RNA–Protein interactions for RNA: ENST00000493662.6

MSH5-SAPCD1-207, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene MSH5-SAPCD1, Length 3,991 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-207ENST00000493662 OR14K1Q8NGZ2 314 aa9.79□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 GPBAR1Q8TDU6 330 aa9.79□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 CA5BP1Q8WTZ4 195 aa9.79□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 WDR34Q96EX3 536 aa9.79□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 SULT4A1Q9BR01 284 aa9.79□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 COMMD4Q9H0A8 199 aa9.79□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 APMAPQ9HDC9 416 aa9.79□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 CKLFQ9UBR5 152 aa9.79□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 CTNSO60931 367 aa9.79□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 PIAS2O75928 621 aa9.79□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 TSPAN15O95858 294 aa9.79□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 NMBP08949 121 aa9.79□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 MAGEB1P43366 347 aa9.79□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 SLC6A9P48067 706 aa9.79□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 TSPAN31Q12999 210 aa9.79□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 GSG1Q2KHT4 349 aa9.79□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 RAET1LQ5VY80 246 aa9.79□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 OVCH2Q7RTZ1 564 aa9.79□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 NUP54Q7Z3B4 507 aa9.79□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 STT3BQ8TCJ2 826 aa9.79□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 EMC6Q9BV81 110 aa9.79□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 ULBP3Q9BZM4 244 aa9.79□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 ZNF700Q9H0M5 742 aa9.79□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 ANKRD19PQ9H560 264 aa9.79□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 CYSLTR2Q9NS75 346 aa9.79□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 LAMP5Q9UJQ1 280 aa9.79□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 PIEZO2Q9H5I5 2752 aa9.79□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 TMEM200CA6NKL6 621 aa9.79□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 SLC22A31A6NKX4 558 aa9.79□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 H7C1Q1 480 aa9.79□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 NID1P14543 1247 aa9.79□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 NME1P15531 152 aaKnown RBP9.79□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 CNR1P21554 472 aa9.79□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 RFC3P40938 356 aa9.79□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 KIAA0141Q14154 515 aaPredicted RBP9.79□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 RBMS2Q15434 407 aaKnown RBP9.79□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 OR7A5Q15622 319 aa9.79□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 ALG10Q5BKT4 473 aa9.79□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 FAAP20Q6NZ36 180 aa9.79□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 PPP1R3BQ86XI6 285 aa9.79□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 IL22RA1Q8N6P7 574 aa9.79□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 STEAP2Q8NFT2 490 aa9.79□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 SYNPRQ8TBG9 265 aa9.79□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 ELP5Q8TE02 316 aa9.79□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 KDM4EB2RXH2 506 aaPredicted RBP9.78□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 IDSB3KWA1 339 aa9.78□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 LMO7DNF2Z398 122 aa9.78□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 GPANK1O95872 356 aa9.78□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 ATP1B1P05026 303 aa9.78□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 ZNF823P16415 610 aa9.78□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 CCNOP22674 350 aa9.78□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 ADH6P28332 368 aa9.78□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 OR10A3P58181 314 aa9.78□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 C3orf33Q6P1S2 294 aa9.78□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 KIRREL2Q6UWL6 708 aa9.78□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 ZNF561Q8N587 486 aa9.78□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 FAM26EQ8N5C1 309 aa9.78□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 FBLIM1Q8WUP2 373 aa9.78□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 SCMH1Q96GD3 660 aa9.78□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 PDCD1LG2Q9BQ51 273 aa9.78□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 PIGQQ9BRB3 760 aa9.78□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 ACOD1A6NK06 481 aa9.78□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 CRYBA1P05813 215 aa9.78□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 OR8G3PP0DMU2 310 aa9.78□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 POU3F2P20265 443 aaPredicted RBP9.78□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 PTAFRP25105 342 aa9.78□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 HLA-BQ31612 363 aa9.78□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 CAMKMTQ7Z624 323 aa9.78□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 OR52I2Q8NH67 350 aa9.78□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 SFXN5Q8TD22 340 aa9.78□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 THAP4Q8WY91 577 aa9.78□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 PTDSS2Q9BVG9 487 aa9.78□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 CHRDQ9H2X0 955 aa9.78□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 CCDC86Q9H6F5 360 aaKnown RBP9.78□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 ACKR4Q9NPB9 350 aa9.78□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 ISYNA1Q9NPH2 558 aa9.78□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 A0A0B4J2A0 478 aa9.78□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 UTS2O95399 124 aa9.78□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 RENP00797 406 aa9.78□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 MBP02144 154 aa9.78□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 HPXP02790 462 aa9.78□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 OR10K2Q6IF99 312 aa9.78□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 TMEM71Q6P5X7 295 aa9.78□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 TMEM205Q6UW68 189 aa9.78□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 SPEM1Q8N4L4 309 aa9.78□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 TMEM99Q8N816 258 aa9.78□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 OR1L3Q8NH93 324 aa9.78□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 GOT1L1Q8NHS2 421 aaPredicted RBP9.78□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 ABHD4Q8TB40 342 aa9.78□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 RNF141Q8WVD5 230 aa9.78□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 ENKD1Q9H0I2 346 aa9.78□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 KCNJ16Q9NPI9 418 aa9.78□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 SHPKQ9UHJ6 478 aa9.78□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 CHST2Q9Y4C5 530 aa9.78□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 WDFY4Q6ZS81 3184 aa9.78□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 SPTBN1Q01082 2364 aaKnown RBP9.77□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 CXorf51AA0A1B0GTR3 108 aa9.77□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 TMEM72A0PK05 275 aa9.77□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 SERINC4A6NH21 518 aa9.77□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 ICOSLGO75144 302 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms