
VTI1A-209ENST00000496445 CST2P09228 141 aa12.18□□□□□ -0.46
VTI1A-209ENST00000496445 HNF1AP20823 631 aa12.18□□□□□ -0.46
VTI1A-209ENST00000496445 CCNOP22674 350 aa12.18□□□□□ -0.46
VTI1A-209ENST00000496445 THBS2P35442 1172 aa12.18□□□□□ -0.46
VTI1A-209ENST00000496445 MPV17P39210 176 aa12.18□□□□□ -0.46
VTI1A-209ENST00000496445 RAD52P43351 418 aa12.18□□□□□ -0.46
VTI1A-209ENST00000496445 PSME3P61289 254 aa12.18□□□□□ -0.46
VTI1A-209ENST00000496445 SRSF2Q01130 221 aaKnown RBP12.18□□□□□ -0.46
VTI1A-209ENST00000496445 ENDOGQ14249 297 aaKnown RBP12.18□□□□□ -0.46
VTI1A-209ENST00000496445 KRTAP24-1Q3LI83 254 aa12.18□□□□□ -0.46
VTI1A-209ENST00000496445 ANKDD1AQ495B1 522 aa12.18□□□□□ -0.46
VTI1A-209ENST00000496445 MESTQ5EB52 335 aa12.18□□□□□ -0.46
VTI1A-209ENST00000496445 SPATA46Q5T0L3 261 aa12.18□□□□□ -0.46
VTI1A-209ENST00000496445 RFPL4BQ6ZWI9 263 aa12.18□□□□□ -0.46
VTI1A-209ENST00000496445 FAM122BQ7Z309 247 aa12.18□□□□□ -0.46
VTI1A-209ENST00000496445 OR1J1Q8NGS3 322 aa12.18□□□□□ -0.46
VTI1A-209ENST00000496445 SLC7A13Q8TCU3 470 aa12.18□□□□□ -0.46
VTI1A-209ENST00000496445 IPCEF1Q8WWN9 437 aaPredicted RBP12.18□□□□□ -0.46
VTI1A-209ENST00000496445 C11orf40Q8WZ69 217 aa12.18□□□□□ -0.46
VTI1A-209ENST00000496445 FAM162AQ96A26 154 aa12.18□□□□□ -0.46
VTI1A-209ENST00000496445 RBP7Q96R05 134 aa12.18□□□□□ -0.46
VTI1A-209ENST00000496445 KCTD14Q9BQ13 255 aaPredicted RBP12.18□□□□□ -0.46
VTI1A-209ENST00000496445 OR2H1Q9GZK4 316 aa12.18□□□□□ -0.46
VTI1A-209ENST00000496445 LRMDAQ9H2I8 198 aa12.18□□□□□ -0.46
VTI1A-209ENST00000496445 KCNN2Q9H2S1 579 aa12.18□□□□□ -0.46
VTI1A-209ENST00000496445 NMNAT1Q9HAN9 279 aaPredicted RBP12.18□□□□□ -0.46
VTI1A-209ENST00000496445 SLCO1C1Q9NYB5 712 aa12.18□□□□□ -0.46
VTI1A-209ENST00000496445 A0A1W2PPL8 197 aa12.17□□□□□ -0.46
VTI1A-209ENST00000496445 A6NIZ1 184 aa12.17□□□□□ -0.46
VTI1A-209ENST00000496445 FAM157AC9JC47 383 aa12.17□□□□□ -0.46
VTI1A-209ENST00000496445 ICMTO60725 284 aa12.17□□□□□ -0.46
VTI1A-209ENST00000496445 IGHV3-13P01766 116 aa12.17□□□□□ -0.46
VTI1A-209ENST00000496445 RAP1BP61224 184 aa12.17□□□□□ -0.46
VTI1A-209ENST00000496445 RAP1AP62834 184 aa12.17□□□□□ -0.46
VTI1A-209ENST00000496445 CCL8P80075 99 aa12.17□□□□□ -0.46
VTI1A-209ENST00000496445 ZNF774Q6NX45 483 aa12.17□□□□□ -0.46
VTI1A-209ENST00000496445 TMPRSS11FQ6ZWK6 438 aa12.17□□□□□ -0.46
VTI1A-209ENST00000496445 FKBP9P1Q75LS8 142 aa12.17□□□□□ -0.46
VTI1A-209ENST00000496445 FAM86B1Q8N7N1 296 aa12.17□□□□□ -0.46
VTI1A-209ENST00000496445 FNDC8Q8TC99 324 aa12.17□□□□□ -0.46
VTI1A-209ENST00000496445 SNX33Q8WV41 574 aa12.17□□□□□ -0.46
VTI1A-209ENST00000496445 MARS2Q96GW9 593 aaKnown RBP12.17□□□□□ -0.46
VTI1A-209ENST00000496445 FAM46AQ96IP4 442 aaKnown RBP12.17□□□□□ -0.46
VTI1A-209ENST00000496445 ZNF416Q9BWM5 594 aa12.17□□□□□ -0.46
VTI1A-209ENST00000496445 ANKRD19PQ9H560 264 aa12.17□□□□□ -0.46
VTI1A-209ENST00000496445 POLE4Q9NR33 117 aa12.17□□□□□ -0.46
VTI1A-209ENST00000496445 EGFL7Q9UHF1 273 aa12.17□□□□□ -0.46
VTI1A-209ENST00000496445 ENPP4Q9Y6X5 453 aa12.17□□□□□ -0.46
VTI1A-209ENST00000496445 PPIHO43447 177 aaKnown RBP12.16□□□□□ -0.46
VTI1A-209ENST00000496445 CDC14BO60729 498 aa12.16□□□□□ -0.46
VTI1A-209ENST00000496445 CD14P08571 375 aa12.16□□□□□ -0.46
VTI1A-209ENST00000496445 LIMS1P48059 325 aa12.16□□□□□ -0.46
VTI1A-209ENST00000496445 GDI2P50395 445 aaKnown RBP12.16□□□□□ -0.46
VTI1A-209ENST00000496445 DVL1P1P54792 670 aaPredicted RBP12.16□□□□□ -0.46
VTI1A-209ENST00000496445 TMEM33P57088 247 aa12.16□□□□□ -0.46
VTI1A-209ENST00000496445 SELENOVP59797 346 aa12.16□□□□□ -0.46
VTI1A-209ENST00000496445 PCGF3Q3KNV8 242 aa12.16□□□□□ -0.46
VTI1A-209ENST00000496445 ZBED5Q49AG3 693 aa12.16□□□□□ -0.46
VTI1A-209ENST00000496445 TMEM154Q6P9G4 183 aa12.16□□□□□ -0.46
VTI1A-209ENST00000496445 UGT2A3Q6UWM9 527 aa12.16□□□□□ -0.46
VTI1A-209ENST00000496445 SLC25A40Q8TBP6 338 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms