RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 SMCPP49901 116 aaPredicted RBP6.02□□□□□ -1.45
MSH5-217ENST00000494458 MEOX1P50221 254 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 RORCP51449 518 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 MMP16P51512 607 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 FMODQ06828 376 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 ALKBH1Q13686 389 aaKnown RBP6.02□□□□□ -1.45
MSH5-217ENST00000494458 SLC10A1Q14973 349 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 NRN1LQ496H8 165 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 TP53I3Q53FA7 332 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 YIF1BQ5BJH7 314 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 CEP78Q5JTW2 689 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 HBMQ6B0K9 141 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 SLC18B1Q6NT16 456 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 RPUSD3Q6P087 351 aaKnown RBP6.02□□□□□ -1.45
MSH5-217ENST00000494458 PAMR1Q6UXH9 720 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 RPTNQ6XPR3 784 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 Q6ZSR3 168 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 ZNF627Q7L945 461 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 GALNTL5Q7Z4T8 443 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 CCDC190Q86UF4 302 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 SLC22A16Q86VW1 577 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 TPRA1Q86W33 373 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 GHDCQ8N2G8 530 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 FAM109AQ8N4B1 249 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 ZFP41Q8N8Y5 198 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 SYT14Q8NB59 555 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 TMEM178AQ8NBL3 297 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 IL17RDQ8NFM7 739 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 OR10D3Q8NH80 312 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 NEIL3Q8TAT5 605 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 SNX33Q8WV41 574 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 RGP1Q92546 391 aaPredicted RBP6.02□□□□□ -1.45
MSH5-217ENST00000494458 NABP1Q96AH0 204 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 DNAJA3Q96EY1 480 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 SFXN2Q96NB2 322 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 ZNF385AQ96PM9 386 aaKnown RBP6.02□□□□□ -1.45
MSH5-217ENST00000494458 TBX5Q99593 518 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 SOSTQ9BQB4 213 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 ABHD6Q9BV23 337 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 EMC6Q9BV81 110 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 KCNN2Q9H2S1 579 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 BCO1Q9HAY6 547 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 GP6Q9HCN6 339 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 TIGARQ9NQ88 270 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 ACOXLQ9NUZ1 547 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 SLCO1C1Q9NYB5 712 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 GLTPQ9NZD2 209 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 FRRS1LQ9P0K9 344 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 LAMP5Q9UJQ1 280 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 B3GNT3Q9Y2A9 372 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 ZNF281Q9Y2X9 895 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 MSRB2Q9Y3D2 182 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 FREM2Q5SZK8 3169 aa6.02□□□□□ -1.45
MSH5-217ENST00000494458 CNTRLQ7Z7A1 2325 aa6.01□□□□□ -1.45
MSH5-217ENST00000494458 TRBV5-7A0A0A0MS05 114 aa6.01□□□□□ -1.45
MSH5-217ENST00000494458 TRAV17A0A0B4J275 112 aa6.01□□□□□ -1.45
MSH5-217ENST00000494458 A0A0G2JK05 382 aa6.01□□□□□ -1.45
MSH5-217ENST00000494458 ZNF726A6NNF4 738 aa6.01□□□□□ -1.45
MSH5-217ENST00000494458 CLDN25C9JDP6 229 aa6.01□□□□□ -1.45
MSH5-217ENST00000494458 RPL36A-HNRNPH2H7BZ11 118 aa6.01□□□□□ -1.45
MSH5-217ENST00000494458 TAF4O00268 1085 aa6.01□□□□□ -1.45
MSH5-217ENST00000494458 DVL2O14641 736 aa6.01□□□□□ -1.45
MSH5-217ENST00000494458 PIN1P1O15428 100 aa6.01□□□□□ -1.45
MSH5-217ENST00000494458 CXCL13O43927 109 aa6.01□□□□□ -1.45
MSH5-217ENST00000494458 TRAPPC6AO75865 159 aa6.01□□□□□ -1.45
MSH5-217ENST00000494458 ZFPL1O95159 310 aa6.01□□□□□ -1.45
MSH5-217ENST00000494458 MPZL1O95297 269 aa6.01□□□□□ -1.45
MSH5-217ENST00000494458 PNPP00491 289 aa6.01□□□□□ -1.45
MSH5-217ENST00000494458 F10P00742 488 aa6.01□□□□□ -1.45
MSH5-217ENST00000494458 RAF1P04049 648 aa6.01□□□□□ -1.45
MSH5-217ENST00000494458 KRT8P05787 483 aa6.01□□□□□ -1.45
MSH5-217ENST00000494458 QDPRP09417 244 aa6.01□□□□□ -1.45
MSH5-217ENST00000494458 CD8BP10966 210 aa6.01□□□□□ -1.45
MSH5-217ENST00000494458 POU3F2P20265 443 aaPredicted RBP6.01□□□□□ -1.45
MSH5-217ENST00000494458 LORP23490 312 aaPredicted RBP6.01□□□□□ -1.45
MSH5-217ENST00000494458 CFL1P23528 166 aaKnown RBP6.01□□□□□ -1.45
MSH5-217ENST00000494458 OTX1P32242 354 aaPredicted RBP6.01□□□□□ -1.45
MSH5-217ENST00000494458 GDI2P50395 445 aaKnown RBP6.01□□□□□ -1.45
MSH5-217ENST00000494458 CCL11P51671 97 aa6.01□□□□□ -1.45
MSH5-217ENST00000494458 CLDN17P56750 224 aa6.01□□□□□ -1.45
MSH5-217ENST00000494458 PPIAP62937 165 aaKnown RBP6.01□□□□□ -1.45
MSH5-217ENST00000494458 MRPS34P82930 218 aaKnown RBP6.01□□□□□ -1.45
MSH5-217ENST00000494458 RASGEF1BQ0VAM2 473 aa6.01□□□□□ -1.45
MSH5-217ENST00000494458 CAMK2DQ13557 499 aa6.01□□□□□ -1.45
MSH5-217ENST00000494458 MEP1BQ16820 701 aa6.01□□□□□ -1.45
MSH5-217ENST00000494458 KRTAP27-1Q3LI81 207 aa6.01□□□□□ -1.45
MSH5-217ENST00000494458 ACSM3Q53FZ2 586 aa6.01□□□□□ -1.45
MSH5-217ENST00000494458 ZMAT1Q5H9K5 638 aa6.01□□□□□ -1.45
MSH5-217ENST00000494458 PHYHD1Q5SRE7 291 aa6.01□□□□□ -1.45
MSH5-217ENST00000494458 PDSS1Q5T2R2 415 aa6.01□□□□□ -1.45
MSH5-217ENST00000494458 FAM27BQ5VT28 67 aa6.01□□□□□ -1.45
MSH5-217ENST00000494458 C22orf42Q6IC83 251 aa6.01□□□□□ -1.45
MSH5-217ENST00000494458 KCTD18Q6PI47 426 aaPredicted RBP6.01□□□□□ -1.45
MSH5-217ENST00000494458 Q6ZS92 163 aa6.01□□□□□ -1.45
MSH5-217ENST00000494458 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.01□□□□□ -1.45
MSH5-217ENST00000494458 NR2C2APQ86WQ0 139 aa6.01□□□□□ -1.45
MSH5-217ENST00000494458 CATSPERDQ86XM0 798 aa6.01□□□□□ -1.45
MSH5-217ENST00000494458 CROCCP3Q8IVE0 287 aa6.01□□□□□ -1.45
MSH5-217ENST00000494458 SIAH3Q8IW03 269 aa6.01□□□□□ -1.45
MSH5-217ENST00000494458 PRSS35Q8N3Z0 413 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms