RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	DCTN6	O00399	190 aa		11.92	□□□□□ -0.5
APTX-231	ENST00000494973	LRRTM2	O43300	516 aa		11.92	□□□□□ -0.5
APTX-231	ENST00000494973	RAB36	O95755	333 aa		11.92	□□□□□ -0.5
APTX-231	ENST00000494973	IGHV3-9	P01782	118 aa		11.92	□□□□□ -0.5
APTX-231	ENST00000494973	PRB1	P04280	392 aa		11.92	□□□□□ -0.5
APTX-231	ENST00000494973	SBK2	P0C263	348 aa		11.92	□□□□□ -0.5
APTX-231	ENST00000494973	OR2T7	P0C7T2	308 aa		11.92	□□□□□ -0.5
APTX-231	ENST00000494973	PSMB1	P20618	241 aa	Known RBP	11.92	□□□□□ -0.5
APTX-231	ENST00000494973	CRHBP	P24387	322 aa		11.92	□□□□□ -0.5
APTX-231	ENST00000494973	SLC15A1	P46059	708 aa		11.92	□□□□□ -0.5
APTX-231	ENST00000494973	ASCL1	P50553	236 aa		11.92	□□□□□ -0.5
APTX-231	ENST00000494973	NUDT6	P53370	316 aa		11.92	□□□□□ -0.5
APTX-231	ENST00000494973	SCRN3	Q0VDG4	424 aa		11.92	□□□□□ -0.5
APTX-231	ENST00000494973	AQP6	Q13520	282 aa		11.92	□□□□□ -0.5
APTX-231	ENST00000494973	SLC36A2	Q495M3	483 aa		11.92	□□□□□ -0.5
APTX-231	ENST00000494973	PHYHD1	Q5SRE7	291 aa		11.92	□□□□□ -0.5
APTX-231	ENST00000494973	FAM27B	Q5VT28	67 aa		11.92	□□□□□ -0.5
APTX-231	ENST00000494973	UGT2A3	Q6UWM9	527 aa		11.92	□□□□□ -0.5
APTX-231	ENST00000494973	EGFL6	Q8IUX8	553 aa		11.92	□□□□□ -0.5
APTX-231	ENST00000494973	ERI1	Q8IV48	349 aa	Known RBP	11.92	□□□□□ -0.5
APTX-231	ENST00000494973	STX19	Q8N4C7	294 aa		11.92	□□□□□ -0.5
APTX-231	ENST00000494973	OR51L1	Q8NGJ5	315 aa		11.92	□□□□□ -0.5
APTX-231	ENST00000494973	OR51G2	Q8NGK0	314 aa		11.92	□□□□□ -0.5
APTX-231	ENST00000494973	OR6N2	Q8NGY6	317 aa		11.92	□□□□□ -0.5
APTX-231	ENST00000494973	OR2AJ1	Q8NGZ0	328 aa		11.92	□□□□□ -0.5
APTX-231	ENST00000494973	OR2T27	Q8NH04	317 aa		11.92	□□□□□ -0.5
APTX-231	ENST00000494973	HAVCR2	Q8TDQ0	301 aa		11.92	□□□□□ -0.5
APTX-231	ENST00000494973	ASB17	Q8WXJ9	295 aa		11.92	□□□□□ -0.5
APTX-231	ENST00000494973	COPS4	Q9BT78	406 aa		11.92	□□□□□ -0.5
APTX-231	ENST00000494973	JAM3	Q9BX67	310 aa		11.92	□□□□□ -0.5
APTX-231	ENST00000494973	WDR76	Q9H967	626 aa		11.92	□□□□□ -0.5
APTX-231	ENST00000494973	FGF20	Q9NP95	211 aa	Predicted RBP	11.92	□□□□□ -0.5
APTX-231	ENST00000494973	UBAP1	Q9NZ09	502 aa		11.92	□□□□□ -0.5
APTX-231	ENST00000494973	JKAMP	Q9P055	326 aa		11.92	□□□□□ -0.5
APTX-231	ENST00000494973	EXOG	Q9Y2C4	368 aa	Known RBP	11.92	□□□□□ -0.5
APTX-231	ENST00000494973	EXOSC1	Q9Y3B2	195 aa	Known RBP	11.92	□□□□□ -0.5
APTX-231	ENST00000494973	UGT2A1	Q9Y4X1	527 aa		11.92	□□□□□ -0.5
APTX-231	ENST00000494973	NBAS	A2RRP1	2371 aa		11.92	□□□□□ -0.5
APTX-231	ENST00000494973	IGKV1D-43	A0A0B4J1Z2	117 aa		11.91	□□□□□ -0.5
APTX-231	ENST00000494973		A8MXE2	369 aa		11.91	□□□□□ -0.5
APTX-231	ENST00000494973	ZNF670-ZNF695	F2Z2N8	137 aa		11.91	□□□□□ -0.5
APTX-231	ENST00000494973	UBL3	O95164	117 aa		11.91	□□□□□ -0.5
APTX-231	ENST00000494973	CST2	P09228	141 aa		11.91	□□□□□ -0.5
APTX-231	ENST00000494973	IL32	P24001	234 aa		11.91	□□□□□ -0.5
APTX-231	ENST00000494973	EEF1B2	P24534	225 aa	Known RBP	11.91	□□□□□ -0.5
APTX-231	ENST00000494973	PEX19	P40855	299 aa		11.91	□□□□□ -0.5
APTX-231	ENST00000494973	ACTA2	P62736	377 aa		11.91	□□□□□ -0.5
APTX-231	ENST00000494973	ACTG2	P63267	376 aa		11.91	□□□□□ -0.5
APTX-231	ENST00000494973	ARF1	P84077	181 aa	Known RBP	11.91	□□□□□ -0.5
APTX-231	ENST00000494973	IGFBP7	Q16270	282 aa		11.91	□□□□□ -0.5
APTX-231	ENST00000494973	SGCA	Q16586	387 aa		11.91	□□□□□ -0.5
APTX-231	ENST00000494973	SMN1	Q16637	294 aa	Known RBP	11.91	□□□□□ -0.5
APTX-231	ENST00000494973	PCK2	Q16822	640 aa		11.91	□□□□□ -0.5
APTX-231	ENST00000494973	FBXL19-AS1	Q494R0	122 aa		11.91	□□□□□ -0.5
APTX-231	ENST00000494973	SLC18B1	Q6NT16	456 aa		11.91	□□□□□ -0.5
APTX-231	ENST00000494973	XKRX	Q6PP77	449 aa		11.91	□□□□□ -0.5
APTX-231	ENST00000494973	AHSA2	Q719I0	299 aa		11.91	□□□□□ -0.5
APTX-231	ENST00000494973	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	11.91	□□□□□ -0.5
APTX-231	ENST00000494973	BCDIN3D	Q7Z5W3	292 aa	Known RBP	11.91	□□□□□ -0.5
APTX-231	ENST00000494973	P2RY8	Q86VZ1	359 aa		11.91	□□□□□ -0.5
APTX-231	ENST00000494973	WDFY1	Q8IWB7	410 aa		11.91	□□□□□ -0.5
APTX-231	ENST00000494973	TIGD4	Q8IY51	512 aa		11.91	□□□□□ -0.5
APTX-231	ENST00000494973	SLC22A24	Q8N4F4	322 aa		11.91	□□□□□ -0.5
APTX-231	ENST00000494973	ZNF808	Q8N4W9	903 aa	Predicted RBP	11.91	□□□□□ -0.5
APTX-231	ENST00000494973	ZNF610	Q8N9Z0	462 aa		11.91	□□□□□ -0.5
APTX-231	ENST00000494973	STEAP2	Q8NFT2	490 aa		11.91	□□□□□ -0.5
APTX-231	ENST00000494973	OR1K1	Q8NGR3	316 aa		11.91	□□□□□ -0.5
APTX-231	ENST00000494973	CA5BP1	Q8WTZ4	195 aa		11.91	□□□□□ -0.5
APTX-231	ENST00000494973	C11orf40	Q8WZ69	217 aa		11.91	□□□□□ -0.5
APTX-231	ENST00000494973	CCDC120	Q96HB5	630 aa		11.91	□□□□□ -0.5
APTX-231	ENST00000494973	TMEM80	Q96HE8	168 aa		11.91	□□□□□ -0.5
APTX-231	ENST00000494973	OPN3	Q9H1Y3	402 aa	Predicted RBP	11.91	□□□□□ -0.5
APTX-231	ENST00000494973	DUSP21	Q9H596	190 aa		11.91	□□□□□ -0.5
APTX-231	ENST00000494973	ADGRL4	Q9HBW9	690 aa		11.91	□□□□□ -0.5
APTX-231	ENST00000494973	FKBP14	Q9NWM8	211 aa		11.91	□□□□□ -0.5
APTX-231	ENST00000494973	DIMT1	Q9UNQ2	313 aa	Known RBP	11.91	□□□□□ -0.5
APTX-231	ENST00000494973	FAM171A2	A8MVW0	826 aa		11.9	□□□□□ -0.5
APTX-231	ENST00000494973	RGS10	O43665	173 aa		11.9	□□□□□ -0.5
APTX-231	ENST00000494973	XPNPEP2	O43895	674 aa		11.9	□□□□□ -0.5
APTX-231	ENST00000494973	ITGA5	P08648	1049 aa		11.9	□□□□□ -0.5
APTX-231	ENST00000494973	SPARC	P09486	303 aa		11.9	□□□□□ -0.5
APTX-231	ENST00000494973	B4GALT1	P15291	398 aa		11.9	□□□□□ -0.5
APTX-231	ENST00000494973	PPP3CB	P16298	524 aa		11.9	□□□□□ -0.5
APTX-231	ENST00000494973	IGHV1-2	P23083	117 aa		11.9	□□□□□ -0.5
APTX-231	ENST00000494973	CD79B	P40259	229 aa		11.9	□□□□□ -0.5
APTX-231	ENST00000494973	UBE2N	P61088	152 aa	Known RBP	11.9	□□□□□ -0.5
APTX-231	ENST00000494973	SLC35A2	P78381	396 aa		11.9	□□□□□ -0.5
APTX-231	ENST00000494973	ETFDH	Q16134	617 aa		11.9	□□□□□ -0.5
APTX-231	ENST00000494973	SFRP5	Q5T4F7	317 aa		11.9	□□□□□ -0.5
APTX-231	ENST00000494973	RNLS	Q5VYX0	342 aa		11.9	□□□□□ -0.5
APTX-231	ENST00000494973	TMEM53	Q6P2H8	277 aa		11.9	□□□□□ -0.5
APTX-231	ENST00000494973	KCTD18	Q6PI47	426 aa	Predicted RBP	11.9	□□□□□ -0.5
APTX-231	ENST00000494973	RHOU	Q7L0Q8	258 aa		11.9	□□□□□ -0.5
APTX-231	ENST00000494973	LINGO2	Q7L985	606 aa		11.9	□□□□□ -0.5
APTX-231	ENST00000494973	SLC16A14	Q7RTX9	510 aa		11.9	□□□□□ -0.5
APTX-231	ENST00000494973	SLC35F2	Q8IXU6	374 aa		11.9	□□□□□ -0.5
APTX-231	ENST00000494973	SVOP	Q8N4V2	548 aa		11.9	□□□□□ -0.5
APTX-231	ENST00000494973	ACBD7	Q8N6N7	88 aa		11.9	□□□□□ -0.5
APTX-231	ENST00000494973	ZNF433	Q8N7K0	673 aa	Predicted RBP	11.9	□□□□□ -0.5
APTX-231	ENST00000494973	ZNF511	Q8NB15	262 aa		11.9	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms