RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 SIAEQ9HAT2 523 aa9.92□□□□□ -0.82
VTI1A-208ENST00000494728 SMURF2Q9HAU4 748 aa9.92□□□□□ -0.82
VTI1A-208ENST00000494728 HINT3Q9NQE9 182 aaKnown RBP9.92□□□□□ -0.82
VTI1A-208ENST00000494728 ADAM18Q9Y3Q7 739 aa9.92□□□□□ -0.82
VTI1A-208ENST00000494728 TRRAPQ9Y4A5 3859 aa9.92□□□□□ -0.82
VTI1A-208ENST00000494728 A0A087WUU8 490 aa9.91□□□□□ -0.82
VTI1A-208ENST00000494728 IQCMA0A1B0GVH7 501 aa9.91□□□□□ -0.82
VTI1A-208ENST00000494728 IMPA2O14732 288 aa9.91□□□□□ -0.82
VTI1A-208ENST00000494728 NGFP01138 241 aa9.91□□□□□ -0.82
VTI1A-208ENST00000494728 COX4I1P13073 169 aa9.91□□□□□ -0.82
VTI1A-208ENST00000494728 ITGA2P17301 1181 aa9.91□□□□□ -0.82
VTI1A-208ENST00000494728 CCNOP22674 350 aa9.91□□□□□ -0.82
VTI1A-208ENST00000494728 STOMP27105 288 aa9.91□□□□□ -0.82
VTI1A-208ENST00000494728 APLNRP35414 380 aa9.91□□□□□ -0.82
VTI1A-208ENST00000494728 GSK3BP49841 420 aa9.91□□□□□ -0.82
VTI1A-208ENST00000494728 MMP15P51511 669 aa9.91□□□□□ -0.82
VTI1A-208ENST00000494728 CTXN1P60606 82 aa9.91□□□□□ -0.82
VTI1A-208ENST00000494728 RPL27P61353 136 aaKnown RBP9.91□□□□□ -0.82
VTI1A-208ENST00000494728 HSF2Q03933 536 aa9.91□□□□□ -0.82
VTI1A-208ENST00000494728 PRKCDQ05655 676 aa9.91□□□□□ -0.82
VTI1A-208ENST00000494728 DBPQ10586 325 aaPredicted RBP9.91□□□□□ -0.82
VTI1A-208ENST00000494728 ST3GAL3Q11203 375 aa9.91□□□□□ -0.82
VTI1A-208ENST00000494728 ENDOGQ14249 297 aaKnown RBP9.91□□□□□ -0.82
VTI1A-208ENST00000494728 SGCAQ16586 387 aa9.91□□□□□ -0.82
VTI1A-208ENST00000494728 MESTQ5EB52 335 aa9.91□□□□□ -0.82
VTI1A-208ENST00000494728 C1orf229Q6ZS94 237 aaPredicted RBP9.91□□□□□ -0.82
VTI1A-208ENST00000494728 HDDC2Q7Z4H3 204 aa9.91□□□□□ -0.82
VTI1A-208ENST00000494728 DPPA2Q7Z7J5 298 aa9.91□□□□□ -0.82
VTI1A-208ENST00000494728 PCYOX1LQ8NBM8 494 aa9.91□□□□□ -0.82
VTI1A-208ENST00000494728 SLC25A40Q8TBP6 338 aa9.91□□□□□ -0.82
VTI1A-208ENST00000494728 MARS2Q96GW9 593 aaKnown RBP9.91□□□□□ -0.82
VTI1A-208ENST00000494728 HSH2DQ96JZ2 352 aa9.91□□□□□ -0.82
VTI1A-208ENST00000494728 ALG12Q9BV10 488 aa9.91□□□□□ -0.82
VTI1A-208ENST00000494728 BCL2L14Q9BZR8 327 aa9.91□□□□□ -0.82
VTI1A-208ENST00000494728 OR2H1Q9GZK4 316 aa9.91□□□□□ -0.82
VTI1A-208ENST00000494728 C1orf198Q9H425 327 aa9.91□□□□□ -0.82
VTI1A-208ENST00000494728 EMC7Q9NPA0 242 aa9.91□□□□□ -0.82
VTI1A-208ENST00000494728 GID8Q9NWU2 228 aa9.91□□□□□ -0.82
VTI1A-208ENST00000494728 DCAF16Q9NXF7 216 aa9.91□□□□□ -0.82
VTI1A-208ENST00000494728 A0A1W2PPL8 197 aa9.9□□□□□ -0.82
VTI1A-208ENST00000494728 SLC22A23A1A5C7 686 aa9.9□□□□□ -0.82
VTI1A-208ENST00000494728 C5orf49A4QMS7 147 aa9.9□□□□□ -0.82
VTI1A-208ENST00000494728 B4DSR2 109 aa9.9□□□□□ -0.82
VTI1A-208ENST00000494728 CXCR6O00574 342 aa9.9□□□□□ -0.82
VTI1A-208ENST00000494728 ENTPD5O75356 428 aa9.9□□□□□ -0.82
VTI1A-208ENST00000494728 DEAF1O75398 565 aaPredicted RBP9.9□□□□□ -0.82
VTI1A-208ENST00000494728 ZNF682O95780 498 aa9.9□□□□□ -0.82
VTI1A-208ENST00000494728 AVPP01185 164 aa9.9□□□□□ -0.82
VTI1A-208ENST00000494728 IFNA14P01570 189 aa9.9□□□□□ -0.82
VTI1A-208ENST00000494728 IGHV1-46P01743 117 aa9.9□□□□□ -0.82
VTI1A-208ENST00000494728 IGHV3-13P01766 116 aa9.9□□□□□ -0.82
VTI1A-208ENST00000494728 IFNW1P05000 195 aa9.9□□□□□ -0.82
VTI1A-208ENST00000494728 MSMBP08118 114 aa9.9□□□□□ -0.82
VTI1A-208ENST00000494728 NCK1P16333 377 aa9.9□□□□□ -0.82
VTI1A-208ENST00000494728 MRPS11P82912 194 aaKnown RBP9.9□□□□□ -0.82
VTI1A-208ENST00000494728 MVKQ03426 396 aa9.9□□□□□ -0.82
VTI1A-208ENST00000494728 PLP2Q04941 152 aa9.9□□□□□ -0.82
VTI1A-208ENST00000494728 TSTQ16762 297 aaKnown RBP9.9□□□□□ -0.82
VTI1A-208ENST00000494728 THEM4Q5T1C6 240 aa9.9□□□□□ -0.82
VTI1A-208ENST00000494728 FAM27BQ5VT28 67 aa9.9□□□□□ -0.82
VTI1A-208ENST00000494728 ZNF774Q6NX45 483 aa9.9□□□□□ -0.82
VTI1A-208ENST00000494728 USP51Q70EK9 711 aa9.9□□□□□ -0.82
VTI1A-208ENST00000494728 CBLL1Q75N03 491 aa9.9□□□□□ -0.82
VTI1A-208ENST00000494728 FAM86B1Q8N7N1 296 aa9.9□□□□□ -0.82
VTI1A-208ENST00000494728 ABHD4Q8TB40 342 aa9.9□□□□□ -0.82
VTI1A-208ENST00000494728 SNX33Q8WV41 574 aa9.9□□□□□ -0.82
VTI1A-208ENST00000494728 TMEM186Q96B77 213 aa9.9□□□□□ -0.82
VTI1A-208ENST00000494728 Q96M85 177 aa9.9□□□□□ -0.82
VTI1A-208ENST00000494728 ZNF416Q9BWM5 594 aa9.9□□□□□ -0.82
VTI1A-208ENST00000494728 OR2J1Q9GZK6 312 aa9.9□□□□□ -0.82
VTI1A-208ENST00000494728 CCNB1IP1Q9NPC3 277 aa9.9□□□□□ -0.82
VTI1A-208ENST00000494728 HIF1ANQ9NWT6 349 aa9.9□□□□□ -0.82
VTI1A-208ENST00000494728 IGHV1-69-2A0A0G2JMI3 117 aa9.89□□□□□ -0.83
VTI1A-208ENST00000494728 EFCAB9A8MZ26 197 aa9.89□□□□□ -0.83
VTI1A-208ENST00000494728 SLC22A2O15244 555 aa9.89□□□□□ -0.83
VTI1A-208ENST00000494728 SERPINA1P01009 418 aa9.89□□□□□ -0.83
VTI1A-208ENST00000494728 TFP02787 698 aa9.89□□□□□ -0.83
VTI1A-208ENST00000494728 CST2P09228 141 aa9.89□□□□□ -0.83
VTI1A-208ENST00000494728 CTLA4P16410 223 aa9.89□□□□□ -0.83
VTI1A-208ENST00000494728 SRP14P37108 136 aaKnown RBP9.89□□□□□ -0.83
VTI1A-208ENST00000494728 RAD52P43351 418 aa9.89□□□□□ -0.83
VTI1A-208ENST00000494728 SLC9A3P48764 834 aa9.89□□□□□ -0.83
VTI1A-208ENST00000494728 ERFP50548 548 aa9.89□□□□□ -0.83
VTI1A-208ENST00000494728 TMEM33P57088 247 aa9.89□□□□□ -0.83
VTI1A-208ENST00000494728 FXYD6P3P58550 94 aa9.89□□□□□ -0.83
VTI1A-208ENST00000494728 TRAM2Q15035 370 aa9.89□□□□□ -0.83
VTI1A-208ENST00000494728 IFI44LQ53G44 452 aa9.89□□□□□ -0.83
VTI1A-208ENST00000494728 TMEM154Q6P9G4 183 aa9.89□□□□□ -0.83
VTI1A-208ENST00000494728 THSD4Q6ZMP0 1018 aa9.89□□□□□ -0.83
VTI1A-208ENST00000494728 MBOAT2Q6ZWT7 520 aa9.89□□□□□ -0.83
VTI1A-208ENST00000494728 ZNF771Q7L3S4 317 aaPredicted RBP9.89□□□□□ -0.83
VTI1A-208ENST00000494728 FAM122BQ7Z309 247 aa9.89□□□□□ -0.83
VTI1A-208ENST00000494728 GLCCI1Q86VQ1 547 aa9.89□□□□□ -0.83
VTI1A-208ENST00000494728 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.89□□□□□ -0.83
VTI1A-208ENST00000494728 SEMA6DQ8NFY4 1073 aa9.89□□□□□ -0.83
VTI1A-208ENST00000494728 OR1J2Q8NGS2 313 aa9.89□□□□□ -0.83
VTI1A-208ENST00000494728 RP9Q8TA86 221 aaKnown RBP9.89□□□□□ -0.83
VTI1A-208ENST00000494728 SLC7A13Q8TCU3 470 aa9.89□□□□□ -0.83
VTI1A-208ENST00000494728 KLF14Q8TD94 323 aaPredicted RBP9.89□□□□□ -0.83
VTI1A-208ENST00000494728 GEMIN6Q8WXD5 167 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms