RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 ZNF81P51508 661 aa12.4□□□□□ -0.42
VCP-207ENST00000493886 C17orf67Q0P5P2 114 aa12.4□□□□□ -0.42
VCP-207ENST00000493886 MFSD13AQ14CX5 517 aa12.4□□□□□ -0.42
VCP-207ENST00000493886 TMEM255AQ5JRV8 349 aa12.4□□□□□ -0.42
VCP-207ENST00000493886 PEAR1Q5VY43 1037 aaPredicted RBP12.4□□□□□ -0.42
VCP-207ENST00000493886 SLC6A19Q695T7 634 aa12.4□□□□□ -0.42
VCP-207ENST00000493886 ZNF767PQ75MW2 155 aa12.4□□□□□ -0.42
VCP-207ENST00000493886 CDC20BQ86Y33 519 aa12.4□□□□□ -0.42
VCP-207ENST00000493886 MAML2Q8IZL2 1156 aaPredicted RBP12.4□□□□□ -0.42
VCP-207ENST00000493886 STK35Q8TDR2 534 aa12.4□□□□□ -0.42
VCP-207ENST00000493886 TMEM234Q8WY98 164 aa12.4□□□□□ -0.42
VCP-207ENST00000493886 HGDQ93099 445 aa12.4□□□□□ -0.42
VCP-207ENST00000493886 DPCDQ9BVM2 203 aaPredicted RBP12.4□□□□□ -0.42
VCP-207ENST00000493886 NOX4Q9NPH5 578 aa12.4□□□□□ -0.42
VCP-207ENST00000493886 RCE1Q9Y256 329 aa12.4□□□□□ -0.42
VCP-207ENST00000493886 C7orf66A4D0T2 115 aa12.4□□□□□ -0.42
VCP-207ENST00000493886 ANKUB1A6NFN9 424 aa12.4□□□□□ -0.42
VCP-207ENST00000493886 ZNF593O00488 134 aaPredicted RBP12.4□□□□□ -0.42
VCP-207ENST00000493886 GMDSO60547 372 aa12.4□□□□□ -0.42
VCP-207ENST00000493886 AHSA1O95433 338 aa12.4□□□□□ -0.42
VCP-207ENST00000493886 HPXP02790 462 aa12.4□□□□□ -0.42
VCP-207ENST00000493886 FCER2P06734 321 aa12.4□□□□□ -0.42
VCP-207ENST00000493886 OR8G3PP0DMU2 310 aa12.4□□□□□ -0.42
VCP-207ENST00000493886 GDNFP39905 211 aa12.4□□□□□ -0.42
VCP-207ENST00000493886 NANOS3P60323 173 aaKnown RBP12.4□□□□□ -0.42
VCP-207ENST00000493886 SNTB2Q13425 540 aaKnown RBP12.4□□□□□ -0.42
VCP-207ENST00000493886 POU4F3Q15319 338 aa12.4□□□□□ -0.42
VCP-207ENST00000493886 PDSS1Q5T2R2 415 aa12.4□□□□□ -0.42
VCP-207ENST00000493886 OTPQ5XKR4 325 aa12.4□□□□□ -0.42
VCP-207ENST00000493886 UNQ9370/PRO34162Q6UXP9 181 aa12.4□□□□□ -0.42
VCP-207ENST00000493886 FAM220AQ7Z4H9 259 aa12.4□□□□□ -0.42
VCP-207ENST00000493886 RNF166Q96A37 237 aaPredicted RBP12.4□□□□□ -0.42
VCP-207ENST00000493886 CFAP54Q96N23 3096 aa12.39□□□□□ -0.43
VCP-207ENST00000493886 A0A1B0GWJ7 208 aa12.39□□□□□ -0.43
VCP-207ENST00000493886 TRABD2BA6NFA1 517 aa12.39□□□□□ -0.43
VCP-207ENST00000493886 CLN5O75503 358 aa12.39□□□□□ -0.43
VCP-207ENST00000493886 DXOO77932 396 aaKnown RBP12.39□□□□□ -0.43
VCP-207ENST00000493886 UBL3O95164 117 aa12.39□□□□□ -0.43
VCP-207ENST00000493886 TACSTD2P09758 323 aa12.39□□□□□ -0.43
VCP-207ENST00000493886 H2AFB2P0C5Z0 115 aa12.39□□□□□ -0.43
VCP-207ENST00000493886 RPL27P61353 136 aaKnown RBP12.39□□□□□ -0.43
VCP-207ENST00000493886 ACKR1Q16570 336 aa12.39□□□□□ -0.43
VCP-207ENST00000493886 ODF4Q2M2E3 257 aa12.39□□□□□ -0.43
VCP-207ENST00000493886 ZBTB37Q5TC79 503 aa12.39□□□□□ -0.43
VCP-207ENST00000493886 TMEM205Q6UW68 189 aa12.39□□□□□ -0.43
VCP-207ENST00000493886 LUZP2Q86TE4 346 aa12.39□□□□□ -0.43
VCP-207ENST00000493886 ZNF680Q8NEM1 530 aa12.39□□□□□ -0.43
VCP-207ENST00000493886 OR5L2Q8NGL0 311 aa12.39□□□□□ -0.43
VCP-207ENST00000493886 OR6N2Q8NGY6 317 aa12.39□□□□□ -0.43
VCP-207ENST00000493886 ACTR6Q9GZN1 396 aa12.39□□□□□ -0.43
VCP-207ENST00000493886 TSPAN10Q9H1Z9 355 aaPredicted RBP12.39□□□□□ -0.43
VCP-207ENST00000493886 SLC26A1Q9H2B4 701 aa12.39□□□□□ -0.43
VCP-207ENST00000493886 AKIRIN1Q9H9L7 192 aaPredicted RBP12.39□□□□□ -0.43
VCP-207ENST00000493886 MRM2Q9UI43 246 aaKnown RBP12.39□□□□□ -0.43
VCP-207ENST00000493886 ZNF281Q9Y2X9 895 aa12.39□□□□□ -0.43
VCP-207ENST00000493886 PCDHGA9Q9Y5G4 932 aaKnown RBP12.39□□□□□ -0.43
VCP-207ENST00000493886 NUBP2Q9Y5Y2 271 aa12.39□□□□□ -0.43
VCP-207ENST00000493886 TTLL8A6PVC2 850 aa12.39□□□□□ -0.43
VCP-207ENST00000493886 AKR7A3O95154 331 aa12.39□□□□□ -0.43
VCP-207ENST00000493886 OR6A2O95222 327 aa12.39□□□□□ -0.43
VCP-207ENST00000493886 PER3P56645 1201 aa12.39□□□□□ -0.43
VCP-207ENST00000493886 HSD17B12Q53GQ0 312 aa12.39□□□□□ -0.43
VCP-207ENST00000493886 STPG1Q5TH74 334 aa12.39□□□□□ -0.43
VCP-207ENST00000493886 C5orf46Q6UWT4 87 aa12.39□□□□□ -0.43
VCP-207ENST00000493886 CMTM4Q8IZR5 234 aa12.39□□□□□ -0.43
VCP-207ENST00000493886 ST8SIA1Q92185 356 aa12.39□□□□□ -0.43
VCP-207ENST00000493886 NPAS1Q99742 590 aa12.39□□□□□ -0.43
VCP-207ENST00000493886 WDR76Q9H967 626 aa12.39□□□□□ -0.43
VCP-207ENST00000493886 EIF3KQ9UBQ5 218 aaKnown RBP12.39□□□□□ -0.43
VCP-207ENST00000493886 CIB4A0PJX0 185 aa12.38□□□□□ -0.43
VCP-207ENST00000493886 PLPP3O14495 311 aa12.38□□□□□ -0.43
VCP-207ENST00000493886 OR2T1O43869 369 aa12.38□□□□□ -0.43
VCP-207ENST00000493886 GDF9O60383 454 aa12.38□□□□□ -0.43
VCP-207ENST00000493886 ZFPL1O95159 310 aa12.38□□□□□ -0.43
VCP-207ENST00000493886 GPANK1O95872 356 aa12.38□□□□□ -0.43
VCP-207ENST00000493886 FGF5P12034 268 aa12.38□□□□□ -0.43
VCP-207ENST00000493886 G0S2P27469 103 aa12.38□□□□□ -0.43
VCP-207ENST00000493886 RPS27P42677 84 aaKnown RBP12.38□□□□□ -0.43
VCP-207ENST00000493886 LIPNQ5VXI9 398 aa12.38□□□□□ -0.43
VCP-207ENST00000493886 DPY19L4Q7Z388 723 aa12.38□□□□□ -0.43
VCP-207ENST00000493886 ZNF417Q8TAU3 575 aa12.38□□□□□ -0.43
VCP-207ENST00000493886 ZNF519Q8TB69 540 aa12.38□□□□□ -0.43
VCP-207ENST00000493886 PHYHIPQ92561 330 aa12.38□□□□□ -0.43
VCP-207ENST00000493886 KLHL15Q96M94 604 aa12.38□□□□□ -0.43
VCP-207ENST00000493886 ZNF587Q96SQ5 575 aaPredicted RBP12.38□□□□□ -0.43
VCP-207ENST00000493886 INTS14Q96SY0 518 aa12.38□□□□□ -0.43
VCP-207ENST00000493886 OR10A4Q9H209 315 aa12.38□□□□□ -0.43
VCP-207ENST00000493886 TXNIPQ9H3M7 391 aa12.38□□□□□ -0.43
VCP-207ENST00000493886 PPP1R14DQ9NXH3 145 aa12.38□□□□□ -0.43
VCP-207ENST00000493886 MED11Q9P086 117 aa12.38□□□□□ -0.43
VCP-207ENST00000493886 C19orf25Q9UFG5 118 aaPredicted RBP12.38□□□□□ -0.43
VCP-207ENST00000493886 PRSS37A4D1T9 235 aa12.38□□□□□ -0.43
VCP-207ENST00000493886 GPR171O14626 319 aa12.38□□□□□ -0.43
VCP-207ENST00000493886 UPK3AO75631 287 aa12.38□□□□□ -0.43
VCP-207ENST00000493886 ZFAND5O76080 213 aa12.38□□□□□ -0.43
VCP-207ENST00000493886 ABHD16AO95870 558 aa12.38□□□□□ -0.43
VCP-207ENST00000493886 SOX2P48431 317 aa12.38□□□□□ -0.43
VCP-207ENST00000493886 VEGFCP49767 419 aa12.38□□□□□ -0.43
VCP-207ENST00000493886 SUMO3P55854 103 aaPredicted RBP12.38□□□□□ -0.43
VCP-207ENST00000493886 GSG1Q2KHT4 349 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms