RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 SEPHS2Q99611 448 aa9.16□□□□□ -0.94
COL6A3-214ENST00000493608 BPESC1Q9GZL8 116 aa9.16□□□□□ -0.94
COL6A3-214ENST00000493608 KCNN2Q9H2S1 579 aa9.16□□□□□ -0.94
COL6A3-214ENST00000493608 SIAEQ9HAT2 523 aa9.16□□□□□ -0.94
COL6A3-214ENST00000493608 CDH20Q9HBT6 801 aa9.16□□□□□ -0.94
COL6A3-214ENST00000493608 SPAG4Q9NPE6 437 aa9.16□□□□□ -0.94
COL6A3-214ENST00000493608 DCAF13Q9NV06 445 aaKnown RBP9.16□□□□□ -0.94
COL6A3-214ENST00000493608 REV1Q9UBZ9 1251 aa9.16□□□□□ -0.94
COL6A3-214ENST00000493608 SLC7A8Q9UHI5 535 aa9.16□□□□□ -0.94
COL6A3-214ENST00000493608 RPS6KA6Q9UK32 745 aa9.16□□□□□ -0.94
COL6A3-214ENST00000493608 UGT2A1Q9Y4X1 527 aa9.16□□□□□ -0.94
COL6A3-214ENST00000493608 ENPP4Q9Y6X5 453 aa9.16□□□□□ -0.94
COL6A3-214ENST00000493608 CUBNO60494 3623 aa9.16□□□□□ -0.94
COL6A3-214ENST00000493608 SVEP1Q4LDE5 3571 aa9.15□□□□□ -0.94
COL6A3-214ENST00000493608 IQCMA0A1B0GVH7 501 aa9.15□□□□□ -0.94
COL6A3-214ENST00000493608 A0A1W2PPL8 197 aa9.15□□□□□ -0.94
COL6A3-214ENST00000493608 LOC390937A0A1W2PQ73 354 aa9.15□□□□□ -0.94
COL6A3-214ENST00000493608 LRP5LA4QPB2 252 aa9.15□□□□□ -0.94
COL6A3-214ENST00000493608 CENPBD1B2RD01 187 aa9.15□□□□□ -0.94
COL6A3-214ENST00000493608 NDUFAB1O14561 156 aa9.15□□□□□ -0.94
COL6A3-214ENST00000493608 SYNGR3O43761 229 aa9.15□□□□□ -0.94
COL6A3-214ENST00000493608 ENTPD5O75356 428 aa9.15□□□□□ -0.94
COL6A3-214ENST00000493608 STAMBPO95630 424 aa9.15□□□□□ -0.94
COL6A3-214ENST00000493608 SCG5P05408 212 aa9.15□□□□□ -0.94
COL6A3-214ENST00000493608 LCKP06239 509 aa9.15□□□□□ -0.94
COL6A3-214ENST00000493608 MMP7P09237 267 aaPredicted RBP9.15□□□□□ -0.94
COL6A3-214ENST00000493608 NAT2P11245 290 aa9.15□□□□□ -0.94
COL6A3-214ENST00000493608 ZNF16P17020 682 aaPredicted RBP9.15□□□□□ -0.94
COL6A3-214ENST00000493608 ZNF26P17031 533 aaPredicted RBP9.15□□□□□ -0.94
COL6A3-214ENST00000493608 ZNF32P17041 273 aa9.15□□□□□ -0.94
COL6A3-214ENST00000493608 RPL4P36578 427 aaKnown RBP9.15□□□□□ -0.94
COL6A3-214ENST00000493608 SLC9A3P48764 834 aa9.15□□□□□ -0.94
COL6A3-214ENST00000493608 ZNF133P52736 654 aaPredicted RBP9.15□□□□□ -0.94
COL6A3-214ENST00000493608 MRPS34P82930 218 aaKnown RBP9.15□□□□□ -0.94
COL6A3-214ENST00000493608 VLDLRP98155 873 aa9.15□□□□□ -0.94
COL6A3-214ENST00000493608 HSF2Q03933 536 aa9.15□□□□□ -0.94
COL6A3-214ENST00000493608 ZBED5Q49AG3 693 aa9.15□□□□□ -0.94
COL6A3-214ENST00000493608 PABPC1L2AQ5JQF8 200 aa9.15□□□□□ -0.94
COL6A3-214ENST00000493608 FGD3Q5JSP0 725 aa9.15□□□□□ -0.94
COL6A3-214ENST00000493608 CYB5R2Q6BCY4 276 aa9.15□□□□□ -0.94
COL6A3-214ENST00000493608 RGS7BPQ6MZT1 257 aaPredicted RBP9.15□□□□□ -0.94
COL6A3-214ENST00000493608 ZNF519Q8TB69 540 aa9.15□□□□□ -0.94
COL6A3-214ENST00000493608 SLC7A13Q8TCU3 470 aa9.15□□□□□ -0.94
COL6A3-214ENST00000493608 UBASH3BQ8TF42 649 aa9.15□□□□□ -0.94
COL6A3-214ENST00000493608 NEU4Q8WWR8 484 aaPredicted RBP9.15□□□□□ -0.94
COL6A3-214ENST00000493608 C7orf34Q96L11 122 aa9.15□□□□□ -0.94
COL6A3-214ENST00000493608 Q96M85 177 aa9.15□□□□□ -0.94
COL6A3-214ENST00000493608 CDRT15Q96T59 188 aa9.15□□□□□ -0.94
COL6A3-214ENST00000493608 CCNB1IP1Q9NPC3 277 aa9.15□□□□□ -0.94
COL6A3-214ENST00000493608 NDUFAF4Q9P032 175 aa9.15□□□□□ -0.94
COL6A3-214ENST00000493608 TAAR3PQ9P1P4 343 aa9.15□□□□□ -0.94
COL6A3-214ENST00000493608 IL20RAQ9UHF4 553 aa9.15□□□□□ -0.94
COL6A3-214ENST00000493608 FBXL3Q9UKT7 428 aa9.15□□□□□ -0.94
COL6A3-214ENST00000493608 ADAM18Q9Y3Q7 739 aa9.15□□□□□ -0.94
COL6A3-214ENST00000493608 FAM32AQ9Y421 112 aaKnown RBP9.15□□□□□ -0.94
COL6A3-214ENST00000493608 TRBV4-1A0A0J9YWV2 114 aa9.14□□□□□ -0.95
COL6A3-214ENST00000493608 A0A1W2PPW3 197 aa9.14□□□□□ -0.95
COL6A3-214ENST00000493608 HTR3EA5X5Y0 456 aa9.14□□□□□ -0.95
COL6A3-214ENST00000493608 NPIPB13A6NJU9 1138 aa9.14□□□□□ -0.95
COL6A3-214ENST00000493608 NPIPB4C9JG80 1138 aa9.14□□□□□ -0.95
COL6A3-214ENST00000493608 M0R233 179 aa9.14□□□□□ -0.95
COL6A3-214ENST00000493608 IMPA2O14732 288 aa9.14□□□□□ -0.95
COL6A3-214ENST00000493608 MGRN1O60291 552 aa9.14□□□□□ -0.95
COL6A3-214ENST00000493608 GMNNO75496 209 aa9.14□□□□□ -0.95
COL6A3-214ENST00000493608 GHRHP01286 108 aa9.14□□□□□ -0.95
COL6A3-214ENST00000493608 IGHMP01871 453 aa9.14□□□□□ -0.95
COL6A3-214ENST00000493608 HPXP02790 462 aa9.14□□□□□ -0.95
COL6A3-214ENST00000493608 H1F0P07305 194 aaKnown RBP9.14□□□□□ -0.95
COL6A3-214ENST00000493608 ERCC1P07992 297 aaPredicted RBP9.14□□□□□ -0.95
COL6A3-214ENST00000493608 APEHP13798 732 aaKnown RBP9.14□□□□□ -0.95
COL6A3-214ENST00000493608 COL8A2P25067 703 aa9.14□□□□□ -0.95
COL6A3-214ENST00000493608 LAP3P28838 519 aa9.14□□□□□ -0.95
COL6A3-214ENST00000493608 APLNRP35414 380 aa9.14□□□□□ -0.95
COL6A3-214ENST00000493608 EVX1P49640 407 aa9.14□□□□□ -0.95
COL6A3-214ENST00000493608 UCP2P55851 309 aa9.14□□□□□ -0.95
COL6A3-214ENST00000493608 PSG4Q00888 419 aa9.14□□□□□ -0.95
COL6A3-214ENST00000493608 SEC23BQ15437 767 aa9.14□□□□□ -0.95
COL6A3-214ENST00000493608 TAF11Q15544 211 aa9.14□□□□□ -0.95
COL6A3-214ENST00000493608 TBC1D28Q2M2D7 210 aa9.14□□□□□ -0.95
COL6A3-214ENST00000493608 THEM4Q5T1C6 240 aa9.14□□□□□ -0.95
COL6A3-214ENST00000493608 OTPQ5XKR4 325 aa9.14□□□□□ -0.95
COL6A3-214ENST00000493608 TMPRSS11FQ6ZWK6 438 aa9.14□□□□□ -0.95
COL6A3-214ENST00000493608 PIGWQ7Z7B1 504 aa9.14□□□□□ -0.95
COL6A3-214ENST00000493608 HIPK1Q86Z02 1210 aa9.14□□□□□ -0.95
COL6A3-214ENST00000493608 ARIH2OSQ8N7S6 290 aa9.14□□□□□ -0.95
COL6A3-214ENST00000493608 OR1J2Q8NGS2 313 aa9.14□□□□□ -0.95
COL6A3-214ENST00000493608 RASD2Q96D21 266 aa9.14□□□□□ -0.95
COL6A3-214ENST00000493608 MSI2Q96DH6 328 aaKnown RBP9.14□□□□□ -0.95
COL6A3-214ENST00000493608 LRRC37BQ96QE4 947 aa9.14□□□□□ -0.95
COL6A3-214ENST00000493608 SOX7Q9BT81 388 aa9.14□□□□□ -0.95
COL6A3-214ENST00000493608 ALG12Q9BV10 488 aa9.14□□□□□ -0.95
COL6A3-214ENST00000493608 RERGLQ9H628 205 aa9.14□□□□□ -0.95
COL6A3-214ENST00000493608 STX18Q9P2W9 335 aaKnown RBP9.14□□□□□ -0.95
COL6A3-214ENST00000493608 GRHPRQ9UBQ7 328 aa9.14□□□□□ -0.95
COL6A3-214ENST00000493608 ARL2BPQ9Y2Y0 163 aa9.14□□□□□ -0.95
COL6A3-214ENST00000493608 LOC100509620A0A075B734 347 aa9.13□□□□□ -0.95
COL6A3-214ENST00000493608 TEX13CA0A0J9YWL9 993 aa9.13□□□□□ -0.95
COL6A3-214ENST00000493608 LOC100289279A0A1B0GTE1 492 aa9.13□□□□□ -0.95
COL6A3-214ENST00000493608 A0A1W2PRQ8 180 aa9.13□□□□□ -0.95
COL6A3-214ENST00000493608 C5orf49A4QMS7 147 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms