RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 OR10S1Q8NGN2 331 aa9.27□□□□□ -0.92
SAMM50-206ENST00000494795 YIPF5Q969M3 257 aa9.27□□□□□ -0.92
SAMM50-206ENST00000494795 PPP1R14BQ96C90 147 aa9.27□□□□□ -0.92
SAMM50-206ENST00000494795 CHST11Q9NPF2 352 aa9.27□□□□□ -0.92
SAMM50-206ENST00000494795 PLSCR3Q9NRY6 295 aa9.27□□□□□ -0.92
SAMM50-206ENST00000494795 CENPMQ9NSP4 180 aa9.27□□□□□ -0.92
SAMM50-206ENST00000494795 NPIPA1Q9UND3 350 aa9.27□□□□□ -0.92
SAMM50-206ENST00000494795 FKBP7Q9Y680 259 aa9.27□□□□□ -0.92
SAMM50-206ENST00000494795 LOC102723996A0A087X1L8 192 aa9.27□□□□□ -0.93
SAMM50-206ENST00000494795 A6NL46 340 aa9.27□□□□□ -0.93
SAMM50-206ENST00000494795 CDX4O14627 284 aaPredicted RBP9.27□□□□□ -0.93
SAMM50-206ENST00000494795 ZNHIT1O43257 154 aa9.27□□□□□ -0.93
SAMM50-206ENST00000494795 MT-ND4P03905 459 aa9.27□□□□□ -0.93
SAMM50-206ENST00000494795 RFPL3SP0C7P2 107 aa9.27□□□□□ -0.93
SAMM50-206ENST00000494795 CD53P19397 219 aa9.27□□□□□ -0.93
SAMM50-206ENST00000494795 TCN2P20062 427 aa9.27□□□□□ -0.93
SAMM50-206ENST00000494795 APOBEC1P41238 236 aaKnown RBP9.27□□□□□ -0.93
SAMM50-206ENST00000494795 ANGPT1Q15389 498 aa9.27□□□□□ -0.93
SAMM50-206ENST00000494795 TBRG1Q3YBR2 411 aa9.27□□□□□ -0.93
SAMM50-206ENST00000494795 Q499Y3 187 aa9.27□□□□□ -0.93
SAMM50-206ENST00000494795 LRFN4Q6PJG9 635 aa9.27□□□□□ -0.93
SAMM50-206ENST00000494795 RTN4RL2Q86UN3 420 aa9.27□□□□□ -0.93
SAMM50-206ENST00000494795 TMPRSS12Q86WS5 348 aa9.27□□□□□ -0.93
SAMM50-206ENST00000494795 SETD6Q8TBK2 473 aa9.27□□□□□ -0.93
SAMM50-206ENST00000494795 ENKURQ8TC29 256 aa9.27□□□□□ -0.93
SAMM50-206ENST00000494795 ST8SIA1Q92185 356 aa9.27□□□□□ -0.93
SAMM50-206ENST00000494795 OCSTAMPQ9BR26 566 aa9.27□□□□□ -0.93
SAMM50-206ENST00000494795 ZCCHC4Q9H5U6 513 aa9.27□□□□□ -0.93
SAMM50-206ENST00000494795 RNF121Q9H920 327 aa9.27□□□□□ -0.93
SAMM50-206ENST00000494795 ELF5Q9UKW6 265 aaPredicted RBP9.27□□□□□ -0.93
SAMM50-206ENST00000494795 LOXL2Q9Y4K0 774 aa9.27□□□□□ -0.93
SAMM50-206ENST00000494795 SLC19A2O60779 497 aa9.27□□□□□ -0.93
SAMM50-206ENST00000494795 YIF1BQ5BJH7 314 aa9.27□□□□□ -0.93
SAMM50-206ENST00000494795 PHYHD1Q5SRE7 291 aa9.27□□□□□ -0.93
SAMM50-206ENST00000494795 NDUFAF7Q7L592 441 aa9.27□□□□□ -0.93
SAMM50-206ENST00000494795 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.27□□□□□ -0.93
SAMM50-206ENST00000494795 SIAH3Q8IW03 269 aa9.27□□□□□ -0.93
SAMM50-206ENST00000494795 SCAIQ8N9R8 606 aa9.27□□□□□ -0.93
SAMM50-206ENST00000494795 ZBTB44Q8NCP5 570 aa9.27□□□□□ -0.93
SAMM50-206ENST00000494795 OR2Y1Q8NGV0 311 aa9.27□□□□□ -0.93
SAMM50-206ENST00000494795 MFSD8Q8NHS3 518 aa9.27□□□□□ -0.93
SAMM50-206ENST00000494795 HAVCR2Q8TDQ0 301 aa9.27□□□□□ -0.93
SAMM50-206ENST00000494795 ABCG5Q9H222 651 aa9.27□□□□□ -0.93
SAMM50-206ENST00000494795 RBFOX1Q9NWB1 397 aaKnown RBP9.27□□□□□ -0.93
SAMM50-206ENST00000494795 ALG5Q9Y673 324 aa9.27□□□□□ -0.93
SAMM50-206ENST00000494795 TRBV5-5A0A0J9YX44 114 aa9.26□□□□□ -0.93
SAMM50-206ENST00000494795 FAM240BA0A1B0GVZ2 78 aa9.26□□□□□ -0.93
SAMM50-206ENST00000494795 MEIS3P1A6NDR6 274 aa9.26□□□□□ -0.93
SAMM50-206ENST00000494795 OR2T1O43869 369 aa9.26□□□□□ -0.93
SAMM50-206ENST00000494795 ARL6IP5O75915 188 aa9.26□□□□□ -0.93
SAMM50-206ENST00000494795 KDM4BO94953 1096 aa9.26□□□□□ -0.93
SAMM50-206ENST00000494795 ITGA5P08648 1049 aa9.26□□□□□ -0.93
SAMM50-206ENST00000494795 HOXD12P35452 270 aa9.26□□□□□ -0.93
SAMM50-206ENST00000494795 TRAM1Q15629 374 aa9.26□□□□□ -0.93
SAMM50-206ENST00000494795 CFAP77Q6ZQR2 320 aa9.26□□□□□ -0.93
SAMM50-206ENST00000494795 KRT77Q7Z794 578 aa9.26□□□□□ -0.93
SAMM50-206ENST00000494795 OR51D1Q8NGF3 324 aa9.26□□□□□ -0.93
SAMM50-206ENST00000494795 ST7LQ8TDW4 575 aa9.26□□□□□ -0.93
SAMM50-206ENST00000494795 OIT3Q8WWZ8 545 aa9.26□□□□□ -0.93
SAMM50-206ENST00000494795 C11orf40Q8WZ69 217 aa9.26□□□□□ -0.93
SAMM50-206ENST00000494795 TTC9Q92623 222 aa9.26□□□□□ -0.93
SAMM50-206ENST00000494795 KIAA1143Q96AT1 154 aaPredicted RBP9.26□□□□□ -0.93
SAMM50-206ENST00000494795 ZNF837Q96EG3 531 aaPredicted RBP9.26□□□□□ -0.93
SAMM50-206ENST00000494795 CGGBP1Q9UFW8 167 aaPredicted RBP9.26□□□□□ -0.93
SAMM50-206ENST00000494795 V9GY05 133 aa9.26□□□□□ -0.93
SAMM50-206ENST00000494795 C9orf172C9J069 976 aa9.26□□□□□ -0.93
SAMM50-206ENST00000494795 E9PLN8 166 aa9.26□□□□□ -0.93
SAMM50-206ENST00000494795 ZIC3O60481 467 aa9.26□□□□□ -0.93
SAMM50-206ENST00000494795 GMDSO60547 372 aa9.26□□□□□ -0.93
SAMM50-206ENST00000494795 ENPP1P22413 925 aa9.26□□□□□ -0.93
SAMM50-206ENST00000494795 TOMM20Q15388 145 aa9.26□□□□□ -0.93
SAMM50-206ENST00000494795 OR10K2Q6IF99 312 aa9.26□□□□□ -0.93
SAMM50-206ENST00000494795 PPP1R32Q7Z5V6 425 aa9.26□□□□□ -0.93
SAMM50-206ENST00000494795 ZNF679Q8IYX0 411 aa9.26□□□□□ -0.93
SAMM50-206ENST00000494795 BEST4Q8NFU0 473 aa9.26□□□□□ -0.93
SAMM50-206ENST00000494795 OR4K17Q8NGC6 315 aa9.26□□□□□ -0.93
SAMM50-206ENST00000494795 SYNPRQ8TBG9 265 aa9.26□□□□□ -0.93
SAMM50-206ENST00000494795 ACOT12Q8WYK0 555 aa9.26□□□□□ -0.93
SAMM50-206ENST00000494795 RFT1Q96AA3 541 aa9.26□□□□□ -0.93
SAMM50-206ENST00000494795 DDIT4LQ96D03 193 aa9.26□□□□□ -0.93
SAMM50-206ENST00000494795 DCBLD2Q96PD2 775 aa9.26□□□□□ -0.93
SAMM50-206ENST00000494795 IER2Q9BTL4 223 aa9.26□□□□□ -0.93
SAMM50-206ENST00000494795 SEC61A2Q9H9S3 476 aa9.26□□□□□ -0.93
SAMM50-206ENST00000494795 FLVCR2Q9UPI3 526 aa9.26□□□□□ -0.93
SAMM50-206ENST00000494795 NSG1A0A0A6YYJ2 146 aa9.26□□□□□ -0.93
SAMM50-206ENST00000494795 A0A1W2PPL8 197 aa9.26□□□□□ -0.93
SAMM50-206ENST00000494795 PINLYPA6NC86 204 aa9.26□□□□□ -0.93
SAMM50-206ENST00000494795 GATBO75879 557 aaKnown RBP9.26□□□□□ -0.93
SAMM50-206ENST00000494795 SERPINA3P01011 423 aa9.26□□□□□ -0.93
SAMM50-206ENST00000494795 NTF4P34130 210 aa9.26□□□□□ -0.93
SAMM50-206ENST00000494795 PTGS2P35354 604 aa9.26□□□□□ -0.93
SAMM50-206ENST00000494795 STARP49675 285 aa9.26□□□□□ -0.93
SAMM50-206ENST00000494795 HSF2Q03933 536 aa9.26□□□□□ -0.93
SAMM50-206ENST00000494795 GLO1Q04760 184 aa9.26□□□□□ -0.93
SAMM50-206ENST00000494795 SF3B4Q15427 424 aaKnown RBP eCLIP9.26□□□□□ -0.93
SAMM50-206ENST00000494795 NAA40Q86UY6 237 aa9.26□□□□□ -0.93
SAMM50-206ENST00000494795 ZNF227Q86WZ6 799 aa9.26□□□□□ -0.93
SAMM50-206ENST00000494795 ZBTB8BQ8NAP8 495 aaPredicted RBP9.26□□□□□ -0.93
SAMM50-206ENST00000494795 SLC22A8Q8TCC7 542 aa9.26□□□□□ -0.93
SAMM50-206ENST00000494795 CT55Q8WUE5 264 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms